| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
Click here to switch to the map view.
The map label for this gene is 158338055
Identifier: 158338055
GI number: 158338055
Start: 4979891
End: 4981120
Strand: Reverse
Name: 158338055
Synonym: AM1_4942
Alternate gene names: NA
Gene position: 4981120-4979891 (Counterclockwise)
Preceding gene: 158338056
Following gene: 158338054
Centisome position: 76.59
GC content: 51.54
Gene sequence:
>1230_bases ATGATGAGACGGCGACAATTTTTACAGTATGCAGCTGCCTCAGGTGTGACCGCGATGGGGTTGGGTTGGTTAGGGAAGCA ACCCGTTTATTCCCAAAGCTTCTCTGGGCGTCAACCCAAACTAATTGTGATTCTCTTGCGGGGAGCAGTAGATGGCCTGA ATGTGGTCGTTCCCTACCGAGAGTCAGGTTATTACGATGCGCGACCGACCTTAGCCATCGCCAAACCTGGCGAAGCGAGA GGGGCCATTGATTTAGATGGACAGTTTGGCTTGCATCCAGCTTTAGCAGATCTGATGCCTTTGTGGAAATCGAGGCAGTT AGCCTTTGTCCATGCTTGTGGATCGCCGGATCCAACCCGTTCCCACTTTGATGCTCAGGATTATATGGAGCTGGGAACAC CGGGGAATAAAAAACAGGGAGATGGCTGGTTAAATCGAGTATTAGCTCACTTACCCGCAGGCCGCCCCACCCAAGCCCTT AATCTGGGCAATCAGACGCCCTTAATTTTGTCGGGGTCTAAGTCGGTGGCGAACCTAGCCTTTGGACGGCAGGCCATCCG GCCTTTGCCTTTGGATCGACCGCCAATTCAATCTGCATTTGATCGCCTGTATGAAGGCGCTACCAATCTGAGTCGTGCCT ATCAGGAAGGCTTAGAAGCGAGGGAGATCCTCAAAGCTGAACTCAATACAGAAATGATGAAAGCGTCCAGGGGAGCACCG GGGCCATCTAGTCTGAAGACGAATGGTCGTCGGATTGCTCAACTGTTGAGTGGAGATGCCGAAACCCAAATTGCCTTTGT CTCTCTAGGAGGCTGGGATACCCATATCAATCAAGGGTCCTCCCAAGGTCGTCTAGCGCGGTTGCTTAAACCCTTGGGGC AGGGATTGAATCAAATCAAAGCAGACCTGGGCAAAACCTTTGATGACACGACAATTGTGGTGATGTCTGAGTTTGGCCGC ACGGTAGCTGAAAATGGCAATGGCGGTACGGATCATGGCCATGGCAATGTCCTTTGGGTGTTGGGTGGACAGATTCAAGG GGGCAAGGTTTATGGGGAGTGGCCAGGGTTAGCTGAATCCCAGCGCTATCAAGGACGAGACCTAGAAATTACGACGGATT TTAGAGATGCGATCGCACCGTTGCTCACCAAAGGAATGGGTATTGAATCAAAGCACCTCAACCAAATTTTCCCTGGATAT TCTCCCCAGACTCCGCTTGGGCTGATTTAG
Upstream 100 bases:
>100_bases GTCCGCGAAATTTACGGGCGGCATTGATGCTGGGCAGCCCTGAAATGATGTATCGCTAAACCGATTCCTGAACGAATTGA CAACCCTGAGAATAGAAATA
Downstream 100 bases:
>100_bases GAAAGGGACTGGCCTATCTGACTAAATCAGAATGTTAAGCTGCTTTAGTGAGAAGTTTAAAGGGAATTCCAAATGAATAC GGAGCAACAGACTCAAATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MMRRRQFLQYAAASGVTAMGLGWLGKQPVYSQSFSGRQPKLIVILLRGAVDGLNVVVPYRESGYYDARPTLAIAKPGEAR GAIDLDGQFGLHPALADLMPLWKSRQLAFVHACGSPDPTRSHFDAQDYMELGTPGNKKQGDGWLNRVLAHLPAGRPTQAL NLGNQTPLILSGSKSVANLAFGRQAIRPLPLDRPPIQSAFDRLYEGATNLSRAYQEGLEAREILKAELNTEMMKASRGAP GPSSLKTNGRRIAQLLSGDAETQIAFVSLGGWDTHINQGSSQGRLARLLKPLGQGLNQIKADLGKTFDDTTIVVMSEFGR TVAENGNGGTDHGHGNVLWVLGGQIQGGKVYGEWPGLAESQRYQGRDLEITTDFRDAIAPLLTKGMGIESKHLNQIFPGY SPQTPLGLI
Sequences:
>Translated_409_residues MMRRRQFLQYAAASGVTAMGLGWLGKQPVYSQSFSGRQPKLIVILLRGAVDGLNVVVPYRESGYYDARPTLAIAKPGEAR GAIDLDGQFGLHPALADLMPLWKSRQLAFVHACGSPDPTRSHFDAQDYMELGTPGNKKQGDGWLNRVLAHLPAGRPTQAL NLGNQTPLILSGSKSVANLAFGRQAIRPLPLDRPPIQSAFDRLYEGATNLSRAYQEGLEAREILKAELNTEMMKASRGAP GPSSLKTNGRRIAQLLSGDAETQIAFVSLGGWDTHINQGSSQGRLARLLKPLGQGLNQIKADLGKTFDDTTIVVMSEFGR TVAENGNGGTDHGHGNVLWVLGGQIQGGKVYGEWPGLAESQRYQGRDLEITTDFRDAIAPLLTKGMGIESKHLNQIFPGY SPQTPLGLI >Mature_409_residues MMRRRQFLQYAAASGVTAMGLGWLGKQPVYSQSFSGRQPKLIVILLRGAVDGLNVVVPYRESGYYDARPTLAIAKPGEAR GAIDLDGQFGLHPALADLMPLWKSRQLAFVHACGSPDPTRSHFDAQDYMELGTPGNKKQGDGWLNRVLAHLPAGRPTQAL NLGNQTPLILSGSKSVANLAFGRQAIRPLPLDRPPIQSAFDRLYEGATNLSRAYQEGLEAREILKAELNTEMMKASRGAP GPSSLKTNGRRIAQLLSGDAETQIAFVSLGGWDTHINQGSSQGRLARLLKPLGQGLNQIKADLGKTFDDTTIVVMSEFGR TVAENGNGGTDHGHGNVLWVLGGQIQGGKVYGEWPGLAESQRYQGRDLEITTDFRDAIAPLLTKGMGIESKHLNQIFPGY SPQTPLGLI
Specific function: Unknown
COG id: COG4102
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44216; Mature: 44216
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRRRQFLQYAAASGVTAMGLGWLGKQPVYSQSFSGRQPKLIVILLRGAVDGLNVVVPYR CCHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECC ESGYYDARPTLAIAKPGEARGAIDLDGQFGLHPALADLMPLWKSRQLAFVHACGSPDPTR CCCCCCCCCEEEEECCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCC SHFDAQDYMELGTPGNKKQGDGWLNRVLAHLPAGRPTQALNLGNQTPLILSGSKSVANLA CCCCHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCCCCEEEECCCHHHHHH FGRQAIRPLPLDRPPIQSAFDRLYEGATNLSRAYQEGLEAREILKAELNTEMMKASRGAP HHHHHCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GPSSLKTNGRRIAQLLSGDAETQIAFVSLGGWDTHINQGSSQGRLARLLKPLGQGLNQIK CCCHHHCCHHHHHHHHCCCCCCEEEEEEECCCHHCCCCCCCCHHHHHHHHHHHHHHHHHH ADLGKTFDDTTIVVMSEFGRTVAENGNGGTDHGHGNVLWVLGGQIQGGKVYGEWPGLAES HHHCCCCCCCEEEEEHHHCHHHHCCCCCCCCCCCCCEEEEECCEEECCEEEECCCCCCCC QRYQGRDLEITTDFRDAIAPLLTKGMGIESKHLNQIFPGYSPQTPLGLI HHCCCCCEEEECCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MMRRRQFLQYAAASGVTAMGLGWLGKQPVYSQSFSGRQPKLIVILLRGAVDGLNVVVPYR CCHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECC ESGYYDARPTLAIAKPGEARGAIDLDGQFGLHPALADLMPLWKSRQLAFVHACGSPDPTR CCCCCCCCCEEEEECCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCC SHFDAQDYMELGTPGNKKQGDGWLNRVLAHLPAGRPTQALNLGNQTPLILSGSKSVANLA CCCCHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCCCCEEEECCCHHHHHH FGRQAIRPLPLDRPPIQSAFDRLYEGATNLSRAYQEGLEAREILKAELNTEMMKASRGAP HHHHHCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GPSSLKTNGRRIAQLLSGDAETQIAFVSLGGWDTHINQGSSQGRLARLLKPLGQGLNQIK CCCHHHCCHHHHHHHHCCCCCCEEEEEEECCCHHCCCCCCCCHHHHHHHHHHHHHHHHHH ADLGKTFDDTTIVVMSEFGRTVAENGNGGTDHGHGNVLWVLGGQIQGGKVYGEWPGLAES HHHCCCCCCCEEEEEHHHCHHHHCCCCCCCCCCCCCEEEEECCEEECCEEEECCCCCCCC QRYQGRDLEITTDFRDAIAPLLTKGMGIESKHLNQIFPGYSPQTPLGLI HHCCCCCEEEECCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA