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The map label for this gene is ccmK [H]

Identifier: 158338478

GI number: 158338478

Start: 5441567

End: 5441875

Strand: Direct

Name: ccmK [H]

Synonym: AM1_5380

Alternate gene names: 158338478

Gene position: 5441567-5441875 (Clockwise)

Preceding gene: 158338474

Following gene: 158338479

Centisome position: 83.67

GC content: 49.84

Gene sequence:

>309_bases
ATGCCAATTGCGGTTGGGATGATTGAGACGAAAGGTTTTCCTGCTGTGGTAGAAGCTGCAGATGCGATGGTGAAGGCAGC
TCGTGTAACGCTGGTGGGCTACGAGAAGATTGGTAGCGGCCGCGTCACAGTGATTGTAAGAGGAGATGTTTCTGAGGTTC
AGGCTTCGGTTGCCGCCGGAACAGAATCAGTCCGAAGAGTAAATGGGGGAGAGGTTCTTTCAACTCACATCATTGCTCGT
CCTCATGAGAACCTTGAGTATGTACTACCGATGAGTTACACGGAAGAAGTAGAGCAATTCCGAACGTAA

Upstream 100 bases:

>100_bases
AGTGCTTCCAAATAAAGCTGTTTACTGGCTTTCATGTAAGAATTTTTGGGTAGCAAAATTACCTACTAATATTTAGTGTT
CAATAACAGGAGATGTGGCA

Downstream 100 bases:

>100_bases
CTGCGACCAATCATTAGGTGTGAATATTTACCCAGATTGAGTTCATAGAAGTCTTGCCTTTTTTGGGCAAGACATCATTC
GTAAAGCGAGAGAATGGAGT

Product: carbon dioxide concentrating mechanism protein

Products: NA

Alternate protein names: Carboxysome shell protein CsoS1 [H]

Number of amino acids: Translated: 102; Mature: 101

Protein sequence:

>102_residues
MPIAVGMIETKGFPAVVEAADAMVKAARVTLVGYEKIGSGRVTVIVRGDVSEVQASVAAGTESVRRVNGGEVLSTHIIAR
PHENLEYVLPMSYTEEVEQFRT

Sequences:

>Translated_102_residues
MPIAVGMIETKGFPAVVEAADAMVKAARVTLVGYEKIGSGRVTVIVRGDVSEVQASVAAGTESVRRVNGGEVLSTHIIAR
PHENLEYVLPMSYTEEVEQFRT
>Mature_101_residues
PIAVGMIETKGFPAVVEAADAMVKAARVTLVGYEKIGSGRVTVIVRGDVSEVQASVAAGTESVRRVNGGEVLSTHIIARP
HENLEYVLPMSYTEEVEQFRT

Specific function: May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered [H]

COG id: COG4577

COG function: function code QC; Carbon dioxide concentrating mechanism/carboxysome shell protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial microcompartments protein family [H]

Homologues:

Organism=Escherichia coli, GI87082108, Length=90, Percent_Identity=52.2222222222222, Blast_Score=89, Evalue=7e-20,
Organism=Escherichia coli, GI87082105, Length=85, Percent_Identity=37.6470588235294, Blast_Score=59, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020808
- InterPro:   IPR000249 [H]

Pfam domain/function: PF00936 BMC [H]

EC number: NA

Molecular weight: Translated: 10945; Mature: 10814

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: PS01139 BACT_MICROCOMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIAVGMIETKGFPAVVEAADAMVKAARVTLVGYEKIGSGRVTVIVRGDVSEVQASVAAG
CCEEEEEEECCCCCHHHHHHHHHHHHHHEEEEEEEECCCCEEEEEEECCHHHHHHHHHCC
TESVRRVNGGEVLSTHIIARPHENLEYVLPMSYTEEVEQFRT
CHHHHHCCCCCEEEEEEEECCCCCCEEEECCCHHHHHHHHCC
>Mature Secondary Structure 
PIAVGMIETKGFPAVVEAADAMVKAARVTLVGYEKIGSGRVTVIVRGDVSEVQASVAAG
CEEEEEEECCCCCHHHHHHHHHHHHHHEEEEEEEECCCCEEEEEEECCHHHHHHHHHCC
TESVRRVNGGEVLSTHIIARPHENLEYVLPMSYTEEVEQFRT
CHHHHHCCCCCEEEEEEEECCCCCCEEEECCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA