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The map label for this gene is 158338001

Identifier: 158338001

GI number: 158338001

Start: 4937664

End: 4938248

Strand: Reverse

Name: 158338001

Synonym: AM1_4888

Alternate gene names: NA

Gene position: 4938248-4937664 (Counterclockwise)

Preceding gene: 158338002

Following gene: 158338000

Centisome position: 75.93

GC content: 51.79

Gene sequence:

>585_bases
ATGATTGCCAAGGCAGAGTTACTGGCTGCGATCGCAGGTACAAATCGAGGCGTGATCACCACCGAAGCCAATCGTAGCCT
AGTGCTGGATAAAGTCGTTCAGCTCGAAGTTCAAAATCCCACCCCCAAGCCCTTAAATGAACGAGACCGCCTCAGTGGGG
TTTGGCGGTTAATTTATACCACGAGCCCTGACCTGTTGGGCTTGGCGCGTTTGCCCGTGGTGCCTGCCGGGCCCATTCAT
CAATGCATTAGAGGACAAGAGCTGAAGCTCTATAACGTTTTGGAGCTACAGGGTATCCCATTCTTAGAAGGAGTGTTGTG
TGTGGCAGCTCGGCTGACCCCCGTATCGGAGCGACGAGTCCAAGTCAATTTTGAGCGGACTATTGTGGGGGTGAAGGGGC
TCATGAATTATCCCTCCCTGGATACCCTGATTTCTCGATTGGAAACCCAGAGTCCAGTTGCAGCCCTCTCTGTTCCCTTA
GATACCGATCGTTCGGCGGGTTGGCTAGAAACCACCTATCTAGATGAGGACTTACGCATTGGTCGAGGCAATAATGATAG
CCTCTTTGTGTTGACAAGAGTCTAA

Upstream 100 bases:

>100_bases
CACAACTGGTCCAACAGCGCTCTCGTGAGGTTGGTTACAATGACGGGGAGCGATATGTTGGGAATGGATGATTATCGTGT
TGATACTGGGGAGCTGAGAC

Downstream 100 bases:

>100_bases
AGGTTGAGGATGGCCCGACCCACGTTATATGCAGCGATCACGAATCATGGCTTCGGTCATGCCACTCGTACTGCAGCGGT
CTTAGCAGAAATTCAGCGGT

Product: PAP fibrillin

Products: NA

Alternate protein names: Fibrillin; PAP Fibrillin; PAP/Fibrillin Family; PAP_fibrillin; PAP/Fibrillin Family Protein

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MIAKAELLAAIAGTNRGVITTEANRSLVLDKVVQLEVQNPTPKPLNERDRLSGVWRLIYTTSPDLLGLARLPVVPAGPIH
QCIRGQELKLYNVLELQGIPFLEGVLCVAARLTPVSERRVQVNFERTIVGVKGLMNYPSLDTLISRLETQSPVAALSVPL
DTDRSAGWLETTYLDEDLRIGRGNNDSLFVLTRV

Sequences:

>Translated_194_residues
MIAKAELLAAIAGTNRGVITTEANRSLVLDKVVQLEVQNPTPKPLNERDRLSGVWRLIYTTSPDLLGLARLPVVPAGPIH
QCIRGQELKLYNVLELQGIPFLEGVLCVAARLTPVSERRVQVNFERTIVGVKGLMNYPSLDTLISRLETQSPVAALSVPL
DTDRSAGWLETTYLDEDLRIGRGNNDSLFVLTRV
>Mature_194_residues
MIAKAELLAAIAGTNRGVITTEANRSLVLDKVVQLEVQNPTPKPLNERDRLSGVWRLIYTTSPDLLGLARLPVVPAGPIH
QCIRGQELKLYNVLELQGIPFLEGVLCVAARLTPVSERRVQVNFERTIVGVKGLMNYPSLDTLISRLETQSPVAALSVPL
DTDRSAGWLETTYLDEDLRIGRGNNDSLFVLTRV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21366; Mature: 21366

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAKAELLAAIAGTNRGVITTEANRSLVLDKVVQLEVQNPTPKPLNERDRLSGVWRLIYT
CCCHHHHHHHHHCCCCCEEEECCCCEEEEEEEEEEEECCCCCCCCCHHHHHHHEEEEEEE
TSPDLLGLARLPVVPAGPIHQCIRGQELKLYNVLELQGIPFLEGVLCVAARLTPVSERRV
CCCCCEEHHHCCCCCCCHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCEE
QVNFERTIVGVKGLMNYPSLDTLISRLETQSPVAALSVPLDTDRSAGWLETTYLDEDLRI
EEEEHHEEEEHHHHCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEEECCCCEE
GRGNNDSLFVLTRV
CCCCCCCEEEEEEC
>Mature Secondary Structure
MIAKAELLAAIAGTNRGVITTEANRSLVLDKVVQLEVQNPTPKPLNERDRLSGVWRLIYT
CCCHHHHHHHHHCCCCCEEEECCCCEEEEEEEEEEEECCCCCCCCCHHHHHHHEEEEEEE
TSPDLLGLARLPVVPAGPIHQCIRGQELKLYNVLELQGIPFLEGVLCVAARLTPVSERRV
CCCCCEEHHHCCCCCCCHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCEE
QVNFERTIVGVKGLMNYPSLDTLISRLETQSPVAALSVPLDTDRSAGWLETTYLDEDLRI
EEEEHHEEEEHHHHCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEEECCCCEE
GRGNNDSLFVLTRV
CCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA