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The map label for this gene is hcr [C]

Identifier: 158338246

GI number: 158338246

Start: 5204259

End: 5204600

Strand: Reverse

Name: hcr [C]

Synonym: AM1_5141

Alternate gene names: 158338246

Gene position: 5204600-5204259 (Counterclockwise)

Preceding gene: 158338247

Following gene: 158338244

Centisome position: 80.02

GC content: 46.49

Gene sequence:

>342_bases
ATGACAACCTACCAAGTCCGATTTATCAACCCTGACTTAGGACTGGATCAAACGATCACCATTCCAGAGGATGAATACAT
TCTCGATATTGCCGAAGAGAATGACTTACCTCTCCCTGCTGCCTGCAGACAGGGGGATTGTTCAACGTGTGTTGCCCGAC
TCGTGAGTGGAACTGTCGATCAGGCAGAACAGAAATTTTTAAACGCAACGGAGATGGGCCAAGGCTATACCGTTACCTGC
GTGGCCTATCCCCGTTCAGATTGCGTGTTAGAGACTCATCAAGAGCAAACGCTGTATCAAGGGTCTTTATATCAAAAGTC
TGAAGATATGAAGACGACTTAA

Upstream 100 bases:

>100_bases
TAGCGGATTCTGAACCTATTCGAGAATATGAAGAAACCCTCAATAAGGCTAGGGGACTGTTACAAGCCATTCATTGCGTA
CAGGGTGCGTCCACCTGATC

Downstream 100 bases:

>100_bases
GACTGAGTTTGAGCAAACAACATTTCCTTGAGCTTTTCTAACTCGTCAGCCCATCTTGGATCAGGTTGAGCTGCTTCTGC
TTGAGTGTAAGAGCGAGATT

Product: 2Fe-2S type ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MTTYQVRFINPDLGLDQTITIPEDEYILDIAEENDLPLPAACRQGDCSTCVARLVSGTVDQAEQKFLNATEMGQGYTVTC
VAYPRSDCVLETHQEQTLYQGSLYQKSEDMKTT

Sequences:

>Translated_113_residues
MTTYQVRFINPDLGLDQTITIPEDEYILDIAEENDLPLPAACRQGDCSTCVARLVSGTVDQAEQKFLNATEMGQGYTVTC
VAYPRSDCVLETHQEQTLYQGSLYQKSEDMKTT
>Mature_112_residues
TTYQVRFINPDLGLDQTITIPEDEYILDIAEENDLPLPAACRQGDCSTCVARLVSGTVDQAEQKFLNATEMGQGYTVTCV
AYPRSDCVLETHQEQTLYQGSLYQKSEDMKTT

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR010241
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 12635; Mature: 12504

Theoretical pI: Translated: 3.93; Mature: 3.93

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTYQVRFINPDLGLDQTITIPEDEYILDIAEENDLPLPAACRQGDCSTCVARLVSGTVD
CCEEEEEEECCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCC
QAEQKFLNATEMGQGYTVTCVAYPRSDCVLETHQEQTLYQGSLYQKSEDMKTT
HHHHHHHCHHHCCCCEEEEEEEECCCCCEEECCCCHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
TTYQVRFINPDLGLDQTITIPEDEYILDIAEENDLPLPAACRQGDCSTCVARLVSGTVD
CEEEEEEECCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCC
QAEQKFLNATEMGQGYTVTCVAYPRSDCVLETHQEQTLYQGSLYQKSEDMKTT
HHHHHHHCHHHCCCCEEEEEEEECCCCCEEECCCCHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6418732 [H]