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The map label for this gene is rbn [C]

Identifier: 158338113

GI number: 158338113

Start: 5052019

End: 5053023

Strand: Reverse

Name: rbn [C]

Synonym: AM1_5003

Alternate gene names: 158338113

Gene position: 5053023-5052019 (Counterclockwise)

Preceding gene: 158338114

Following gene: 158338112

Centisome position: 77.69

GC content: 49.45

Gene sequence:

>1005_bases
ATGCCCTTTGATAACGTCTTTTGGTTGCTTAAAGTAACCGGGCTAGAGTGGCAGAGAGATAAAGCCTCTCGGTTGGCAGC
GGCCTTGGCCTACTACACGGCTTTTTCCCTCGCCCCAGTGTTAGTGATTGTGATCGCGATCGCAAGTTTGGCATTTAACC
AAAGCACCGTCCAAGGGCAAGTGATGGCGCAATTCAAAGAATGGTTAGGCCCCGATGGTGCCGCCATTATCCGGGTGATG
GTGCGGGGAACCTACCTACAAGGATCTGGAATGAGAGATACCTTAGGGAGTTTGGTTTTACTGTTTGTCGGCTCCACTGG
ACTCTTCACCAACCTCAAAGATGCCTTGAATTCCATTTGGAAAATTCAGCCTGCACCAGATCGGGGGTGGAAAGGATTTG
TGCGGGATCGGTTCTTTGCCTTTGTCATGGTACTCGGCGTTGGGCTGGTTTTAATCCTGATCTTAGGACTCAGCACCTGG
CTAACGGCGGTCAGTAATAGTGCTAGTACCTATGTCAGCTCTTGGATCCATGTGGGGCGAATCCTAGATTCAGTATTTTC
CTTAAGCATCATCACCTTTATCGTCGCCTTAATTTACAAGTATTTGCCTGATGTCGAGATTCAATGGAGTGATGTCTGGA
TTGGCTCGTTCCTTACATCTCTACTGTTTTCTATAGGGAAGTTTTTGATTAGCCTCTACTTGAGTCGAAACAGTCTCAGT
TCCACCTACGGAGCAGCAGGGTCCCTCGCCGTCGTTTTACTGTGGGTCAATTATTCAGCACAGATTTTCTTTTTTGGCGC
AGAGCTAACCAAGGTCTATACCAATCGCTTTGGCTCCCAGATTCGCCCCGCCCATTATGCGACCGCCCTCCAAGATCCCG
TCACTCTGCCGGAATCCTCTCAACCCAACGCTCAAAAAGCGGCCTCATCTTCAGGTAACTCCCCCATCCAGCAATTGCCG
CAGTGGTTGAAAAAAATATTTCATCGCAACGCCCCTCGCTCCTAG

Upstream 100 bases:

>100_bases
AAGCACCGTTACTCATCCCAAGGGATAACCATTTAGCTCCAGCCTATTGTTAAAACTCTCCCTTGCTCCAATCGTCGTCA
ACTCTTGCAGGAGACACAGC

Downstream 100 bases:

>100_bases
ACTCACCCGTGGAGCCATGTCCAACAACCGTTAACGGATCCTCGATCCATGACTAAACTGATGACTAAGCTCCGCACCTA
CTTCAGCAAAAGCCGTCGAG

Product: ribonuclease BN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 333

Protein sequence:

>334_residues
MPFDNVFWLLKVTGLEWQRDKASRLAAALAYYTAFSLAPVLVIVIAIASLAFNQSTVQGQVMAQFKEWLGPDGAAIIRVM
VRGTYLQGSGMRDTLGSLVLLFVGSTGLFTNLKDALNSIWKIQPAPDRGWKGFVRDRFFAFVMVLGVGLVLILILGLSTW
LTAVSNSASTYVSSWIHVGRILDSVFSLSIITFIVALIYKYLPDVEIQWSDVWIGSFLTSLLFSIGKFLISLYLSRNSLS
STYGAAGSLAVVLLWVNYSAQIFFFGAELTKVYTNRFGSQIRPAHYATALQDPVTLPESSQPNAQKAASSSGNSPIQQLP
QWLKKIFHRNAPRS

Sequences:

>Translated_334_residues
MPFDNVFWLLKVTGLEWQRDKASRLAAALAYYTAFSLAPVLVIVIAIASLAFNQSTVQGQVMAQFKEWLGPDGAAIIRVM
VRGTYLQGSGMRDTLGSLVLLFVGSTGLFTNLKDALNSIWKIQPAPDRGWKGFVRDRFFAFVMVLGVGLVLILILGLSTW
LTAVSNSASTYVSSWIHVGRILDSVFSLSIITFIVALIYKYLPDVEIQWSDVWIGSFLTSLLFSIGKFLISLYLSRNSLS
STYGAAGSLAVVLLWVNYSAQIFFFGAELTKVYTNRFGSQIRPAHYATALQDPVTLPESSQPNAQKAASSSGNSPIQQLP
QWLKKIFHRNAPRS
>Mature_333_residues
PFDNVFWLLKVTGLEWQRDKASRLAAALAYYTAFSLAPVLVIVIAIASLAFNQSTVQGQVMAQFKEWLGPDGAAIIRVMV
RGTYLQGSGMRDTLGSLVLLFVGSTGLFTNLKDALNSIWKIQPAPDRGWKGFVRDRFFAFVMVLGVGLVLILILGLSTWL
TAVSNSASTYVSSWIHVGRILDSVFSLSIITFIVALIYKYLPDVEIQWSDVWIGSFLTSLLFSIGKFLISLYLSRNSLSS
TYGAAGSLAVVLLWVNYSAQIFFFGAELTKVYTNRFGSQIRPAHYATALQDPVTLPESSQPNAQKAASSSGNSPIQQLPQ
WLKKIFHRNAPRS

Specific function: 3' To 5' Exoribonuclease Necessary For 3'Maturation Of tRNA Molecules. [C]

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:
GO:0004540: Ribonuclease BN
GO:0005886: Ribonuclease BN
GO:0016020: Ribonuclease BN
GO:0016021: Ribonuclease BN

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0761 family [H]

Homologues:

Organism=Escherichia coli, GI1790319, Length=270, Percent_Identity=27.7777777777778, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017039
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 36837; Mature: 36706

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PFDNVFWLLKVTGLEWQRDKASRLAAALAYYTAFSLAPVLVIVIAIASLAFNQSTVQGQ
CCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
VMAQFKEWLGPDGAAIIRVMVRGTYLQGSGMRDTLGSLVLLFVGSTGLFTNLKDALNSIW
HHHHHHHHHCCCHHHHHHHHHHCCEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHE
KIQPAPDRGWKGFVRDRFFAFVMVLGVGLVLILILGLSTWLTAVSNSASTYVSSWIHVGR
ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
ILDSVFSLSIITFIVALIYKYLPDVEIQWSDVWIGSFLTSLLFSIGKFLISLYLSRNSLS
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
STYGAAGSLAVVLLWVNYSAQIFFFGAELTKVYTNRFGSQIRPAHYATALQDPVTLPESS
HHHCCCHHHHHHHEEECCCCEEEEEHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCC
QPNAQKAASSSGNSPIQQLPQWLKKIFHRNAPRS
CCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA