| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158338626
Identifier: 158338626
GI number: 158338626
Start: 5580181
End: 5580561
Strand: Direct
Name: 158338626
Synonym: AM1_5530
Alternate gene names: NA
Gene position: 5580181-5580561 (Clockwise)
Preceding gene: 158338623
Following gene: 158338629
Centisome position: 85.8
GC content: 46.46
Gene sequence:
>381_bases ATGTCTAAGTTCAATAAGATTTCTGCAAAAGCACTGGTAATGGCATCTGTGGCCGTAGGTGTTCAAGCGGTCAGTACCTT TGGTGCATTTGCTGGCCCTGCCCTCTTTTATCGCTACGGCACGGTTCGACTCAATCAGCGGGATTGTATGCGCAGGGCTT CTGTTTCCCTAAGACGAGAAGGTCTCAATGTCCGGAGGCCAGAAGTGAATATCAACAATACCCCGTTTATCTTTGCTGAC AATGAAGATTATTCTGCCATTATCGATTGTTCTCAGTTTGCCAAACGATATCGTGCCAATAAGCGTGTCACTGTGATGGT CAGCGGTTATGGAAGAGGCGCAAATACCCTTTCCAGCGCATTGATTGACAACATGTACTAA
Upstream 100 bases:
>100_bases AAATTATAAATAACCAAGGACTCAAATCAAAGCAGGTAAAACAGCCCCTACATAGAGGATTCACGCTTTCTGCTTGAGTC ACAGAAAGGAGTAATACATC
Downstream 100 bases:
>100_bases CCCGAGCATTCTCAACATAAAAATTAAGGCCGGACTGGTTCTTAATAGAGCTAGTCCGGCCTTATATGGTCGAAAGGGGA AAATTCCTACTTCAGTAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MSKFNKISAKALVMASVAVGVQAVSTFGAFAGPALFYRYGTVRLNQRDCMRRASVSLRREGLNVRRPEVNINNTPFIFAD NEDYSAIIDCSQFAKRYRANKRVTVMVSGYGRGANTLSSALIDNMY
Sequences:
>Translated_126_residues MSKFNKISAKALVMASVAVGVQAVSTFGAFAGPALFYRYGTVRLNQRDCMRRASVSLRREGLNVRRPEVNINNTPFIFAD NEDYSAIIDCSQFAKRYRANKRVTVMVSGYGRGANTLSSALIDNMY >Mature_125_residues SKFNKISAKALVMASVAVGVQAVSTFGAFAGPALFYRYGTVRLNQRDCMRRASVSLRREGLNVRRPEVNINNTPFIFADN EDYSAIIDCSQFAKRYRANKRVTVMVSGYGRGANTLSSALIDNMY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13987; Mature: 13856
Theoretical pI: Translated: 10.66; Mature: 10.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKFNKISAKALVMASVAVGVQAVSTFGAFAGPALFYRYGTVRLNQRDCMRRASVSLRRE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEECEEEECHHHHHHHHHHHHHHC GLNVRRPEVNINNTPFIFADNEDYSAIIDCSQFAKRYRANKRVTVMVSGYGRGANTLSSA CCCCCCCCCCCCCCCEEEECCCCCEEEECHHHHHHHHCCCCEEEEEEECCCCCHHHHHHH LIDNMY HHHCCC >Mature Secondary Structure SKFNKISAKALVMASVAVGVQAVSTFGAFAGPALFYRYGTVRLNQRDCMRRASVSLRRE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEECEEEECHHHHHHHHHHHHHHC GLNVRRPEVNINNTPFIFADNEDYSAIIDCSQFAKRYRANKRVTVMVSGYGRGANTLSSA CCCCCCCCCCCCCCCEEEECCCCCEEEECHHHHHHHHCCCCEEEEEEECCCCCHHHHHHH LIDNMY HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA