| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158338125
Identifier: 158338125
GI number: 158338125
Start: 5061772
End: 5062269
Strand: Reverse
Name: 158338125
Synonym: AM1_5017
Alternate gene names: NA
Gene position: 5062269-5061772 (Counterclockwise)
Preceding gene: 158338127
Following gene: 158338123
Centisome position: 77.84
GC content: 48.39
Gene sequence:
>498_bases ATGTCCGAATCTAAATCCCTAAATTCTGCATCACAGCCAATGGCAGATAAAGTCCAGCGGCTTCATCGTCTGGCCTTTTT GCTAGACAACTCCATCTCTATTCCGGGTACCAAACTCCGTTTTGGACTAGACCCGATCTTGGGCCTTCTAGGAATTGCGG GGGGGAGTGGTGATGTTGTTGGCGGTGCGGTTGGAGCCTATATTGTCTACCAAGCGGCTCAGATGGGAATCCCCAAGGAT GTGGTTTGGCAAATGGTGGTGAATATTCTGCTCGACTCTTTGGTGGGGATTGTGCCGGGGATAGGTGACTTCCTCGACTT TACCTGGAAAGCCAACACCCGCAATATGGCTTTAGTAGATCAACACCTGACCGTGTCATCCCCCCCTAAGAAAGGTAATC CTCTCTTTGTATTGGGAATTACCCTACTGACTGTGCTTATCGTTCTAGGATGCGCTTTCTTGACGTTGCTGTTGATCAAA ACAATTTTTCAGCTTTAG
Upstream 100 bases:
>100_bases TACTAGAAAAAGTATAAATTAGGGAAAGAAATACGGTCTCCAAGCAGGAATATGGCAATGCAGCCAATTCAGTGATAAAG CAGCATAGCAAGCGAGCAAC
Downstream 100 bases:
>100_bases AACAAAAGACTGGGGTGGGACTCCGAAGATTGAATGCCTCTAGCAATCTCCGGTTAATAATCTCCACCCCCACTGCCACT ACCATAATCGCTGCCGCTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MSESKSLNSASQPMADKVQRLHRLAFLLDNSISIPGTKLRFGLDPILGLLGIAGGSGDVVGGAVGAYIVYQAAQMGIPKD VVWQMVVNILLDSLVGIVPGIGDFLDFTWKANTRNMALVDQHLTVSSPPKKGNPLFVLGITLLTVLIVLGCAFLTLLLIK TIFQL
Sequences:
>Translated_165_residues MSESKSLNSASQPMADKVQRLHRLAFLLDNSISIPGTKLRFGLDPILGLLGIAGGSGDVVGGAVGAYIVYQAAQMGIPKD VVWQMVVNILLDSLVGIVPGIGDFLDFTWKANTRNMALVDQHLTVSSPPKKGNPLFVLGITLLTVLIVLGCAFLTLLLIK TIFQL >Mature_164_residues SESKSLNSASQPMADKVQRLHRLAFLLDNSISIPGTKLRFGLDPILGLLGIAGGSGDVVGGAVGAYIVYQAAQMGIPKDV VWQMVVNILLDSLVGIVPGIGDFLDFTWKANTRNMALVDQHLTVSSPPKKGNPLFVLGITLLTVLIVLGCAFLTLLLIKT IFQL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17585; Mature: 17454
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSESKSLNSASQPMADKVQRLHRLAFLLDNSISIPGTKLRFGLDPILGLLGIAGGSGDVV CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHCHHHHHHHHHCCCCCCCCH GGAVGAYIVYQAAQMGIPKDVVWQMVVNILLDSLVGIVPGIGDFLDFTWKANTRNMALVD HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCEEEEE QHLTVSSPPKKGNPLFVLGITLLTVLIVLGCAFLTLLLIKTIFQL CCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SESKSLNSASQPMADKVQRLHRLAFLLDNSISIPGTKLRFGLDPILGLLGIAGGSGDVV CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHCHHHHHHHHHCCCCCCCCH GGAVGAYIVYQAAQMGIPKDVVWQMVVNILLDSLVGIVPGIGDFLDFTWKANTRNMALVD HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCEEEEE QHLTVSSPPKKGNPLFVLGITLLTVLIVLGCAFLTLLLIKTIFQL CCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA