Click here to switch to the map view.

The map label for this gene is yfnE [H]

Identifier: 158338802

GI number: 158338802

Start: 5791325

End: 5792206

Strand: Reverse

Name: yfnE [H]

Synonym: AM1_5713

Alternate gene names: 158338802

Gene position: 5792206-5791325 (Counterclockwise)

Preceding gene: 158338803

Following gene: 158338801

Centisome position: 89.06

GC content: 47.51

Gene sequence:

>882_bases
ATGACTCTCCCTTCCCCAGATTTTATTTCGGTTATCGTTCCAGTCTTCAATGATACGGAGCGTTTGGCACAATGCTTATT
GGCCCTCGAGCAACAGACCTTTCACCAAGATTCCTATGAAGTCATAGTCGTCGATAATGCATCTGAAGATGATGTGCAGG
CTGTTGTTACCCATTTCCCCCACGCCAATGTCGTGATTGAGCCTCAGCGGGGGTCCTATGCTGCCCGAAATACTGGGATT
GCGATCGCAAAAGGAAACATCCTAGCGTTCACGGATGCAGACTGTATACCTGCCCCTGACTGGATTGAAAAAGGGGTTCA
GAGCTTACACGATACTCCCAACTGTGGTCTAGTGGCTGGCAGAATCGAATTCAGCTATCAAAATCCACAACAGCCAAACC
CCATTGAACTCTGTGATAGCGTGCTGTATTTACAGCAAGATTTGTATTTAAAACATGCCAAGTTTGGCGCTACGGCCAAT
GTCTTTACCTTTAAATCGGTCTTCCACAAAGTCGGTTTGTTTGATCAAACCCTGAAATCTGGTGGGGACTATGAATGGGG
ACAACGAGTGTTCAAGGCAGGGTATCCACAAGTCTATTCAGCAGAGGCTTTTGTCCATCACCCAGCTCGGCATTCCTTTG
CACAGCTTTACCAGAAAATCCTCAGAACAACCCGAGGCCCCTATGACTTGAGCCAGTCTAGTACCTACACCTTAAAGAAA
TTCATCAAGGATATTGTCAGAGATGTCTTCCCCCCTTTCAAGACCTTTGCTCGGGCACGGGTAGATACGGTCCACCAGAA
ACTGCAGCTGTGGCTTGTGTTGACCTTTATCAAGCATTTAACGGCGCTAGAGCGGGTGAAGGCACAACTCAAATTTGGCT
AG

Upstream 100 bases:

>100_bases
TGAATGCCCTACTTAAAAGATTGGGCACCCAGACTAAAGTCTCCTTGCAAGGACAACACTAGCTATCGGGTCGTATTTCT
AAAAAAGCACACACATAGCC

Downstream 100 bases:

>100_bases
TGGTTTCTGAGAAAGGTGCCAGTCCGGGTGAACGAAAACGTGAAGCTACAGATAGCCCATGTTGAATAGAAATCGCTATA
AACAGTATTTCATTTTATTG

Product: glycosyl transferase, group 2 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MTLPSPDFISVIVPVFNDTERLAQCLLALEQQTFHQDSYEVIVVDNASEDDVQAVVTHFPHANVVIEPQRGSYAARNTGI
AIAKGNILAFTDADCIPAPDWIEKGVQSLHDTPNCGLVAGRIEFSYQNPQQPNPIELCDSVLYLQQDLYLKHAKFGATAN
VFTFKSVFHKVGLFDQTLKSGGDYEWGQRVFKAGYPQVYSAEAFVHHPARHSFAQLYQKILRTTRGPYDLSQSSTYTLKK
FIKDIVRDVFPPFKTFARARVDTVHQKLQLWLVLTFIKHLTALERVKAQLKFG

Sequences:

>Translated_293_residues
MTLPSPDFISVIVPVFNDTERLAQCLLALEQQTFHQDSYEVIVVDNASEDDVQAVVTHFPHANVVIEPQRGSYAARNTGI
AIAKGNILAFTDADCIPAPDWIEKGVQSLHDTPNCGLVAGRIEFSYQNPQQPNPIELCDSVLYLQQDLYLKHAKFGATAN
VFTFKSVFHKVGLFDQTLKSGGDYEWGQRVFKAGYPQVYSAEAFVHHPARHSFAQLYQKILRTTRGPYDLSQSSTYTLKK
FIKDIVRDVFPPFKTFARARVDTVHQKLQLWLVLTFIKHLTALERVKAQLKFG
>Mature_292_residues
TLPSPDFISVIVPVFNDTERLAQCLLALEQQTFHQDSYEVIVVDNASEDDVQAVVTHFPHANVVIEPQRGSYAARNTGIA
IAKGNILAFTDADCIPAPDWIEKGVQSLHDTPNCGLVAGRIEFSYQNPQQPNPIELCDSVLYLQQDLYLKHAKFGATANV
FTFKSVFHKVGLFDQTLKSGGDYEWGQRVFKAGYPQVYSAEAFVHHPARHSFAQLYQKILRTTRGPYDLSQSSTYTLKKF
IKDIVRDVFPPFKTFARARVDTVHQKLQLWLVLTFIKHLTALERVKAQLKFG

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 33103; Mature: 32972

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLPSPDFISVIVPVFNDTERLAQCLLALEQQTFHQDSYEVIVVDNASEDDVQAVVTHFP
CCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCC
HANVVIEPQRGSYAARNTGIAIAKGNILAFTDADCIPAPDWIEKGVQSLHDTPNCGLVAG
CCCEEEECCCCCCCCCCCCEEEEECCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEEE
RIEFSYQNPQQPNPIELCDSVLYLQQDLYLKHAKFGATANVFTFKSVFHKVGLFDQTLKS
EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHC
GGDYEWGQRVFKAGYPQVYSAEAFVHHPARHSFAQLYQKILRTTRGPYDLSQSSTYTLKK
CCCCHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
FIKDIVRDVFPPFKTFARARVDTVHQKLQLWLVLTFIKHLTALERVKAQLKFG
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TLPSPDFISVIVPVFNDTERLAQCLLALEQQTFHQDSYEVIVVDNASEDDVQAVVTHFP
CCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCC
HANVVIEPQRGSYAARNTGIAIAKGNILAFTDADCIPAPDWIEKGVQSLHDTPNCGLVAG
CCCEEEECCCCCCCCCCCCEEEEECCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEEE
RIEFSYQNPQQPNPIELCDSVLYLQQDLYLKHAKFGATANVFTFKSVFHKVGLFDQTLKS
EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHC
GGDYEWGQRVFKAGYPQVYSAEAFVHHPARHSFAQLYQKILRTTRGPYDLSQSSTYTLKK
CCCCHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
FIKDIVRDVFPPFKTFARARVDTVHQKLQLWLVLTFIKHLTALERVKAQLKFG
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]