Definition Acaryochloris marina MBIC11017 chromosome, complete genome.
Accession NC_009925
Length 6,503,724

Click here to switch to the map view.

The map label for this gene is 158338112

Identifier: 158338112

GI number: 158338112

Start: 5050837

End: 5051958

Strand: Reverse

Name: 158338112

Synonym: AM1_5002

Alternate gene names: NA

Gene position: 5051958-5050837 (Counterclockwise)

Preceding gene: 158338113

Following gene: 158338111

Centisome position: 77.68

GC content: 50.45

Gene sequence:

>1122_bases
ATGACTAAGCTCCGCACCTACTTCAGCAAAAGCCGTCGAGGCTTACATTCAGCTCAAAAAGAAGTCGCTGAGCTGTGGCA
CCAAAACAGTGGCGATTGGAGCTGGGCTGCCGAAAAGCCCCGACCCGTTGCCGCCGTCAATCGGAGTTTATGGAAAAGCT
CCGTGCCTTCCCTCAGCTTCTATGCCATGTTGGGTTTGTCCAGCGTTATTGCCACCCTAGGACTACTCTCAGGTAGCGCT
GCAGTGATTATTGGAGCCATGATTATAGCCCCTTTGATGGGGTCTATTATTGGTATCGCCTATGCGATTGTGATGGGCAA
TCGTCGCCTCCTCAAGCGGTCTGCCCTGACCACATTTAAGGGAATCTTGCTGTCCATCCTAGCGGCAACCCTGATTACGC
TGCTGTTTGGATTAACTCAAACCAATTCAGAAATCTTGGCTCGGGTTCGTCCCACCCTGATTGATCTGGGGGTTGCGCTT
GCGGCTGGCGCTGCAGGGGCTTTTGCTATTTCTCGTCGTCAAGTTGAGAATGCTTTATCCGGAGTTGCTATCTCTGTAGC
TCTTGTTCCCCCTTTAAGCGTGATCGGCATCGGTATTGCCTGGTGGAATGCTCGTGTCGCATTGGGGGCCAGCATTCTGT
TTGCCACCAACCTGACGGGTATTATCTTCAGTGGGGCACTGGTCTTTCTCTGGCAACAGTACGGTTCCCTTGAGCGAGCA
AAGAAGGGCTTATTTGCAGGGTTTCTAGCCCTGTTTCTGCTCGGTATTCCGTTGGGTTTGTCGCTGCGAAATATCTTGGT
AGAAGAGCATGTACATCGACAGGTGGCTGCCCTCCTGCGTCGGCAGACCCTAACCTTTGCCGATACGGAAATCAAAAATA
TTGAGGTTCAGCCTCAGCTAAACGGCCTGCGGGTGGAATTAGAGGTAGCAGCTAAAGCAGACTCCATTTCCCAATACCAA
GTCCGACTGGTGAGACAATTTTTGATAGAACAGTTAGGACAGCCCATTCAATTAAAAGTACGGGTCGTCCCGACAGAAAT
TTTTGAGGAAATATCCCATACTGCGAGTGACTCCCAAGTCGTTCATTCCACCAATAGACATCATTCTTCAACAGGGTTTT
AA

Upstream 100 bases:

>100_bases
GTTGAAAAAAATATTTCATCGCAACGCCCCTCGCTCCTAGACTCACCCGTGGAGCCATGTCCAACAACCGTTAACGGATC
CTCGATCCATGACTAAACTG

Downstream 100 bases:

>100_bases
GAATTTGCCCCTATCAGCTCAATCTTTCTAGGACCGAATGTTTCAGGACTATGCATTCTCTGGGAGGGCCATGATCAGTA
CCGTCAACAGAGCCTTGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 372

Protein sequence:

>373_residues
MTKLRTYFSKSRRGLHSAQKEVAELWHQNSGDWSWAAEKPRPVAAVNRSLWKSSVPSLSFYAMLGLSSVIATLGLLSGSA
AVIIGAMIIAPLMGSIIGIAYAIVMGNRRLLKRSALTTFKGILLSILAATLITLLFGLTQTNSEILARVRPTLIDLGVAL
AAGAAGAFAISRRQVENALSGVAISVALVPPLSVIGIGIAWWNARVALGASILFATNLTGIIFSGALVFLWQQYGSLERA
KKGLFAGFLALFLLGIPLGLSLRNILVEEHVHRQVAALLRRQTLTFADTEIKNIEVQPQLNGLRVELEVAAKADSISQYQ
VRLVRQFLIEQLGQPIQLKVRVVPTEIFEEISHTASDSQVVHSTNRHHSSTGF

Sequences:

>Translated_373_residues
MTKLRTYFSKSRRGLHSAQKEVAELWHQNSGDWSWAAEKPRPVAAVNRSLWKSSVPSLSFYAMLGLSSVIATLGLLSGSA
AVIIGAMIIAPLMGSIIGIAYAIVMGNRRLLKRSALTTFKGILLSILAATLITLLFGLTQTNSEILARVRPTLIDLGVAL
AAGAAGAFAISRRQVENALSGVAISVALVPPLSVIGIGIAWWNARVALGASILFATNLTGIIFSGALVFLWQQYGSLERA
KKGLFAGFLALFLLGIPLGLSLRNILVEEHVHRQVAALLRRQTLTFADTEIKNIEVQPQLNGLRVELEVAAKADSISQYQ
VRLVRQFLIEQLGQPIQLKVRVVPTEIFEEISHTASDSQVVHSTNRHHSSTGF
>Mature_372_residues
TKLRTYFSKSRRGLHSAQKEVAELWHQNSGDWSWAAEKPRPVAAVNRSLWKSSVPSLSFYAMLGLSSVIATLGLLSGSAA
VIIGAMIIAPLMGSIIGIAYAIVMGNRRLLKRSALTTFKGILLSILAATLITLLFGLTQTNSEILARVRPTLIDLGVALA
AGAAGAFAISRRQVENALSGVAISVALVPPLSVIGIGIAWWNARVALGASILFATNLTGIIFSGALVFLWQQYGSLERAK
KGLFAGFLALFLLGIPLGLSLRNILVEEHVHRQVAALLRRQTLTFADTEIKNIEVQPQLNGLRVELEVAAKADSISQYQV
RLVRQFLIEQLGQPIQLKVRVVPTEIFEEISHTASDSQVVHSTNRHHSSTGF

Specific function: Unknown

COG id: COG1808

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Drosophila melanogaster, GI19921100, Length=215, Percent_Identity=28.8372093023256, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005233
- InterPro:   IPR013031
- InterPro:   IPR005240 [H]

Pfam domain/function: PF04087 DUF389 [H]

EC number: NA

Molecular weight: Translated: 40359; Mature: 40228

Theoretical pI: Translated: 11.05; Mature: 11.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCCCCCCCCCCC
>Mature Secondary Structure 
TKLRTYFSKSRRGLHSAQKEVAELWHQNSGDWSWAAEKPRPVAAVNRSLWKSSVPSLSF
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHH
YAMLGLSSVIATLGLLSGSAAVIIGAMIIAPLMGSIIGIAYAIVMGNRRLLKRSALTTFK
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
GILLSILAATLITLLFGLTQTNSEILARVRPTLIDLGVALAAGAAGAFAISRRQVENALS
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC
GVAISVALVPPLSVIGIGIAWWNARVALGASILFATNLTGIIFSGALVFLWQQYGSLERA
CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
KKGLFAGFLALFLLGIPLGLSLRNILVEEHVHRQVAALLRRQTLTFADTEIKNIEVQPQL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCEEECCCC
NGLRVELEVAAKADSISQYQVRLVRQFLIEQLGQPIQLKVRVVPTEIFEEISHTASDSQV
CCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECHHHHHHHHCCCCCCHH
VHSTNRHHSSTGF
HHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]