| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158338529
Identifier: 158338529
GI number: 158338529
Start: 5487815
End: 5488738
Strand: Reverse
Name: 158338529
Synonym: AM1_5431
Alternate gene names: NA
Gene position: 5488738-5487815 (Counterclockwise)
Preceding gene: 158338531
Following gene: 158338528
Centisome position: 84.39
GC content: 30.63
Gene sequence:
>924_bases ATGATATCTACAAATTTTATTGACAATATCGGATCTAAATTATCTGACCCCCAATTTTCTTCATTTCTAGCACCATCTTT TATTTTTTGGTTTGGTGGACTATTAGCTTATATTAATAAATATGGGATAACATCCCTTGAATTATTTCTAAATCAATATT CAGAAATTAGTAAAATAATTTTTTTAATTTTTGCTTTCATTTTAATTACACTTTCTGCATTCTTAGTCAAAAGTTTCGAT TTATCTCTTTTAAGATTACTAGAGGGATACTGGCCTATTTACATGCAATCTCTTAAAAAGATTTTAATTGCTCGAAAAAG AAAATTGATTAGTCATGCAGAACATCACTGGCAGCAATTAGCTGTTAAGAAAGAACTTAGTAATTTGACAAGAGATGAGC ATGAACTTTATATTCGCTTAGACCAAAATTTAAGACAATACCCAACAGATCCTATGATGTTGATGCCTACAAAGTTAGGT AACATACTAAGATCACATGAGAGTCAGACATTAAGTAGGTTTGGTTTAGATGCAAATGTTTGTTGGCCACGCCTTTGGTT ATTATTACCTGAAAAAGTGAAATTTGAACTACAATCTGCAAGATCTGATTTATATATTTCAACTCGGTTATTTTTTTGGA GCTGCATTTTTAGTTTTTGGGGGATTTGGCTTTGGTGGGCATTTCCATTAAGTATAATTTCAGTATTTATTTGTTACCAA AGCATTCTAAAAAATGCATCGATATTTGGATGTCTTTGCGAATCAACTTTTGATTTATACCGAAGAAGTCTATATGATTC TCTTGGATGGTCTTTACCAACTAATCTTAGTAATGAACACGAATCTGGTTTAAAGCTATCTGAATTTTTTTGGAGAGGAA CATTACCAATTTTATCAAATATGATGCCAGAAGGTTTGGATTAA
Upstream 100 bases:
>100_bases CCATATGGCGATTTTATCTGGTACCAAAGAAATAGCTCACAGAAAGTACCTAGATGCCCTACGCATGGAGAATTAATACC AGTTAATTAGTACTATTTAA
Downstream 100 bases:
>100_bases TCTAAATATGATTTAATAGACCTCTTGCAATATTCATTTCACGGTGTATTACGCAATCAATTTATGCCGCGATCTGACTT GAACTTTTAGTCCACTACCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 307; Mature: 307
Protein sequence:
>307_residues MISTNFIDNIGSKLSDPQFSSFLAPSFIFWFGGLLAYINKYGITSLELFLNQYSEISKIIFLIFAFILITLSAFLVKSFD LSLLRLLEGYWPIYMQSLKKILIARKRKLISHAEHHWQQLAVKKELSNLTRDEHELYIRLDQNLRQYPTDPMMLMPTKLG NILRSHESQTLSRFGLDANVCWPRLWLLLPEKVKFELQSARSDLYISTRLFFWSCIFSFWGIWLWWAFPLSIISVFICYQ SILKNASIFGCLCESTFDLYRRSLYDSLGWSLPTNLSNEHESGLKLSEFFWRGTLPILSNMMPEGLD
Sequences:
>Translated_307_residues MISTNFIDNIGSKLSDPQFSSFLAPSFIFWFGGLLAYINKYGITSLELFLNQYSEISKIIFLIFAFILITLSAFLVKSFD LSLLRLLEGYWPIYMQSLKKILIARKRKLISHAEHHWQQLAVKKELSNLTRDEHELYIRLDQNLRQYPTDPMMLMPTKLG NILRSHESQTLSRFGLDANVCWPRLWLLLPEKVKFELQSARSDLYISTRLFFWSCIFSFWGIWLWWAFPLSIISVFICYQ SILKNASIFGCLCESTFDLYRRSLYDSLGWSLPTNLSNEHESGLKLSEFFWRGTLPILSNMMPEGLD >Mature_307_residues MISTNFIDNIGSKLSDPQFSSFLAPSFIFWFGGLLAYINKYGITSLELFLNQYSEISKIIFLIFAFILITLSAFLVKSFD LSLLRLLEGYWPIYMQSLKKILIARKRKLISHAEHHWQQLAVKKELSNLTRDEHELYIRLDQNLRQYPTDPMMLMPTKLG NILRSHESQTLSRFGLDANVCWPRLWLLLPEKVKFELQSARSDLYISTRLFFWSCIFSFWGIWLWWAFPLSIISVFICYQ SILKNASIFGCLCESTFDLYRRSLYDSLGWSLPTNLSNEHESGLKLSEFFWRGTLPILSNMMPEGLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35970; Mature: 35970
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISTNFIDNIGSKLSDPQFSSFLAPSFIFWFGGLLAYINKYGITSLELFLNQYSEISKII CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH FLIFAFILITLSAFLVKSFDLSLLRLLEGYWPIYMQSLKKILIARKRKLISHAEHHWQQL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVKKELSNLTRDEHELYIRLDQNLRQYPTDPMMLMPTKLGNILRSHESQTLSRFGLDANV HHHHHHHHHCCCHHHEEEEECHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHCCCCHH CWPRLWLLLPEKVKFELQSARSDLYISTRLFFWSCIFSFWGIWLWWAFPLSIISVFICYQ HHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SILKNASIFGCLCESTFDLYRRSLYDSLGWSLPTNLSNEHESGLKLSEFFWRGTLPILSN HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHHHHHHHCCHHHHHH MMPEGLD CCCCCCC >Mature Secondary Structure MISTNFIDNIGSKLSDPQFSSFLAPSFIFWFGGLLAYINKYGITSLELFLNQYSEISKII CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH FLIFAFILITLSAFLVKSFDLSLLRLLEGYWPIYMQSLKKILIARKRKLISHAEHHWQQL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVKKELSNLTRDEHELYIRLDQNLRQYPTDPMMLMPTKLGNILRSHESQTLSRFGLDANV HHHHHHHHHCCCHHHEEEEECHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHCCCCHH CWPRLWLLLPEKVKFELQSARSDLYISTRLFFWSCIFSFWGIWLWWAFPLSIISVFICYQ HHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SILKNASIFGCLCESTFDLYRRSLYDSLGWSLPTNLSNEHESGLKLSEFFWRGTLPILSN HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHHHHHHHCCHHHHHH MMPEGLD CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA