| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158338056
Identifier: 158338056
GI number: 158338056
Start: 4981162
End: 4982649
Strand: Reverse
Name: 158338056
Synonym: AM1_4943
Alternate gene names: NA
Gene position: 4982649-4981162 (Counterclockwise)
Preceding gene: 158338058
Following gene: 158338055
Centisome position: 76.61
GC content: 50.07
Gene sequence:
>1488_bases ATGGCAAAATTTTCAGACAAAATACTCAAAATCTCCCTTAGTCTCATGCTGGCCGTGGGAATTTGGATAGGGAGTACCAA CGGAGAACCAGCGCTGGCTACCTCGATGGAGGCTGATGCGGTTCATGTCATCAATCGCCTTAGCTTTGGTCCCAGTCCAG GGGATCTGCAGCATGTGAAGACGGTAGGGATTGATGATTATATTCAAGAACAGCTTTCACCTAGTCAAGATTCACCTAGA CTGAAGCGTCAACTGCGGCAGTATAAAACCTTGTCTCTCACACCGATACAACTAGAGCGGCAATATGGCTTTAGACGACC AGGTAGGGGGAAGCCCAAGCTCAGCCCCCAAGAACGCAAACAGCGCCGACGTCGATCTCGTATCCCTTTTCGCGAGGCCT CTGAAGCTCGGTTGATTCGGGCGATTTCTAGTCCGAACCAACTGGAAGAAGTGATGGTGAACTTCTGGTTCAATCACTTC AACGTATCCGCCAAAAAAGGGAGAACCCGATTATGGGTCGGTGCTTATGAAGAAGAGGCGATTCGCCCCTATGTCTTCGG TTCTTTTCGCGATTTATTGGGGGCAACAGCCAAACATCCGGCCATGTTGTTTTATCTTGATAATTGGCAAAATACAGCCC CCAATAGCCCTGGAGCCCGAGGTCGGTTTAAGGGATTAAACGAGAATTATGCCCGGGAGTTGCTGGAACTCCACACAATG GGGGTTAAGGGTGGCTATTCCCAGGCTGATGTGGTGTCAGCCGCGAAAGTATTAACCGGGTGGGGGTTACCCCGAGGCCG CCAGAGATTACAAGCTAAACAGGCCTTTGTCTTTGATGCTAGACGCCATGACAATAGCCGTAAAACGTTTCTGGGACAAC CCATTCAGGGGCAAGGAATGGCAGAAGGGGAAGAACTGCTAGATATATTGGCGACCCATCCAGCCACTGCCCAACATATA AGCTATAAGTTAGCCCAGTATTTTGTGGCGGATACACCTCCCCCAGCTTTAGTAGATCGTCTGGCTCAACGATTCCTAGC AACCGATGGCAATATTCGATCAGTGTTAGAAACCTTATTTGAGAGTCCTGAGTTTAGAGAGCCTCGGTACTATGGACAGA AATTTAAAACCCCTTATGAATATCTGATTTCAGTGGCGAGAGCCACGGGGCGTCCCACGGTGAAACCTCTCTTGGTGGCT AGAGCGCTACGGCAGTTCAGTATGCCCCTGTATGAATGCCAACCCCCTAATGGGTATGCCAACACTGAAGCGGCTTGGCT CAATCCGGATACCACCATTCGCCGAATCAGTTTAGCGACCGCGTTTGCCCGGGGCTATGGCCGACAAAAGACACCTGTGC CACCAGACCAATTAGAGCAAACCTTAGGAGATCGGTTTTCTGCTCAAACGAAAGCTGTGATTGATAACAGTCCGCGAAAT TTACGGGCGGCATTGATGCTGGGCAGCCCTGAAATGATGTATCGCTAA
Upstream 100 bases:
>100_bases TATTTATCGACTAGTTTCACCAGAAACAAAATATTGATGGTTTTGTCATTGAACCTAATTCGGACAACGGCTGTCTAAGA ATTAGGCTACACCACAGAAT
Downstream 100 bases:
>100_bases ACCGATTCCTGAACGAATTGACAACCCTGAGAATAGAAATAATGATGAGACGGCGACAATTTTTACAGTATGCAGCTGCC TCAGGTGTGACCGCGATGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 495; Mature: 494
Protein sequence:
>495_residues MAKFSDKILKISLSLMLAVGIWIGSTNGEPALATSMEADAVHVINRLSFGPSPGDLQHVKTVGIDDYIQEQLSPSQDSPR LKRQLRQYKTLSLTPIQLERQYGFRRPGRGKPKLSPQERKQRRRRSRIPFREASEARLIRAISSPNQLEEVMVNFWFNHF NVSAKKGRTRLWVGAYEEEAIRPYVFGSFRDLLGATAKHPAMLFYLDNWQNTAPNSPGARGRFKGLNENYARELLELHTM GVKGGYSQADVVSAAKVLTGWGLPRGRQRLQAKQAFVFDARRHDNSRKTFLGQPIQGQGMAEGEELLDILATHPATAQHI SYKLAQYFVADTPPPALVDRLAQRFLATDGNIRSVLETLFESPEFREPRYYGQKFKTPYEYLISVARATGRPTVKPLLVA RALRQFSMPLYECQPPNGYANTEAAWLNPDTTIRRISLATAFARGYGRQKTPVPPDQLEQTLGDRFSAQTKAVIDNSPRN LRAALMLGSPEMMYR
Sequences:
>Translated_495_residues MAKFSDKILKISLSLMLAVGIWIGSTNGEPALATSMEADAVHVINRLSFGPSPGDLQHVKTVGIDDYIQEQLSPSQDSPR LKRQLRQYKTLSLTPIQLERQYGFRRPGRGKPKLSPQERKQRRRRSRIPFREASEARLIRAISSPNQLEEVMVNFWFNHF NVSAKKGRTRLWVGAYEEEAIRPYVFGSFRDLLGATAKHPAMLFYLDNWQNTAPNSPGARGRFKGLNENYARELLELHTM GVKGGYSQADVVSAAKVLTGWGLPRGRQRLQAKQAFVFDARRHDNSRKTFLGQPIQGQGMAEGEELLDILATHPATAQHI SYKLAQYFVADTPPPALVDRLAQRFLATDGNIRSVLETLFESPEFREPRYYGQKFKTPYEYLISVARATGRPTVKPLLVA RALRQFSMPLYECQPPNGYANTEAAWLNPDTTIRRISLATAFARGYGRQKTPVPPDQLEQTLGDRFSAQTKAVIDNSPRN LRAALMLGSPEMMYR >Mature_494_residues AKFSDKILKISLSLMLAVGIWIGSTNGEPALATSMEADAVHVINRLSFGPSPGDLQHVKTVGIDDYIQEQLSPSQDSPRL KRQLRQYKTLSLTPIQLERQYGFRRPGRGKPKLSPQERKQRRRRSRIPFREASEARLIRAISSPNQLEEVMVNFWFNHFN VSAKKGRTRLWVGAYEEEAIRPYVFGSFRDLLGATAKHPAMLFYLDNWQNTAPNSPGARGRFKGLNENYARELLELHTMG VKGGYSQADVVSAAKVLTGWGLPRGRQRLQAKQAFVFDARRHDNSRKTFLGQPIQGQGMAEGEELLDILATHPATAQHIS YKLAQYFVADTPPPALVDRLAQRFLATDGNIRSVLETLFESPEFREPRYYGQKFKTPYEYLISVARATGRPTVKPLLVAR ALRQFSMPLYECQPPNGYANTEAAWLNPDTTIRRISLATAFARGYGRQKTPVPPDQLEQTLGDRFSAQTKAVIDNSPRNL RAALMLGSPEMMYR
Specific function: Unknown
COG id: COG5267
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55895; Mature: 55763
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: PS00027 HOMEOBOX_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKFSDKILKISLSLMLAVGIWIGSTNGEPALATSMEADAVHVINRLSFGPSPGDLQHVK CCCHHHHHHHHHHHHHHHHHHHEECCCCCCCEECCCCHHHHHHHHHHCCCCCCCCHHHHH TVGIDDYIQEQLSPSQDSPRLKRQLRQYKTLSLTPIQLERQYGFRRPGRGKPKLSPQERK HCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEHHHHCCCCCCCCCCCCCCHHHHH QRRRRSRIPFREASEARLIRAISSPNQLEEVMVNFWFNHFNVSAKKGRTRLWVGAYEEEA HHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHC IRPYVFGSFRDLLGATAKHPAMLFYLDNWQNTAPNSPGARGRFKGLNENYARELLELHTM CCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH GVKGGYSQADVVSAAKVLTGWGLPRGRQRLQAKQAFVFDARRHDNSRKTFLGQPIQGQGM CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCC AEGEELLDILATHPATAQHISYKLAQYFVADTPPPALVDRLAQRFLATDGNIRSVLETLF CCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH ESPEFREPRYYGQKFKTPYEYLISVARATGRPTVKPLLVARALRQFSMPLYECQPPNGYA CCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCC NTEAAWLNPDTTIRRISLATAFARGYGRQKTPVPPDQLEQTLGDRFSAQTKAVIDNSPRN CCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCCC LRAALMLGSPEMMYR EEEEEEECCHHHHCC >Mature Secondary Structure AKFSDKILKISLSLMLAVGIWIGSTNGEPALATSMEADAVHVINRLSFGPSPGDLQHVK CCHHHHHHHHHHHHHHHHHHHEECCCCCCCEECCCCHHHHHHHHHHCCCCCCCCHHHHH TVGIDDYIQEQLSPSQDSPRLKRQLRQYKTLSLTPIQLERQYGFRRPGRGKPKLSPQERK HCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEHHHHCCCCCCCCCCCCCCHHHHH QRRRRSRIPFREASEARLIRAISSPNQLEEVMVNFWFNHFNVSAKKGRTRLWVGAYEEEA HHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHC IRPYVFGSFRDLLGATAKHPAMLFYLDNWQNTAPNSPGARGRFKGLNENYARELLELHTM CCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH GVKGGYSQADVVSAAKVLTGWGLPRGRQRLQAKQAFVFDARRHDNSRKTFLGQPIQGQGM CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCC AEGEELLDILATHPATAQHISYKLAQYFVADTPPPALVDRLAQRFLATDGNIRSVLETLF CCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH ESPEFREPRYYGQKFKTPYEYLISVARATGRPTVKPLLVARALRQFSMPLYECQPPNGYA CCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCC NTEAAWLNPDTTIRRISLATAFARGYGRQKTPVPPDQLEQTLGDRFSAQTKAVIDNSPRN CCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCCC LRAALMLGSPEMMYR EEEEEEECCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA