| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158338013
Identifier: 158338013
GI number: 158338013
Start: 4948415
End: 4948843
Strand: Reverse
Name: 158338013
Synonym: AM1_4900
Alternate gene names: NA
Gene position: 4948843-4948415 (Counterclockwise)
Preceding gene: 158338015
Following gene: 158338008
Centisome position: 76.09
GC content: 45.45
Gene sequence:
>429_bases GTGATTCCATTAGCATGGGGCGTTAACACAATCCTGGGACTCGTCCTGAAACTGATTGTGACCGCTATTAGTCTCTTCAT TATTTCCAAATTGCCATTTGTGGGGGTTGAGATTGATAGCCCCGGTAAGGCTGTCTTTTCTGCCTTTGTCTTCGGTATCT TAAATGCTTTGGTCGTGCCATTGTTCGCTCTATTAGAGTTGGGGCCGAAGTTGACCGATATTGTGATTGCTGGCCCCATT CATTTTGTTCTGAATATCATTATTTTCGCGCTGGCTGCAGCGTTGGTTCCTGGATTTAGCCTGAAAAATAAAATTTTAGA TCCCATTGTGGGCTCCATCCTACTCACCATACTGAATACAGTGATTAACCACCTCCTCCCTTTTGGTGGAACGGCAAAAG CCGCATTGGTGGTGGCTGGAATCGGTTAA
Upstream 100 bases:
>100_bases CGGTAGTCACTAAGTGTGGAGTAATCCACGGGGGGACTTATTACGAGTGACTCTACTCTATTAGTCATCAACCAATACTC TACCCGAGGAGGATAGACAA
Downstream 100 bases:
>100_bases TCGTTCCGCTGGCGAGCCATTAGGTCTCAACGGATACCGGCTGAGCTGCTGTAGGTGGCCAGGTGGTTCGAGCCGCAATG GGCATACGCCAACCTGTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MIPLAWGVNTILGLVLKLIVTAISLFIISKLPFVGVEIDSPGKAVFSAFVFGILNALVVPLFALLELGPKLTDIVIAGPI HFVLNIIIFALAAALVPGFSLKNKILDPIVGSILLTILNTVINHLLPFGGTAKAALVVAGIG
Sequences:
>Translated_142_residues MIPLAWGVNTILGLVLKLIVTAISLFIISKLPFVGVEIDSPGKAVFSAFVFGILNALVVPLFALLELGPKLTDIVIAGPI HFVLNIIIFALAAALVPGFSLKNKILDPIVGSILLTILNTVINHLLPFGGTAKAALVVAGIG >Mature_142_residues MIPLAWGVNTILGLVLKLIVTAISLFIISKLPFVGVEIDSPGKAVFSAFVFGILNALVVPLFALLELGPKLTDIVIAGPI HFVLNIIIFALAAALVPGFSLKNKILDPIVGSILLTILNTVINHLLPFGGTAKAALVVAGIG
Specific function: Unknown
COG id: COG1950
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14756; Mature: 14756
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: PS00307 LECTIN_LEGUME_BETA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPLAWGVNTILGLVLKLIVTAISLFIISKLPFVGVEIDSPGKAVFSAFVFGILNALVVP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHH LFALLELGPKLTDIVIAGPIHFVLNIIIFALAAALVPGFSLKNKILDPIVGSILLTILNT HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH VINHLLPFGGTAKAALVVAGIG HHHHHCCCCCCCHHHHHEECCC >Mature Secondary Structure MIPLAWGVNTILGLVLKLIVTAISLFIISKLPFVGVEIDSPGKAVFSAFVFGILNALVVP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHH LFALLELGPKLTDIVIAGPIHFVLNIIIFALAAALVPGFSLKNKILDPIVGSILLTILNT HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH VINHLLPFGGTAKAALVVAGIG HHHHHCCCCCCCHHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA