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The map label for this gene is psbN

Identifier: 158338607

GI number: 158338607

Start: 5561736

End: 5561876

Strand: Reverse

Name: psbN

Synonym: AM1_5511

Alternate gene names: 158338607

Gene position: 5561876-5561736 (Counterclockwise)

Preceding gene: 158338614

Following gene: 158338606

Centisome position: 85.52

GC content: 43.26

Gene sequence:

>141_bases
ATGCAATTTTCTGACCCTGCAACAGTTCTTATCATAACCATCTTGGCTGTAACCATTGCCTTTACTGCGGTTTCCCTATA
TACAGCTTTCGGTCCTCCCTCCAAACAATTGGCAGATCCCTTTGAAGAGCATGAGGATTAA

Upstream 100 bases:

>100_bases
TCCCCACCAGGTCTGTTTTGGCATAGCTTATCGGCTCACAACAAACAACACTATTTTTTAACTTATCGTAATATTATAGA
GGAAAGATACTCATAAAAAA

Downstream 100 bases:

>100_bases
TTCCCCATTCAGGCATGTTTTTAGTTAAATAAGATGCCTTTTGGGGCACGCTTGCTAGGATGGCTAGTTGTGGCACGTCT
AGAGTGAGTCAATGCCTCAA

Product: photosystem II protein PsbN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 46; Mature: 46

Protein sequence:

>46_residues
MQFSDPATVLIITILAVTIAFTAVSLYTAFGPPSKQLADPFEEHED

Sequences:

>Translated_46_residues
MQFSDPATVLIITILAVTIAFTAVSLYTAFGPPSKQLADPFEEHED
>Mature_46_residues
MQFSDPATVLIITILAVTIAFTAVSLYTAFGPPSKQLADPFEEHED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:
GO:0009523: Protein psbN
GO:0009539: Protein psbN
GO:0009579: Protein psbN
GO:0015979: Protein psbN
GO:0016020: Protein psbN
GO:0016021: Protein psbN
GO:0042651: Protein psbN

Cell location: Cellular thylakoid membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psbN family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSBN_ACAM1 (B0CDZ1)

Other databases:

- EMBL:   CP000828
- RefSeq:   YP_001519784.1
- GeneID:   5684302
- GenomeReviews:   CP000828_GR
- KEGG:   amr:AM1_5511
- HOGENOM:   HBG710424
- BioCyc:   AMAR329726:AM1_5511-MONOMER
- GO:   GO:0015979
- HAMAP:   MF_00293
- InterPro:   IPR003398
- ProDom:   PD005510

Pfam domain/function: PF02468 PsbN

EC number: NA

Molecular weight: Translated: 4997; Mature: 4997

Theoretical pI: Translated: 3.82; Mature: 3.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x13db5a90)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFSDPATVLIITILAVTIAFTAVSLYTAFGPPSKQLADPFEEHED
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCH
>Mature Secondary Structure
MQFSDPATVLIITILAVTIAFTAVSLYTAFGPPSKQLADPFEEHED
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA