| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
Click here to switch to the map view.
The map label for this gene is 158337980
Identifier: 158337980
GI number: 158337980
Start: 4918585
End: 4920591
Strand: Reverse
Name: 158337980
Synonym: AM1_4867
Alternate gene names: NA
Gene position: 4920591-4918585 (Counterclockwise)
Preceding gene: 158337981
Following gene: 158337979
Centisome position: 75.66
GC content: 49.68
Gene sequence:
>2007_bases ATGTTTTCCGTGTTGGCAACGCTATGCTTAGGCTGTCAAACTGACCTCAATACTCCAAAGGCTCAGGAGTTATCCTCGCC TGTGATTCAACAGCCGATGTTAGTTGCAGGCCCCTATGAGTTGAATCCCGGCTTGCTCCAGCCTATTGTTCAACCTGACC GTTCTCAGAAAAAGCCTGCACGTCCCCAGGCTTCTCCCCAACCTTTCCCCTCCTCACCAGCCATTACCCCGACCAGCCCA TCTGGAGCAGGCCCCCAAGGCGGAGCTTCATTTCCAACTGATGTGAATATTCCAGCAGAGGCGGATGGAGTTCCGCTAGT GGAGAATTCTCAGCCATATTCTCCGTCCCCAGTTCCACCTAATTCACCCTTACTAATTATTAGTCCAGCGGCCCGTCCTT CAGGTCCAGCTCCTCGGCCAATAGCCTCACCACTGCCCCCATCAGATAATTTTCACGGAGGTGCGGAAACCCCTAGACCT CCTACCAATAGTCCAGCAGCTCGTCCTTCAGGTCCAGCTCTTCGGCCAACCCATATTCCTCTTCGCTCCTCACCCGATGA TTTTCAAGGCGGTGCAGCAACACCAGCCCATAGTCCGGCGGCCCGACCTTCAGGTCCAGCTCCGCGACCAACAGATCTCC CAAAGCATCCCTCACTCCCAGGTTCTTTTGAGGGAGGGGCGGTAACTCCCGTTGATAGTGCCCCTATCCATAGTCCAACG GTCCGTCCTTCAGGTCCCGTTCCTCGAAACATACCCTCTGCTACTTCTCCCAAGGATTCTGCGACAGGGGGTGCGACAAC GCCTGCTCATCAAGCACCTCATTCTAGCCCTGCTGTCCGTCCATCAGGTCTGCCCCCAACGCGGCAACAAAGGTCCCAAC CGACTGTTCCAGAAGCTTTTCGGGACAGCTCGCCCCCTTCATCTACCCCTCGTTTTCGATCTCTACCTTCACCCGCCCGG CAGCAAAATATTTCACCTACCTCTCAGCCTGTGCTAGTGCAAGGCACACCTAAGGTTCCTGCACAAACGACCGCTCAATC GCCTACGGTACCTCCAGACCTCCCTCTTCAACCGCCTCAAAAAACACCTCCAGATCGGTTCCCTACTGAATTAACCCCGA TTGGAGCCGCTGATGATCCACAGGTGTCTTTTATTGTCTTAGAGAGTTCGACAACTGACTTCAAGCTAGATTTCGATGAG TTTGGCAAAGAAAACTTAAAAATCGAAGAAATTATAACTTTTCGAGTTCGGAATGGAGATGTTGTCACCTTTACAACAGG GGTCAACACCTATAGCCAGGAAGGGCAAGAACCCGTCAAAAATATTCCGCTGATTTTAGGATGGGAGACTGAAGTTGGAG AGGTTTCCATCAATGTAGCGGCGGGTGCTGAAGTATTTAATCGTTTAGATCCTCAGCCTACATTTAAGGTGGGAGCGAAA ACATCCCTTTTTGGACAAGTCTTGGTTTCTGGAGAAGTCGAGCATGGTCCTTATAAATTCAACACCACGACTTTAGAGAA TGAAATTAGCTATTGGCGGATTCGTCCAAGCGTATTTTGGCAAATTGATAGTAAAACCACCTTCTTTGGGCTGTTCCAAG CTGGATTTTTCAATGATGGCAACCAAGAAATCCAGTCTTTCAGCCGATTAGAACGAAAAATCGGACCTTTTTCTGTCGCT GCAAACGTATTCACCTGGAACTTTGCGGAAGATCTAGAATCAGAGAGTGGCTATTTTTCTCCCCTCAGTTTTTTACTCTA CAACGCTGAAGTGGGTTGGAAAGGCAAAATTTTTGACCCCTTAACCTGCCAATTTGCTGCCTCTATTGGCAACCAAGTCG TGAATGGGGGCAAAAGTACCGGTCGAGGATTACAAGCGAAATGTACAGCGTCTTTGGCCGATAATGTAGAGCTTGATTTT GGTTATGTTCTCACCAACATCATTTCAAGTGGATCTGGGGCCAGTAATAGCCATATCTTTTCTGGGCAGTTGAGAATCGA TTTTTAA
Upstream 100 bases:
>100_bases TACAGGGCACTCTAAGCTGGGGCAGATTGATTTTTCTCAGAAAATGTCGATTTTTTAGCTGAATTCCCCTTATGACCTGT TCTGTGGTAGATCATCTCTC
Downstream 100 bases:
>100_bases TTTTTTAAGAGTGTTAAACCTATTGTAAAGTTGGGAATTCTAGAGCAGACAAGCCTCTTTTAACGGAAGAAAGTTCATTT TAATCGATTATTATTGATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 668; Mature: 668
Protein sequence:
>668_residues MFSVLATLCLGCQTDLNTPKAQELSSPVIQQPMLVAGPYELNPGLLQPIVQPDRSQKKPARPQASPQPFPSSPAITPTSP SGAGPQGGASFPTDVNIPAEADGVPLVENSQPYSPSPVPPNSPLLIISPAARPSGPAPRPIASPLPPSDNFHGGAETPRP PTNSPAARPSGPALRPTHIPLRSSPDDFQGGAATPAHSPAARPSGPAPRPTDLPKHPSLPGSFEGGAVTPVDSAPIHSPT VRPSGPVPRNIPSATSPKDSATGGATTPAHQAPHSSPAVRPSGLPPTRQQRSQPTVPEAFRDSSPPSSTPRFRSLPSPAR QQNISPTSQPVLVQGTPKVPAQTTAQSPTVPPDLPLQPPQKTPPDRFPTELTPIGAADDPQVSFIVLESSTTDFKLDFDE FGKENLKIEEIITFRVRNGDVVTFTTGVNTYSQEGQEPVKNIPLILGWETEVGEVSINVAAGAEVFNRLDPQPTFKVGAK TSLFGQVLVSGEVEHGPYKFNTTTLENEISYWRIRPSVFWQIDSKTTFFGLFQAGFFNDGNQEIQSFSRLERKIGPFSVA ANVFTWNFAEDLESESGYFSPLSFLLYNAEVGWKGKIFDPLTCQFAASIGNQVVNGGKSTGRGLQAKCTASLADNVELDF GYVLTNIISSGSGASNSHIFSGQLRIDF
Sequences:
>Translated_668_residues MFSVLATLCLGCQTDLNTPKAQELSSPVIQQPMLVAGPYELNPGLLQPIVQPDRSQKKPARPQASPQPFPSSPAITPTSP SGAGPQGGASFPTDVNIPAEADGVPLVENSQPYSPSPVPPNSPLLIISPAARPSGPAPRPIASPLPPSDNFHGGAETPRP PTNSPAARPSGPALRPTHIPLRSSPDDFQGGAATPAHSPAARPSGPAPRPTDLPKHPSLPGSFEGGAVTPVDSAPIHSPT VRPSGPVPRNIPSATSPKDSATGGATTPAHQAPHSSPAVRPSGLPPTRQQRSQPTVPEAFRDSSPPSSTPRFRSLPSPAR QQNISPTSQPVLVQGTPKVPAQTTAQSPTVPPDLPLQPPQKTPPDRFPTELTPIGAADDPQVSFIVLESSTTDFKLDFDE FGKENLKIEEIITFRVRNGDVVTFTTGVNTYSQEGQEPVKNIPLILGWETEVGEVSINVAAGAEVFNRLDPQPTFKVGAK TSLFGQVLVSGEVEHGPYKFNTTTLENEISYWRIRPSVFWQIDSKTTFFGLFQAGFFNDGNQEIQSFSRLERKIGPFSVA ANVFTWNFAEDLESESGYFSPLSFLLYNAEVGWKGKIFDPLTCQFAASIGNQVVNGGKSTGRGLQAKCTASLADNVELDF GYVLTNIISSGSGASNSHIFSGQLRIDF >Mature_668_residues MFSVLATLCLGCQTDLNTPKAQELSSPVIQQPMLVAGPYELNPGLLQPIVQPDRSQKKPARPQASPQPFPSSPAITPTSP SGAGPQGGASFPTDVNIPAEADGVPLVENSQPYSPSPVPPNSPLLIISPAARPSGPAPRPIASPLPPSDNFHGGAETPRP PTNSPAARPSGPALRPTHIPLRSSPDDFQGGAATPAHSPAARPSGPAPRPTDLPKHPSLPGSFEGGAVTPVDSAPIHSPT VRPSGPVPRNIPSATSPKDSATGGATTPAHQAPHSSPAVRPSGLPPTRQQRSQPTVPEAFRDSSPPSSTPRFRSLPSPAR QQNISPTSQPVLVQGTPKVPAQTTAQSPTVPPDLPLQPPQKTPPDRFPTELTPIGAADDPQVSFIVLESSTTDFKLDFDE FGKENLKIEEIITFRVRNGDVVTFTTGVNTYSQEGQEPVKNIPLILGWETEVGEVSINVAAGAEVFNRLDPQPTFKVGAK TSLFGQVLVSGEVEHGPYKFNTTTLENEISYWRIRPSVFWQIDSKTTFFGLFQAGFFNDGNQEIQSFSRLERKIGPFSVA ANVFTWNFAEDLESESGYFSPLSFLLYNAEVGWKGKIFDPLTCQFAASIGNQVVNGGKSTGRGLQAKCTASLADNVELDF GYVLTNIISSGSGASNSHIFSGQLRIDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70832; Mature: 70832
