| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158338531
Identifier: 158338531
GI number: 158338531
Start: 5489368
End: 5490696
Strand: Reverse
Name: 158338531
Synonym: AM1_5433
Alternate gene names: NA
Gene position: 5490696-5489368 (Counterclockwise)
Preceding gene: 158338532
Following gene: 158338529
Centisome position: 84.42
GC content: 34.01
Gene sequence:
>1329_bases ATGATTATTCAATACACAAAAAATTTTGCTTCACTAACATTTAGTATTCTTCTAACACTTTTTTTCTTTGTAGCTGAAGA TGTTGCAGAGGCTAGTACTATTGCAGATGCTGCTGAAATATCTCGTTTTAAACCTGAACCATCATCAACAGATTTAATGT TTTTAGGTGATTACAAATTTAGGCGCCGTAATCCTCTTCAAATCGGCGCTAGACTATTAAACTTGAGACAGTATTTATGG ATGATAGGTAATTCAAGGGCAGAAGCATTCATAAGCTACGTATTTGATGGTCAGAAGGATCAAACATTAGGCATGAAAGC TGGACCTTCTCTTAAGTCCACACAGTATTTTTTCCCGTGCCATGCAGAAAATGGAAGATATGTTATTGGGTGGCTTCCAG CAGATGTAAAACAAAGACAATGTTCTAATCCAGGATTTACACATAGCTTTGGTACAAATGTTAGAAATTTGACTAAGGAA GTTTTTTCTCAAGAAATTTTTGTTGCAAACAAAACAATAAGCTATTTTTTAAAAGCTCAGTCTTCCTTAAATCAAAACCC TATTTATAGATACTGCTCTGTTGCTGCAAAAGGTCGTGGTTGGTGGTTCCGTTTTGGAGATTTTGAGAATCCCTGTAATG AAGCCTTTCAAGAATGCTTTAAAACTGGTCCAAAACAAAATTGTAAAGCAGTTGGTATTGGGGATTGGTTTGCAAGGGAA GAAGAATTACTTGTTGTTATTGCTTGCGCTAACAACCGATTATATAAAGCAAAAGGAAATGGTTTGCAAATAGGCCTTAG ACTCATATCAGATTTAGCTCAACAAGCTAAATCTGATAATTCAACTGTTTGTTCATTAAATGTCATAAAGCCTAATAGTA TAATTGTTTATCCTGCCACTGAAAAGGCTACTATCTTTCATTCTAATGATAATGGGGGTTCACTGTCAGTTGATGTTTTA TTGGGAAGTGTACTGATTCGCTCTTATAAAAATAGCGAAGGAATTTTAGTTGAATCAGGGAATAAATATACATATCCGCA AGAAACAATTGACAAAATAAATACTCTTCAAATTTCTCAGTCGCCAGAAATTTCAAGCTTTTTTGATTCGGAAAACTGGC CTAGTGAAACAAGAAATGACTTAAGATATTTTCAAACACCTGAGATTAAACCTCCTTCTAGAATAAATATTCCTAGAACC TTTATTGAGCTATTTATTAATAATATAATACGAGGTGTTATTGATGGCAGTCAAACAAGTGAAGGTAATAACACTACAAC TGAAGATAGTAATCAGCAGCAACCTAATACAGACGATATATTACAGTAA
Upstream 100 bases:
>100_bases TCAATAAAATAACTTATTTTATTGACTGATATTATGAGCTTCTTATTTTAGATAGGGCATTATTAACTTCTATCTCATTA AACTTCTTCCTAAAAAAATC
Downstream 100 bases:
>100_bases TATCATAGTAAAACACTATTGATTATATAAATAACTAACTTACTTTGATTAATTTCAAATTTTAATTTCAAAATATTTCT TGATTTTTGAATTTTAATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 442; Mature: 442
Protein sequence:
>442_residues MIIQYTKNFASLTFSILLTLFFFVAEDVAEASTIADAAEISRFKPEPSSTDLMFLGDYKFRRRNPLQIGARLLNLRQYLW MIGNSRAEAFISYVFDGQKDQTLGMKAGPSLKSTQYFFPCHAENGRYVIGWLPADVKQRQCSNPGFTHSFGTNVRNLTKE VFSQEIFVANKTISYFLKAQSSLNQNPIYRYCSVAAKGRGWWFRFGDFENPCNEAFQECFKTGPKQNCKAVGIGDWFARE EELLVVIACANNRLYKAKGNGLQIGLRLISDLAQQAKSDNSTVCSLNVIKPNSIIVYPATEKATIFHSNDNGGSLSVDVL LGSVLIRSYKNSEGILVESGNKYTYPQETIDKINTLQISQSPEISSFFDSENWPSETRNDLRYFQTPEIKPPSRINIPRT FIELFINNIIRGVIDGSQTSEGNNTTTEDSNQQQPNTDDILQ
Sequences:
>Translated_442_residues MIIQYTKNFASLTFSILLTLFFFVAEDVAEASTIADAAEISRFKPEPSSTDLMFLGDYKFRRRNPLQIGARLLNLRQYLW MIGNSRAEAFISYVFDGQKDQTLGMKAGPSLKSTQYFFPCHAENGRYVIGWLPADVKQRQCSNPGFTHSFGTNVRNLTKE VFSQEIFVANKTISYFLKAQSSLNQNPIYRYCSVAAKGRGWWFRFGDFENPCNEAFQECFKTGPKQNCKAVGIGDWFARE EELLVVIACANNRLYKAKGNGLQIGLRLISDLAQQAKSDNSTVCSLNVIKPNSIIVYPATEKATIFHSNDNGGSLSVDVL LGSVLIRSYKNSEGILVESGNKYTYPQETIDKINTLQISQSPEISSFFDSENWPSETRNDLRYFQTPEIKPPSRINIPRT FIELFINNIIRGVIDGSQTSEGNNTTTEDSNQQQPNTDDILQ >Mature_442_residues MIIQYTKNFASLTFSILLTLFFFVAEDVAEASTIADAAEISRFKPEPSSTDLMFLGDYKFRRRNPLQIGARLLNLRQYLW MIGNSRAEAFISYVFDGQKDQTLGMKAGPSLKSTQYFFPCHAENGRYVIGWLPADVKQRQCSNPGFTHSFGTNVRNLTKE VFSQEIFVANKTISYFLKAQSSLNQNPIYRYCSVAAKGRGWWFRFGDFENPCNEAFQECFKTGPKQNCKAVGIGDWFARE EELLVVIACANNRLYKAKGNGLQIGLRLISDLAQQAKSDNSTVCSLNVIKPNSIIVYPATEKATIFHSNDNGGSLSVDVL LGSVLIRSYKNSEGILVESGNKYTYPQETIDKINTLQISQSPEISSFFDSENWPSETRNDLRYFQTPEIKPPSRINIPRT FIELFINNIIRGVIDGSQTSEGNNTTTEDSNQQQPNTDDILQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49827; Mature: 49827
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIQYTKNFASLTFSILLTLFFFVAEDVAEASTIADAAEISRFKPEPSSTDLMFLGDYKF CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCC RRRNPLQIGARLLNLRQYLWMIGNSRAEAFISYVFDGQKDQTLGMKAGPSLKSTQYFFPC CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEE HAENGRYVIGWLPADVKQRQCSNPGFTHSFGTNVRNLTKEVFSQEIFVANKTISYFLKAQ ECCCCCEEEEECCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHEEEHHHHHHHHHHH SSLNQNPIYRYCSVAAKGRGWWFRFGDFENPCNEAFQECFKTGPKQNCKAVGIGDWFARE HCCCCCHHHHHHHHEECCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEECCHHHCCC EELLVVIACANNRLYKAKGNGLQIGLRLISDLAQQAKSDNSTVCSLNVIKPNSIIVYPAT CCEEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEECC EKATIFHSNDNGGSLSVDVLLGSVLIRSYKNSEGILVESGNKYTYPQETIDKINTLQISQ CCEEEEECCCCCCEEEHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHCCCCEEEECC SPEISSFFDSENWPSETRNDLRYFQTPEIKPPSRINIPRTFIELFINNIIRGVIDGSQTS CCCHHHHCCCCCCCCHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC EGNNTTTEDSNQQQPNTDDILQ CCCCCCCCCCCCCCCCHHHHCC >Mature Secondary Structure MIIQYTKNFASLTFSILLTLFFFVAEDVAEASTIADAAEISRFKPEPSSTDLMFLGDYKF CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCC RRRNPLQIGARLLNLRQYLWMIGNSRAEAFISYVFDGQKDQTLGMKAGPSLKSTQYFFPC CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEE HAENGRYVIGWLPADVKQRQCSNPGFTHSFGTNVRNLTKEVFSQEIFVANKTISYFLKAQ ECCCCCEEEEECCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHEEEHHHHHHHHHHH SSLNQNPIYRYCSVAAKGRGWWFRFGDFENPCNEAFQECFKTGPKQNCKAVGIGDWFARE HCCCCCHHHHHHHHEECCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEECCHHHCCC EELLVVIACANNRLYKAKGNGLQIGLRLISDLAQQAKSDNSTVCSLNVIKPNSIIVYPAT CCEEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEECC EKATIFHSNDNGGSLSVDVLLGSVLIRSYKNSEGILVESGNKYTYPQETIDKINTLQISQ CCEEEEECCCCCCEEEHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHCCCCEEEECC SPEISSFFDSENWPSETRNDLRYFQTPEIKPPSRINIPRTFIELFINNIIRGVIDGSQTS CCCHHHHCCCCCCCCHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC EGNNTTTEDSNQQQPNTDDILQ CCCCCCCCCCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA