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The map label for this gene is frr [H]

Identifier: 158338603

GI number: 158338603

Start: 5556940

End: 5557461

Strand: Direct

Name: frr [H]

Synonym: AM1_5507

Alternate gene names: 158338603

Gene position: 5556940-5557461 (Clockwise)

Preceding gene: 158338602

Following gene: 158338604

Centisome position: 85.44

GC content: 49.81

Gene sequence:

>522_bases
ATGCAAAAGTCCATTGAGGCCATGAAGCGGTCCCTCAACACCATTCGGACGGGGCGGGCCAATGCTTCTTTATTAGACCG
AATTACGGTGGAATACTACGGCACAGAGACTCCCTTACGGTCTTTGGCCACCATCAGTACTCCAGATGCCAGCACCATTA
CCATTCAGCCCTTTGACCCCAGCAGCTTGACGGATATCGAGCGATCTATTTCTCTTTCTGATGTGGGCTTGGTGCCTAAC
AATGATGGCTCCGCCATTCGCCTCAATATTCCGCCGTTGACGGAAGAACGCCGTAAGGACTTCGTCAAAATGGCTGGCAA
GATCGCCGAAGAAGGGAAAGTTGCCATCCGCAACATCCGCCGCGATGCCATTGATACAGCCCGCAAGCAGGGAAAAAGTG
GTGATATCTCAGAAGATGAATCCAAGGATCTTCAAGACAAGATCCAAGGTTTAACCGATAAGTATACGGGCCAAGTCGAC
AAGATTTTGGCTGAAAAGGAAACAGAAATCACCACGGTTTAA

Upstream 100 bases:

>100_bases
GACCTTTCCGTTTCTGGAAATATTCGACGGGCCCTATTGGGCGAATCTATTGGCACTATTGTGGGAGGTTCTTGTGGAGT
TAGCTGAGGCCGAGACTTTA

Downstream 100 bases:

>100_bases
TATGTTTGATTGCATTATTGTCGGGGCGGGGCCAGCAGGGGGTACCGCAGCCTATCACCTTGCCAAGAAAGGTCGATCGG
TCCTCGTTTTAGAAAAGGAA

Product: ribosome recycling factor

Products: NA

Alternate protein names: RRF; Ribosome-releasing factor [H]

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MQKSIEAMKRSLNTIRTGRANASLLDRITVEYYGTETPLRSLATISTPDASTITIQPFDPSSLTDIERSISLSDVGLVPN
NDGSAIRLNIPPLTEERRKDFVKMAGKIAEEGKVAIRNIRRDAIDTARKQGKSGDISEDESKDLQDKIQGLTDKYTGQVD
KILAEKETEITTV

Sequences:

>Translated_173_residues
MQKSIEAMKRSLNTIRTGRANASLLDRITVEYYGTETPLRSLATISTPDASTITIQPFDPSSLTDIERSISLSDVGLVPN
NDGSAIRLNIPPLTEERRKDFVKMAGKIAEEGKVAIRNIRRDAIDTARKQGKSGDISEDESKDLQDKIQGLTDKYTGQVD
KILAEKETEITTV
>Mature_173_residues
MQKSIEAMKRSLNTIRTGRANASLLDRITVEYYGTETPLRSLATISTPDASTITIQPFDPSSLTDIERSISLSDVGLVPN
NDGSAIRLNIPPLTEERRKDFVKMAGKIAEEGKVAIRNIRRDAIDTARKQGKSGDISEDESKDLQDKIQGLTDKYTGQVD
KILAEKETEITTV

Specific function: Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another [H]

COG id: COG0233

COG function: function code J; Ribosome recycling factor

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RRF family [H]

Homologues:

Organism=Escherichia coli, GI1786368, Length=170, Percent_Identity=49.4117647058824, Blast_Score=162, Evalue=1e-41,
Organism=Drosophila melanogaster, GI24661488, Length=171, Percent_Identity=28.0701754385965, Blast_Score=76, Evalue=1e-14,

Paralogues:

None

Copy number: 840 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002661
- InterPro:   IPR015998 [H]

Pfam domain/function: PF01765 RRF [H]

EC number: NA

Molecular weight: Translated: 19081; Mature: 19081

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKSIEAMKRSLNTIRTGRANASLLDRITVEYYGTETPLRSLATISTPDASTITIQPFDP
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEECCCCHHHHHHCCCCCCCCEEEEECCCC
SSLTDIERSISLSDVGLVPNNDGSAIRLNIPPLTEERRKDFVKMAGKIAEEGKVAIRNIR
CHHHHHHHHCCHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH
RDAIDTARKQGKSGDISEDESKDLQDKIQGLTDKYTGQVDKILAEKETEITTV
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MQKSIEAMKRSLNTIRTGRANASLLDRITVEYYGTETPLRSLATISTPDASTITIQPFDP
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEECCCCHHHHHHCCCCCCCCEEEEECCCC
SSLTDIERSISLSDVGLVPNNDGSAIRLNIPPLTEERRKDFVKMAGKIAEEGKVAIRNIR
CHHHHHHHHCCHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH
RDAIDTARKQGKSGDISEDESKDLQDKIQGLTDKYTGQVDKILAEKETEITTV
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA