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The map label for this gene is hdrB2 [H]

Identifier: 158338622

GI number: 158338622

Start: 5572829

End: 5573737

Strand: Direct

Name: hdrB2 [H]

Synonym: AM1_5526

Alternate gene names: 158338622

Gene position: 5572829-5573737 (Clockwise)

Preceding gene: 158338615

Following gene: 158338623

Centisome position: 85.69

GC content: 47.63

Gene sequence:

>909_bases
ATGTCGGTCCCAACACTTCAATATGCTTACTTCCCAGGATGTGTCGCTCAAGGCGCTTGCCGAGAATTGTACATGTCAAC
CCAGGAAATAACCCAGGCCTTAGGGATTAAACTCATTGAACTGAAGAAAGCGGCCTGTTGTGGGTCCGGCACATTCAAAG
AAGATTCTCAGCTACTAGAAGATACCGTTAATGCCCGCAATATAGCCCTAGCTGAACAGCTCAATTTACCTCTACTCACC
CATTGCAGTACCTGCCAAGGAGTAATTGGCCATGTTGATGAGCGACTCAAAGACGCCAAGGATAATGACCCTGACTATTT
TGATCAGATCAATAACCTCTTATCTGAGCAGCATTGTTCTCCCTATCAAGGTAGTACTGAAGTCAAGCATCTTCTCTGGG
CCTTGGTTGGAGACTTTGGTTTGGAAGCTCTGTCCCTTCAGGTCAAGCGTAAACTTAGCGGCTTAAAATGTGCGGCTTTT
TATGGTTGCTATCTGCTCAGAGCTCAACAGAGCCTCCCCTTCGACGATCCCATTCACCCTTCTTCCATGGAAAACGTGTT
TTTGGCCCTCGATGCCACCCCGATCTATTACTCAGGGCGCACCCAATGTTGTGGTTGGCCCCTCGCGAGCTATGCTACCC
CTCAGTCCTTTGCCATGGCTGGTGGCAGAATTCAGGACGCCATTGCAGCCGGAGCAGATTGCTTAGTGACTCCTTGTCCC
CTTTGCCATTTGAATTTGGATTCTCGTCAACCTGAAGTTGAAAAGTCCATTGATACCAAGCTAGGGCTGCCTGTTTTGCA
TTTACCTCAATTAGTCGGGTTAGCTTTAGGAATTGAGCCCCAGAAATTAGGGCTAGAAAAGCATGTGGTCTCTACCAAAC
CCATACTAGAGAAATTAGGCCTAACTTAA

Upstream 100 bases:

>100_bases
ATTTCACCGTTTTGTAATGTTCAATCACAGGTAACCCGAATTCTCAGGCCAACATGCTAGCGTTGCTCTAGCAAAGGCTC
AGTTACAGCGAGTAATTCAG

Downstream 100 bases:

>100_bases
CAGGCTCAAAATCTGTCTGCAGTTAGGTCTTAATCTCTGTTCTGACTTGCTCCCGTTCCCAATTGTGAGACACATTACAG
CCTGAAGAAACCCGAAGGAT

Product: heterodisulfide reductase B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 301

Protein sequence:

>302_residues
MSVPTLQYAYFPGCVAQGACRELYMSTQEITQALGIKLIELKKAACCGSGTFKEDSQLLEDTVNARNIALAEQLNLPLLT
HCSTCQGVIGHVDERLKDAKDNDPDYFDQINNLLSEQHCSPYQGSTEVKHLLWALVGDFGLEALSLQVKRKLSGLKCAAF
YGCYLLRAQQSLPFDDPIHPSSMENVFLALDATPIYYSGRTQCCGWPLASYATPQSFAMAGGRIQDAIAAGADCLVTPCP
LCHLNLDSRQPEVEKSIDTKLGLPVLHLPQLVGLALGIEPQKLGLEKHVVSTKPILEKLGLT

Sequences:

>Translated_302_residues
MSVPTLQYAYFPGCVAQGACRELYMSTQEITQALGIKLIELKKAACCGSGTFKEDSQLLEDTVNARNIALAEQLNLPLLT
HCSTCQGVIGHVDERLKDAKDNDPDYFDQINNLLSEQHCSPYQGSTEVKHLLWALVGDFGLEALSLQVKRKLSGLKCAAF
YGCYLLRAQQSLPFDDPIHPSSMENVFLALDATPIYYSGRTQCCGWPLASYATPQSFAMAGGRIQDAIAAGADCLVTPCP
LCHLNLDSRQPEVEKSIDTKLGLPVLHLPQLVGLALGIEPQKLGLEKHVVSTKPILEKLGLT
>Mature_301_residues
SVPTLQYAYFPGCVAQGACRELYMSTQEITQALGIKLIELKKAACCGSGTFKEDSQLLEDTVNARNIALAEQLNLPLLTH
CSTCQGVIGHVDERLKDAKDNDPDYFDQINNLLSEQHCSPYQGSTEVKHLLWALVGDFGLEALSLQVKRKLSGLKCAAFY
GCYLLRAQQSLPFDDPIHPSSMENVFLALDATPIYYSGRTQCCGWPLASYATPQSFAMAGGRIQDAIAAGADCLVTPCPL
CHLNLDSRQPEVEKSIDTKLGLPVLHLPQLVGLALGIEPQKLGLEKHVVSTKPILEKLGLT

Specific function: Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B). HdrB may have a function in energy transduction [H]

COG id: COG2048

COG function: function code C; Heterodisulfide reductase, subunit B

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hdrB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017678
- InterPro:   IPR004017 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: =1.8.98.1 [H]

Molecular weight: Translated: 32893; Mature: 32762

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVPTLQYAYFPGCVAQGACRELYMSTQEITQALGIKLIELKKAACCGSGTFKEDSQLLE
CCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHCCCCCCHHHHHHHH
DTVNARNIALAEQLNLPLLTHCSTCQGVIGHVDERLKDAKDNDPDYFDQINNLLSEQHCS
HHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC
PYQGSTEVKHLLWALVGDFGLEALSLQVKRKLSGLKCAAFYGCYLLRAQQSLPFDDPIHP
CCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCC
SSMENVFLALDATPIYYSGRTQCCGWPLASYATPQSFAMAGGRIQDAIAAGADCLVTPCP
CCCCCEEEEEECCEEEECCCCCCCCCCHHHCCCCHHHHHCCCHHHHHHHCCCCCEECCCC
LCHLNLDSRQPEVEKSIDTKLGLPVLHLPQLVGLALGIEPQKLGLEKHVVSTKPILEKLG
EEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHCHHHHHHHHHHHHHHHC
LT
CC
>Mature Secondary Structure 
SVPTLQYAYFPGCVAQGACRELYMSTQEITQALGIKLIELKKAACCGSGTFKEDSQLLE
CCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHCCCCCCHHHHHHHH
DTVNARNIALAEQLNLPLLTHCSTCQGVIGHVDERLKDAKDNDPDYFDQINNLLSEQHCS
HHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC
PYQGSTEVKHLLWALVGDFGLEALSLQVKRKLSGLKCAAFYGCYLLRAQQSLPFDDPIHP
CCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCC
SSMENVFLALDATPIYYSGRTQCCGWPLASYATPQSFAMAGGRIQDAIAAGADCLVTPCP
CCCCCEEEEEECCEEEECCCCCCCCCCHHHCCCCHHHHHCCCHHHHHHHCCCCCEECCCC
LCHLNLDSRQPEVEKSIDTKLGLPVLHLPQLVGLALGIEPQKLGLEKHVVSTKPILEKLG
EEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHCHHHHHHHHHHHHHHHC
LT
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]