Click here to switch to the map view.

The map label for this gene is yfhF [C]

Identifier: 158338829

GI number: 158338829

Start: 5821006

End: 5821332

Strand: Reverse

Name: yfhF [C]

Synonym: AM1_5742

Alternate gene names: 158338829

Gene position: 5821332-5821006 (Counterclockwise)

Preceding gene: 158338830

Following gene: 158338827

Centisome position: 89.51

GC content: 47.71

Gene sequence:

>327_bases
ATGATTCAACTCAGCCCTACTGCCATAGGTGAATTAAAACGCCTTCAAAGGAAGCATTTACCAGGTGGCCAGCTCCGTAT
TGTGGTTGATGCCAGCGGCTGCAAAGGGTTAGCCTATCAAATGCAATTTGCTGAATCGCCCCAACCCGACGATCAAGTTT
TTGATTGTGAGGACATTCAGGTGGTTGTCGAAAAAGCAAGCATGAAATACCTCTCTGGTTTAACCCTGGACTATACCGAA
GATCTGATGGGGGGAGGATTCCGCTTCTACAACCCAAATGCGATTGAGACCTGTAGCTGCGGACATTCCTTTGCTATTGC
GGGGTAA

Upstream 100 bases:

>100_bases
TTGAGGTTCAAAACGGTGAGTATTTAGGCGAAGATGATATTGTGCGCTTTGATGACGATTACGCACGATAGTCATTTGCG
ATTGGAATACTCAACTCAAT

Downstream 100 bases:

>100_bases
ATACAACTGAATATTGCATTTTCCCTAGTAACGCTCTGTTGCTAGGGAAATTTTTAGGTCTATTCAGGGGTCCCTGGTGT
TGAACTGGGAGAGGGTTGGG

Product: iron-sulfur cluster assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MIQLSPTAIGELKRLQRKHLPGGQLRIVVDASGCKGLAYQMQFAESPQPDDQVFDCEDIQVVVEKASMKYLSGLTLDYTE
DLMGGGFRFYNPNAIETCSCGHSFAIAG

Sequences:

>Translated_108_residues
MIQLSPTAIGELKRLQRKHLPGGQLRIVVDASGCKGLAYQMQFAESPQPDDQVFDCEDIQVVVEKASMKYLSGLTLDYTE
DLMGGGFRFYNPNAIETCSCGHSFAIAG
>Mature_108_residues
MIQLSPTAIGELKRLQRKHLPGGQLRIVVDASGCKGLAYQMQFAESPQPDDQVFDCEDIQVVVEKASMKYLSGLTLDYTE
DLMGGGFRFYNPNAIETCSCGHSFAIAG

Specific function: Unknown

COG id: COG0316

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesB/iscA family [H]

Homologues:

Organism=Homo sapiens, GI52426768, Length=105, Percent_Identity=31.4285714285714, Blast_Score=71, Evalue=2e-13,
Organism=Homo sapiens, GI160420328, Length=83, Percent_Identity=36.144578313253, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1788877, Length=105, Percent_Identity=37.1428571428571, Blast_Score=86, Evalue=4e-19,
Organism=Escherichia coli, GI1786351, Length=106, Percent_Identity=33.9622641509434, Blast_Score=70, Evalue=3e-14,
Organism=Escherichia coli, GI1787974, Length=105, Percent_Identity=27.6190476190476, Blast_Score=62, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71998452, Length=95, Percent_Identity=37.8947368421053, Blast_Score=69, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI25146411, Length=105, Percent_Identity=32.3809523809524, Blast_Score=67, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI193209025, Length=105, Percent_Identity=32.3809523809524, Blast_Score=67, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6323001, Length=106, Percent_Identity=32.0754716981132, Blast_Score=72, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24649697, Length=96, Percent_Identity=39.5833333333333, Blast_Score=75, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000361
- InterPro:   IPR016092
- InterPro:   IPR017870 [H]

Pfam domain/function: PF01521 Fe-S_biosyn [H]

EC number: NA

Molecular weight: Translated: 11819; Mature: 11819

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: PS01152 HESB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQLSPTAIGELKRLQRKHLPGGQLRIVVDASGCKGLAYQMQFAESPQPDDQVFDCEDIQ
CEEECCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCEECCHHHH
VVVEKASMKYLSGLTLDYTEDLMGGGFRFYNPNAIETCSCGHSFAIAG
HHHHHHHHHHHCCCCCCCCHHHHCCCEEEECCCCCCEECCCCEEEECC
>Mature Secondary Structure
MIQLSPTAIGELKRLQRKHLPGGQLRIVVDASGCKGLAYQMQFAESPQPDDQVFDCEDIQ
CEEECCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCEECCHHHH
VVVEKASMKYLSGLTLDYTEDLMGGGFRFYNPNAIETCSCGHSFAIAG
HHHHHHHHHHHCCCCCCCCHHHHCCCEEEECCCCCCEECCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]