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSVLATLCLGCQTDLNTPKAQELSSPVIQQPMLVAGPYELNPGLLQPIVQPDRSQKKPA CHHHHHHHHHCCCCCCCCCCHHHHCCHHHHCCEEEECCCCCCCHHHHHHCCCCCCCCCCC RPQASPQPFPSSPAITPTSPSGAGPQGGASFPTDVNIPAEADGVPLVENSQPYSPSPVPP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCC NSPLLIISPAARPSGPAPRPIASPLPPSDNFHGGAETPRPPTNSPAARPSGPALRPTHIP CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC LRSSPDDFQGGAATPAHSPAARPSGPAPRPTDLPKHPSLPGSFEGGAVTPVDSAPIHSPT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCC VRPSGPVPRNIPSATSPKDSATGGATTPAHQAPHSSPAVRPSGLPPTRQQRSQPTVPEAF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHH RDSSPPSSTPRFRSLPSPARQQNISPTSQPVLVQGTPKVPAQTTAQSPTVPPDLPLQPPQ CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC KTPPDRFPTELTPIGAADDPQVSFIVLESSTTDFKLDFDEFGKENLKIEEIITFRVRNGD CCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEECHHHHCCCCCEEEEEEEEEECCCC VVTFTTGVNTYSQEGQEPVKNIPLILGWETEVGEVSINVAAGAEVFNRLDPQPTFKVGAK EEEEECCCCCHHHCCCCHHHHCCEEEECCCCCCEEEEEEEHHHHHHHHCCCCCCEECCCC TSLFGQVLVSGEVEHGPYKFNTTTLENEISYWRIRPSVFWQIDSKTTFFGLFQAGFFNDG HHHEEEEEEECCCCCCCEEEECEEECCCCEEEEECCEEEEEECCCCEEEEEHHHCCCCCC NQEIQSFSRLERKIGPFSVAANVFTWNFAEDLESESGYFSPLSFLLYNAEVGWKGKIFDP HHHHHHHHHHHHHCCCEEEEEEEEEECHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCC LTCQFAASIGNQVVNGGKSTGRGLQAKCTASLADNVELDFGYVLTNIISSGSGASNSHIF HHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHCCCEEHHHHHHHHHHHCCCCCCCCEEE SGQLRIDF EEEEEECC >Mature Secondary Structure MFSVLATLCLGCQTDLNTPKAQELSSPVIQQPMLVAGPYELNPGLLQPIVQPDRSQKKPA CHHHHHHHHHCCCCCCCCCCHHHHCCHHHHCCEEEECCCCCCCHHHHHHCCCCCCCCCCC RPQASPQPFPSSPAITPTSPSGAGPQGGASFPTDVNIPAEADGVPLVENSQPYSPSPVPP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCC NSPLLIISPAARPSGPAPRPIASPLPPSDNFHGGAETPRPPTNSPAARPSGPALRPTHIP CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC LRSSPDDFQGGAATPAHSPAARPSGPAPRPTDLPKHPSLPGSFEGGAVTPVDSAPIHSPT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCC VRPSGPVPRNIPSATSPKDSATGGATTPAHQAPHSSPAVRPSGLPPTRQQRSQPTVPEAF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHH RDSSPPSSTPRFRSLPSPARQQNISPTSQPVLVQGTPKVPAQTTAQSPTVPPDLPLQPPQ CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC KTPPDRFPTELTPIGAADDPQVSFIVLESSTTDFKLDFDEFGKENLKIEEIITFRVRNGD CCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEECHHHHCCCCCEEEEEEEEEECCCC VVTFTTGVNTYSQEGQEPVKNIPLILGWETEVGEVSINVAAGAEVFNRLDPQPTFKVGAK EEEEECCCCCHHHCCCCHHHHCCEEEECCCCCCEEEEEEEHHHHHHHHCCCCCCEECCCC TSLFGQVLVSGEVEHGPYKFNTTTLENEISYWRIRPSVFWQIDSKTTFFGLFQAGFFNDG HHHEEEEEEECCCCCCCEEEECEEECCCCEEEEECCEEEEEECCCCEEEEEHHHCCCCCC NQEIQSFSRLERKIGPFSVAANVFTWNFAEDLESESGYFSPLSFLLYNAEVGWKGKIFDP HHHHHHHHHHHHHCCCEEEEEEEEEECHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCC LTCQFAASIGNQVVNGGKSTGRGLQAKCTASLADNVELDFGYVLTNIISSGSGASNSHIF HHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHCCCEEHHHHHHHHHHHCCCCCCCCEEE SGQLRIDF EEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA