| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158338112
Identifier: 158338112
GI number: 158338112
Start: 5050837
End: 5051958
Strand: Reverse
Name: 158338112
Synonym: AM1_5002
Alternate gene names: NA
Gene position: 5051958-5050837 (Counterclockwise)
Preceding gene: 158338113
Following gene: 158338111
Centisome position: 77.68
GC content: 50.45
Gene sequence:
>1122_bases ATGACTAAGCTCCGCACCTACTTCAGCAAAAGCCGTCGAGGCTTACATTCAGCTCAAAAAGAAGTCGCTGAGCTGTGGCA CCAAAACAGTGGCGATTGGAGCTGGGCTGCCGAAAAGCCCCGACCCGTTGCCGCCGTCAATCGGAGTTTATGGAAAAGCT CCGTGCCTTCCCTCAGCTTCTATGCCATGTTGGGTTTGTCCAGCGTTATTGCCACCCTAGGACTACTCTCAGGTAGCGCT GCAGTGATTATTGGAGCCATGATTATAGCCCCTTTGATGGGGTCTATTATTGGTATCGCCTATGCGATTGTGATGGGCAA TCGTCGCCTCCTCAAGCGGTCTGCCCTGACCACATTTAAGGGAATCTTGCTGTCCATCCTAGCGGCAACCCTGATTACGC TGCTGTTTGGATTAACTCAAACCAATTCAGAAATCTTGGCTCGGGTTCGTCCCACCCTGATTGATCTGGGGGTTGCGCTT GCGGCTGGCGCTGCAGGGGCTTTTGCTATTTCTCGTCGTCAAGTTGAGAATGCTTTATCCGGAGTTGCTATCTCTGTAGC TCTTGTTCCCCCTTTAAGCGTGATCGGCATCGGTATTGCCTGGTGGAATGCTCGTGTCGCATTGGGGGCCAGCATTCTGT TTGCCACCAACCTGACGGGTATTATCTTCAGTGGGGCACTGGTCTTTCTCTGGCAACAGTACGGTTCCCTTGAGCGAGCA AAGAAGGGCTTATTTGCAGGGTTTCTAGCCCTGTTTCTGCTCGGTATTCCGTTGGGTTTGTCGCTGCGAAATATCTTGGT AGAAGAGCATGTACATCGACAGGTGGCTGCCCTCCTGCGTCGGCAGACCCTAACCTTTGCCGATACGGAAATCAAAAATA TTGAGGTTCAGCCTCAGCTAAACGGCCTGCGGGTGGAATTAGAGGTAGCAGCTAAAGCAGACTCCATTTCCCAATACCAA GTCCGACTGGTGAGACAATTTTTGATAGAACAGTTAGGACAGCCCATTCAATTAAAAGTACGGGTCGTCCCGACAGAAAT TTTTGAGGAAATATCCCATACTGCGAGTGACTCCCAAGTCGTTCATTCCACCAATAGACATCATTCTTCAACAGGGTTTT AA
Upstream 100 bases:
>100_bases GTTGAAAAAAATATTTCATCGCAACGCCCCTCGCTCCTAGACTCACCCGTGGAGCCATGTCCAACAACCGTTAACGGATC CTCGATCCATGACTAAACTG
Downstream 100 bases:
>100_bases GAATTTGCCCCTATCAGCTCAATCTTTCTAGGACCGAATGTTTCAGGACTATGCATTCTCTGGGAGGGCCATGATCAGTA CCGTCAACAGAGCCTTGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 373; Mature: 372
Protein sequence:
>373_residues MTKLRTYFSKSRRGLHSAQKEVAELWHQNSGDWSWAAEKPRPVAAVNRSLWKSSVPSLSFYAMLGLSSVIATLGLLSGSA AVIIGAMIIAPLMGSIIGIAYAIVMGNRRLLKRSALTTFKGILLSILAATLITLLFGLTQTNSEILARVRPTLIDLGVAL AAGAAGAFAISRRQVENALSGVAISVALVPPLSVIGIGIAWWNARVALGASILFATNLTGIIFSGALVFLWQQYGSLERA KKGLFAGFLALFLLGIPLGLSLRNILVEEHVHRQVAALLRRQTLTFADTEIKNIEVQPQLNGLRVELEVAAKADSISQYQ VRLVRQFLIEQLGQPIQLKVRVVPTEIFEEISHTASDSQVVHSTNRHHSSTGF
Sequences:
>Translated_373_residues MTKLRTYFSKSRRGLHSAQKEVAELWHQNSGDWSWAAEKPRPVAAVNRSLWKSSVPSLSFYAMLGLSSVIATLGLLSGSA AVIIGAMIIAPLMGSIIGIAYAIVMGNRRLLKRSALTTFKGILLSILAATLITLLFGLTQTNSEILARVRPTLIDLGVAL AAGAAGAFAISRRQVENALSGVAISVALVPPLSVIGIGIAWWNARVALGASILFATNLTGIIFSGALVFLWQQYGSLERA KKGLFAGFLALFLLGIPLGLSLRNILVEEHVHRQVAALLRRQTLTFADTEIKNIEVQPQLNGLRVELEVAAKADSISQYQ VRLVRQFLIEQLGQPIQLKVRVVPTEIFEEISHTASDSQVVHSTNRHHSSTGF >Mature_372_residues TKLRTYFSKSRRGLHSAQKEVAELWHQNSGDWSWAAEKPRPVAAVNRSLWKSSVPSLSFYAMLGLSSVIATLGLLSGSAA VIIGAMIIAPLMGSIIGIAYAIVMGNRRLLKRSALTTFKGILLSILAATLITLLFGLTQTNSEILARVRPTLIDLGVALA AGAAGAFAISRRQVENALSGVAISVALVPPLSVIGIGIAWWNARVALGASILFATNLTGIIFSGALVFLWQQYGSLERAK KGLFAGFLALFLLGIPLGLSLRNILVEEHVHRQVAALLRRQTLTFADTEIKNIEVQPQLNGLRVELEVAAKADSISQYQV RLVRQFLIEQLGQPIQLKVRVVPTEIFEEISHTASDSQVVHSTNRHHSSTGF
Specific function: Unknown
COG id: COG1808
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI19921100, Length=215, Percent_Identity=28.8372093023256, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005233 - InterPro: IPR013031 - InterPro: IPR005240 [H]
Pfam domain/function: PF04087 DUF389 [H]
EC number: NA
Molecular weight: Translated: 40359; Mature: 40228
Theoretical pI: Translated: 11.05; Mature: 11.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKLRTYFSKSRRGLHSAQKEVAELWHQNSGDWSWAAEKPRPVAAVNRSLWKSSVPSLSF CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHH YAMLGLSSVIATLGLLSGSAAVIIGAMIIAPLMGSIIGIAYAIVMGNRRLLKRSALTTFK HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH GILLSILAATLITLLFGLTQTNSEILARVRPTLIDLGVALAAGAAGAFAISRRQVENALS HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC GVAISVALVPPLSVIGIGIAWWNARVALGASILFATNLTGIIFSGALVFLWQQYGSLERA CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH KKGLFAGFLALFLLGIPLGLSLRNILVEEHVHRQVAALLRRQTLTFADTEIKNIEVQPQL HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCEEECCCC NGLRVELEVAAKADSISQYQVRLVRQFLIEQLGQPIQLKVRVVPTEIFEEISHTASDSQV CCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECHHHHHHHHCCCCCCHH VHSTNRHHSSTGF HHCCCCCCCCCCC >Mature Secondary Structure TKLRTYFSKSRRGLHSAQKEVAELWHQNSGDWSWAAEKPRPVAAVNRSLWKSSVPSLSF CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHH YAMLGLSSVIATLGLLSGSAAVIIGAMIIAPLMGSIIGIAYAIVMGNRRLLKRSALTTFK HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH GILLSILAATLITLLFGLTQTNSEILARVRPTLIDLGVALAAGAAGAFAISRRQVENALS HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC GVAISVALVPPLSVIGIGIAWWNARVALGASILFATNLTGIIFSGALVFLWQQYGSLERA CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH KKGLFAGFLALFLLGIPLGLSLRNILVEEHVHRQVAALLRRQTLTFADTEIKNIEVQPQL HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCEEECCCC NGLRVELEVAAKADSISQYQVRLVRQFLIEQLGQPIQLKVRVVPTEIFEEISHTASDSQV CCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECHHHHHHHHCCCCCCHH VHSTNRHHSSTGF HHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]