Definition Acaryochloris marina MBIC11017 chromosome, complete genome.
Accession NC_009925
Length 6,503,724

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The map label for this gene is 158338013

Identifier: 158338013

GI number: 158338013

Start: 4948415

End: 4948843

Strand: Reverse

Name: 158338013

Synonym: AM1_4900

Alternate gene names: NA

Gene position: 4948843-4948415 (Counterclockwise)

Preceding gene: 158338015

Following gene: 158338008

Centisome position: 76.09

GC content: 45.45

Gene sequence:

>429_bases
GTGATTCCATTAGCATGGGGCGTTAACACAATCCTGGGACTCGTCCTGAAACTGATTGTGACCGCTATTAGTCTCTTCAT
TATTTCCAAATTGCCATTTGTGGGGGTTGAGATTGATAGCCCCGGTAAGGCTGTCTTTTCTGCCTTTGTCTTCGGTATCT
TAAATGCTTTGGTCGTGCCATTGTTCGCTCTATTAGAGTTGGGGCCGAAGTTGACCGATATTGTGATTGCTGGCCCCATT
CATTTTGTTCTGAATATCATTATTTTCGCGCTGGCTGCAGCGTTGGTTCCTGGATTTAGCCTGAAAAATAAAATTTTAGA
TCCCATTGTGGGCTCCATCCTACTCACCATACTGAATACAGTGATTAACCACCTCCTCCCTTTTGGTGGAACGGCAAAAG
CCGCATTGGTGGTGGCTGGAATCGGTTAA

Upstream 100 bases:

>100_bases
CGGTAGTCACTAAGTGTGGAGTAATCCACGGGGGGACTTATTACGAGTGACTCTACTCTATTAGTCATCAACCAATACTC
TACCCGAGGAGGATAGACAA

Downstream 100 bases:

>100_bases
TCGTTCCGCTGGCGAGCCATTAGGTCTCAACGGATACCGGCTGAGCTGCTGTAGGTGGCCAGGTGGTTCGAGCCGCAATG
GGCATACGCCAACCTGTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MIPLAWGVNTILGLVLKLIVTAISLFIISKLPFVGVEIDSPGKAVFSAFVFGILNALVVPLFALLELGPKLTDIVIAGPI
HFVLNIIIFALAAALVPGFSLKNKILDPIVGSILLTILNTVINHLLPFGGTAKAALVVAGIG

Sequences:

>Translated_142_residues
MIPLAWGVNTILGLVLKLIVTAISLFIISKLPFVGVEIDSPGKAVFSAFVFGILNALVVPLFALLELGPKLTDIVIAGPI
HFVLNIIIFALAAALVPGFSLKNKILDPIVGSILLTILNTVINHLLPFGGTAKAALVVAGIG
>Mature_142_residues
MIPLAWGVNTILGLVLKLIVTAISLFIISKLPFVGVEIDSPGKAVFSAFVFGILNALVVPLFALLELGPKLTDIVIAGPI
HFVLNIIIFALAAALVPGFSLKNKILDPIVGSILLTILNTVINHLLPFGGTAKAALVVAGIG

Specific function: Unknown

COG id: COG1950

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14756; Mature: 14756

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: PS00307 LECTIN_LEGUME_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPLAWGVNTILGLVLKLIVTAISLFIISKLPFVGVEIDSPGKAVFSAFVFGILNALVVP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHH
LFALLELGPKLTDIVIAGPIHFVLNIIIFALAAALVPGFSLKNKILDPIVGSILLTILNT
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
VINHLLPFGGTAKAALVVAGIG
HHHHHCCCCCCCHHHHHEECCC
>Mature Secondary Structure
MIPLAWGVNTILGLVLKLIVTAISLFIISKLPFVGVEIDSPGKAVFSAFVFGILNALVVP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHH
LFALLELGPKLTDIVIAGPIHFVLNIIIFALAAALVPGFSLKNKILDPIVGSILLTILNT
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
VINHLLPFGGTAKAALVVAGIG
HHHHHCCCCCCCHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA