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The map label for this gene is yibD [C]

Identifier: 158338803

GI number: 158338803

Start: 5792245

End: 5793153

Strand: Reverse

Name: yibD [C]

Synonym: AM1_5714

Alternate gene names: 158338803

Gene position: 5793153-5792245 (Counterclockwise)

Preceding gene: 158338804

Following gene: 158338802

Centisome position: 89.07

GC content: 44.22

Gene sequence:

>909_bases
ATGGATTTTGTTTCTGTTATTATCCCGGTTTTTAATGATACTCAGCGTTTGAGAGAATGCTTAACCGCTTTAAGCTGCCA
GACTTATCCTCAAGATTTATTTGAAGTGATTGTTGTGGATAATAATTCAGATGAGTCCATTGATGCTGTTGTAGCTGAGT
TTGAGCATTTTATCTATGCTTATGAAGCTAAGCAAAGCTCCTATGCAGCCAGGAATAAAGGAATAGCGATTGCCAAGGGC
GAGATACTGGCTTTCACCGATTCCGATTGCACCCCTTGTGAACAATGGTTGGAGAGCGGGGTCAATTCGCTACATTTAGG
CCAAGCCGATCTGGCAGGGGGTAGAGTGACGTTTTCCTTTTCACCTCAAAGAACAGCAGCAGAGTTATTTGACTCCATTA
CGTCCTTACAAGTTAAGAAGAATATTGAAAACCGACAGTTGACGGTTACAGCAAACCTATTTACCGATCGAAGGGTCTTT
GATGCCATAGGCTATTTTGATTCCAGTATAAAATCTGGGGGAGATTTTAAATGGACCAAGAAAGCCACCGACTCAGGGTT
CAAACTTATCTACTCTCCTGAGGCAGAAATTCATCATCCTACCCGCAACTTCCGTTCTCTCGTGAAGAAAGGCTACCGGG
TGGGGGCAGGCCAGTTGGACCTGCAGCTGGATCAAAATGTTGCCTTATGGGCGGTCATCCGCCATACTCTTCGGCAAATT
CTTCCACCCAATCCCTGGCGTTATAGACAGTTTATTCTCGATTCTGAGAGTGACGAAGCTCGACAACACGTAACTTCCAT
CATATTTATCGCTTGGATTTGTAATATTGCCAAAAGCTTGGGTCGTCTGAATGCCCTACTTAAAAGATTGGGCACCCAGA
CTAAAGTCTCCTTGCAAGGACAACACTAG

Upstream 100 bases:

>100_bases
TCGAGAAAGACTACAACATCCATCACCTGAATGATCAGTTAGTTGATATTTATCAATCCCTTCTATGACGTTAATGAGCA
ATCGATAGAATTTTTTAATT

Downstream 100 bases:

>100_bases
CTATCGGGTCGTATTTCTAAAAAAGCACACACATAGCCATGACTCTCCCTTCCCCAGATTTTATTTCGGTTATCGTTCCA
GTCTTCAATGATACGGAGCG

Product: glycosyl transferase, group 2 family protein

Products: NA

Alternate protein names: Glycosyltransferase; Glycosyl Transferase Group 2 Family Protein; Family 2 Glycosyl Transferase; Glycosyl Transferase; Dolichyl-Phosphate Mannose Synthase Related Protein; Glycosyltransferase AglE; Rhamnosyl Transferase; Glycosyl Transferase Group 2 Family; Membrane Sugar Transferase; Glycoside Hydrolase Family 2 Protein; Glycosyl Transferase Family 2 Protein; Family Glycosyltransferase; Sugar Transferase-Like Protein; B-Glycosyltransferase; Glycosyltransferase AglI; Glycosyl Transferase Group 1/2 Family Protein; Dolichyl-Phosphate Mannose Synthase-Like Protein

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MDFVSVIIPVFNDTQRLRECLTALSCQTYPQDLFEVIVVDNNSDESIDAVVAEFEHFIYAYEAKQSSYAARNKGIAIAKG
EILAFTDSDCTPCEQWLESGVNSLHLGQADLAGGRVTFSFSPQRTAAELFDSITSLQVKKNIENRQLTVTANLFTDRRVF
DAIGYFDSSIKSGGDFKWTKKATDSGFKLIYSPEAEIHHPTRNFRSLVKKGYRVGAGQLDLQLDQNVALWAVIRHTLRQI
LPPNPWRYRQFILDSESDEARQHVTSIIFIAWICNIAKSLGRLNALLKRLGTQTKVSLQGQH

Sequences:

>Translated_302_residues
MDFVSVIIPVFNDTQRLRECLTALSCQTYPQDLFEVIVVDNNSDESIDAVVAEFEHFIYAYEAKQSSYAARNKGIAIAKG
EILAFTDSDCTPCEQWLESGVNSLHLGQADLAGGRVTFSFSPQRTAAELFDSITSLQVKKNIENRQLTVTANLFTDRRVF
DAIGYFDSSIKSGGDFKWTKKATDSGFKLIYSPEAEIHHPTRNFRSLVKKGYRVGAGQLDLQLDQNVALWAVIRHTLRQI
LPPNPWRYRQFILDSESDEARQHVTSIIFIAWICNIAKSLGRLNALLKRLGTQTKVSLQGQH
>Mature_302_residues
MDFVSVIIPVFNDTQRLRECLTALSCQTYPQDLFEVIVVDNNSDESIDAVVAEFEHFIYAYEAKQSSYAARNKGIAIAKG
EILAFTDSDCTPCEQWLESGVNSLHLGQADLAGGRVTFSFSPQRTAAELFDSITSLQVKKNIENRQLTVTANLFTDRRVF
DAIGYFDSSIKSGGDFKWTKKATDSGFKLIYSPEAEIHHPTRNFRSLVKKGYRVGAGQLDLQLDQNVALWAVIRHTLRQI
LPPNPWRYRQFILDSESDEARQHVTSIIFIAWICNIAKSLGRLNALLKRLGTQTKVSLQGQH

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.-.-.- [C]

Molecular weight: Translated: 34026; Mature: 34026

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFVSVIIPVFNDTQRLRECLTALSCQTYPQDLFEVIVVDNNSDESIDAVVAEFEHFIYA
CCHHHEEHHHCCCHHHHHHHHHHHHCCCCCHHHEEEEEEECCCCHHHHHHHHHHHHHHHH
YEAKQSSYAARNKGIAIAKGEILAFTDSDCTPCEQWLESGVNSLHLGQADLAGGRVTFSF
HHCCHHHHHHHCCCEEEECCCEEEEECCCCCHHHHHHHCCCCEEECCCCCCCCCEEEEEE
SPQRTAAELFDSITSLQVKKNIENRQLTVTANLFTDRRVFDAIGYFDSSIKSGGDFKWTK
CCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEC
KATDSGFKLIYSPEAEIHHPTRNFRSLVKKGYRVGAGQLDLQLDQNVALWAVIRHTLRQI
CCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHH
LPPNPWRYRQFILDSESDEARQHVTSIIFIAWICNIAKSLGRLNALLKRLGTQTKVSLQG
CCCCCHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECC
QH
CC
>Mature Secondary Structure
MDFVSVIIPVFNDTQRLRECLTALSCQTYPQDLFEVIVVDNNSDESIDAVVAEFEHFIYA
CCHHHEEHHHCCCHHHHHHHHHHHHCCCCCHHHEEEEEEECCCCHHHHHHHHHHHHHHHH
YEAKQSSYAARNKGIAIAKGEILAFTDSDCTPCEQWLESGVNSLHLGQADLAGGRVTFSF
HHCCHHHHHHHCCCEEEECCCEEEEECCCCCHHHHHHHCCCCEEECCCCCCCCCEEEEEE
SPQRTAAELFDSITSLQVKKNIENRQLTVTANLFTDRRVFDAIGYFDSSIKSGGDFKWTK
CCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEC
KATDSGFKLIYSPEAEIHHPTRNFRSLVKKGYRVGAGQLDLQLDQNVALWAVIRHTLRQI
CCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHH
LPPNPWRYRQFILDSESDEARQHVTSIIFIAWICNIAKSLGRLNALLKRLGTQTKVSLQG
CCCCCHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECC
QH
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA