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The map label for this gene is yoqW [H]

Identifier: 158338582

GI number: 158338582

Start: 5541872

End: 5542522

Strand: Direct

Name: yoqW [H]

Synonym: AM1_5485

Alternate gene names: 158338582

Gene position: 5541872-5542522 (Clockwise)

Preceding gene: 158338581

Following gene: 158338583

Centisome position: 85.21

GC content: 51.77

Gene sequence:

>651_bases
ATGTGTGGTCGCTTTGCCCTGACGGCAACCCCAGATGAGATCGCCACTGCCTTTGGCCTCCAGAATGTCCCACCGTTTCC
ACCCCGCTATAATATTGCCCCCAGTCAGCCCGTGGCCGTGATTCGGCAGCTACAGCATCAGCCCCGGGAATTTCGATTGA
TGCAATGGGGACTGATTCCCAGTTGGGCCAAAGATCCCAGTATTGGCAATAAGCTGATTAATGCTCGCTGTGAAACCGCC
CATGAAAAGCCTTCCTTTCGCTCAGCGATTAAGTATCGTCGCTGCCTGATTCCGGCGAGCGGTTTTTATGAATGGCAAAA
GGTCGATAAAAGCACGAAGCAGCCCTATTATTTCCACAAGCCTCAACCTTTTGCCCTGGCGGGGCTGTGGGAGTCTTGGA
ATGATATTGAAACCTGCATTATCCTTACCACCCAGCCCAATGATGTGGTGGCCCCCGTTCATCAGCGGATGCCCGTGATC
ATCTCTCCTGAAAACTATAAGGTGTGGCTCAACTTTGATACGCAAACCCCGAGTCACCTGTTTCATCTGTTTGACCCGGA
TTTAGTCCAAGATTTATCGGCTTTGCCGGTGACCACTTTAGTCAACAGTCCGACAGTGGATCGGCCTGAATGTATTGAGC
CGATGCTGTAG

Upstream 100 bases:

>100_bases
AACGGCAAGTCTATACAGATGGTGAGTATTATGAGAGTCATCTGATGGCATTGGCTGCCGGTCGTTACTTGGTTGAACAG
TCCCTGGAGGTGGAGTAATT

Downstream 100 bases:

>100_bases
CCTCTAGCCAAAAACGATGCGTAAGATCCTGCATATCGATATGGATGCGTTCTTCGCCTCCGTGGAGCAGCGAGATAATC
CCCGCCTACGAGGCAAGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MCGRFALTATPDEIATAFGLQNVPPFPPRYNIAPSQPVAVIRQLQHQPREFRLMQWGLIPSWAKDPSIGNKLINARCETA
HEKPSFRSAIKYRRCLIPASGFYEWQKVDKSTKQPYYFHKPQPFALAGLWESWNDIETCIILTTQPNDVVAPVHQRMPVI
ISPENYKVWLNFDTQTPSHLFHLFDPDLVQDLSALPVTTLVNSPTVDRPECIEPML

Sequences:

>Translated_216_residues
MCGRFALTATPDEIATAFGLQNVPPFPPRYNIAPSQPVAVIRQLQHQPREFRLMQWGLIPSWAKDPSIGNKLINARCETA
HEKPSFRSAIKYRRCLIPASGFYEWQKVDKSTKQPYYFHKPQPFALAGLWESWNDIETCIILTTQPNDVVAPVHQRMPVI
ISPENYKVWLNFDTQTPSHLFHLFDPDLVQDLSALPVTTLVNSPTVDRPECIEPML
>Mature_216_residues
MCGRFALTATPDEIATAFGLQNVPPFPPRYNIAPSQPVAVIRQLQHQPREFRLMQWGLIPSWAKDPSIGNKLINARCETA
HEKPSFRSAIKYRRCLIPASGFYEWQKVDKSTKQPYYFHKPQPFALAGLWESWNDIETCIILTTQPNDVVAPVHQRMPVI
ISPENYKVWLNFDTQTPSHLFHLFDPDLVQDLSALPVTTLVNSPTVDRPECIEPML

Specific function: Unknown

COG id: COG2135

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0361 family [H]

Homologues:

Organism=Homo sapiens, GI54607106, Length=272, Percent_Identity=26.8382352941176, Blast_Score=86, Evalue=2e-17,
Organism=Homo sapiens, GI54607104, Length=272, Percent_Identity=26.8382352941176, Blast_Score=86, Evalue=2e-17,
Organism=Escherichia coli, GI48994894, Length=183, Percent_Identity=28.9617486338798, Blast_Score=80, Evalue=8e-17,
Organism=Saccharomyces cerevisiae, GI6323761, Length=256, Percent_Identity=27.734375, Blast_Score=86, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003738 [H]

Pfam domain/function: PF02586 DUF159 [H]

EC number: NA

Molecular weight: Translated: 24709; Mature: 24709

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCGRFALTATPDEIATAFGLQNVPPFPPRYNIAPSQPVAVIRQLQHQPREFRLMQWGLIP
CCCCEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHEEECCCCCC
SWAKDPSIGNKLINARCETAHEKPSFRSAIKYRRCLIPASGFYEWQKVDKSTKQPYYFHK
CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEEC
PQPFALAGLWESWNDIETCIILTTQPNDVVAPVHQRMPVIISPENYKVWLNFDTQTPSHL
CCCEEEEECCCCCCCCCEEEEEEECCCCCCCHHHHCCCEEECCCCEEEEEEECCCCHHHE
FHLFDPDLVQDLSALPVTTLVNSPTVDRPECIEPML
EECCCHHHHHHHHHCCHHHHCCCCCCCCCHHCCCCC
>Mature Secondary Structure
MCGRFALTATPDEIATAFGLQNVPPFPPRYNIAPSQPVAVIRQLQHQPREFRLMQWGLIP
CCCCEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHEEECCCCCC
SWAKDPSIGNKLINARCETAHEKPSFRSAIKYRRCLIPASGFYEWQKVDKSTKQPYYFHK
CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEEC
PQPFALAGLWESWNDIETCIILTTQPNDVVAPVHQRMPVIISPENYKVWLNFDTQTPSHL
CCCEEEEECCCCCCCCCEEEEEEECCCCCCCHHHHCCCEEECCCCEEEEEEECCCCHHHE
FHLFDPDLVQDLSALPVTTLVNSPTVDRPECIEPML
EECCCHHHHHHHHHCCHHHHCCCCCCCCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]