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The map label for this gene is xanB [H]

Identifier: 158338830

GI number: 158338830

Start: 5821362

End: 5821760

Strand: Reverse

Name: xanB [H]

Synonym: AM1_5743

Alternate gene names: 158338830

Gene position: 5821760-5821362 (Counterclockwise)

Preceding gene: 158338831

Following gene: 158338829

Centisome position: 89.51

GC content: 48.62

Gene sequence:

>399_bases
GTGGTCCAAACTCAACCATCTAACCTTTTAGCAGCACCTGTGCCTACCCACCAAGGTGTCGCTGCAACTGAACTGCGTCC
TTGGGGATCCTTTACGATTTTGGAAGAAGGCCAAGGCTATAAGATCAAGCGGATTGAGGTGAAGCCTGGACACCGTTTGA
GCTTGCAAATGCATCATCATCGGAGTGAGCATTGGATTGTGATTGCCGGTATCGCTAAAGTTGTGCGAGGCGAGGAAGAC
TTGATGCTGAGTGCGAATGAGTCTACCTATGTGCCTCGGTTTACCCAACATCGGCTGGAGAATCCTGGTATGGTGCCTTT
GGTTTTGATTGAGGTTCAAAACGGTGAGTATTTAGGCGAAGATGATATTGTGCGCTTTGATGACGATTACGCACGATAG

Upstream 100 bases:

>100_bases
AAATTATTCCTAGACGATTGGGGATTTTGGCCCGTCCTATCCTGATTAAGCAATTGTCTACTCATGCCAATGAAAAACCC
TATTGAGGTAAGTCGGAACC

Downstream 100 bases:

>100_bases
TCATTTGCGATTGGAATACTCAACTCAATATGATTCAACTCAGCCCTACTGCCATAGGTGAATTAAAACGCCTTCAAAGG
AAGCATTTACCAGGTGGCCA

Product: mannose-6-phosphate isomerase

Products: NA

Alternate protein names: Mannose-6-phosphate isomerase; Phosphohexomutase; Phosphomannose isomerase; PMI; Mannose-1-phosphate guanylyl transferase; GDP-mannose pyrophosphorylase; GMP; GMPP [H]

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MVQTQPSNLLAAPVPTHQGVAATELRPWGSFTILEEGQGYKIKRIEVKPGHRLSLQMHHHRSEHWIVIAGIAKVVRGEED
LMLSANESTYVPRFTQHRLENPGMVPLVLIEVQNGEYLGEDDIVRFDDDYAR

Sequences:

>Translated_132_residues
MVQTQPSNLLAAPVPTHQGVAATELRPWGSFTILEEGQGYKIKRIEVKPGHRLSLQMHHHRSEHWIVIAGIAKVVRGEED
LMLSANESTYVPRFTQHRLENPGMVPLVLIEVQNGEYLGEDDIVRFDDDYAR
>Mature_132_residues
MVQTQPSNLLAAPVPTHQGVAATELRPWGSFTILEEGQGYKIKRIEVKPGHRLSLQMHHHRSEHWIVIAGIAKVVRGEED
LMLSANESTYVPRFTQHRLENPGMVPLVLIEVQNGEYLGEDDIVRFDDDYAR

Specific function: Involved in xanthan production [H]

COG id: COG0662

COG function: function code G; Mannose-6-phosphate isomerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mannose-6-phosphate isomerase type 2 family [H]

Homologues:

Organism=Escherichia coli, GI1788362, Length=107, Percent_Identity=56.0747663551402, Blast_Score=132, Evalue=6e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR006375
- InterPro:   IPR001538
- InterPro:   IPR005835
- InterPro:   IPR014710 [H]

Pfam domain/function: PF01050 MannoseP_isomer; PF00483 NTP_transferase [H]

EC number: =5.3.1.8; =2.7.7.13 [H]

Molecular weight: Translated: 14979; Mature: 14979

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQTQPSNLLAAPVPTHQGVAATELRPWGSFTILEEGQGYKIKRIEVKPGHRLSLQMHHH
CCCCCCCCEEEECCCCCCCEEEEEECCCCCEEEEECCCCCEEEEEEECCCCEEEEEEECC
RSEHWIVIAGIAKVVRGEEDLMLSANESTYVPRFTQHRLENPGMVPLVLIEVQNGEYLGE
CCCCEEEEEEHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCCCEEEEEEEECCCCEECC
DDIVRFDDDYAR
CCEEECCCCCCC
>Mature Secondary Structure
MVQTQPSNLLAAPVPTHQGVAATELRPWGSFTILEEGQGYKIKRIEVKPGHRLSLQMHHH
CCCCCCCCEEEECCCCCCCEEEEEECCCCCEEEEECCCCCEEEEEEECCCCEEEEEEECC
RSEHWIVIAGIAKVVRGEEDLMLSANESTYVPRFTQHRLENPGMVPLVLIEVQNGEYLGE
CCCCEEEEEEHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCCCEEEEEEEECCCCEECC
DDIVRFDDDYAR
CCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1370280; 11589581 [H]