| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is folD
Identifier: 158337969
GI number: 158337969
Start: 4899840
End: 4900727
Strand: Reverse
Name: folD
Synonym: AM1_4855
Alternate gene names: 158337969
Gene position: 4900727-4899840 (Counterclockwise)
Preceding gene: 158337971
Following gene: 158337967
Centisome position: 75.35
GC content: 52.03
Gene sequence:
>888_bases ATGCCTGTTGAGTCTTCCAAGCTGCTAGACGGCAAGGGACTAGCCCAAAAAATTCAAGGGGAGCTGACTGCCCAAATTCA AACCTTACAAGCCGAAATCGGTCGTCCACCCGGATTAGCCGTTCTGATGGTGGGGGATAATCCGGCGAGTGCAGCCTATG TGCGGAATAAAGAACGGGCCTGCGAACGGTTAGGGATTGCTTCTTTTGGTCACCATTTCCCTGCGGAGGTGACCTTTGAG GAAGTGAAGCAAACCATCCACGACTTAAATGCGAATCCTCAAGTCGATGGCATTCTGGTGCAGTTGCCCTTGCCTGCCCA TTTGGATTCCACAGCACTACTGTATGAGATTGATCCAGATAAAGATGTAGATGGTTTACATCCCCTAAACTTAGGGCGAT TAGTGCGAGGTGAGGCAGGATTACGCAGCTGTACCCCTGCGGGGGTGATGCGTTTATTAGCAGCCTATGATGTGGAGCTG TCCGGTCTGCATGCGGTTGTTATTGGCCGCAGTATTTTGGTAGGCAAACCCGTGTCTTTGATGCTGTTGGCAGCCAATGC CACGGTGACGATGGCCCATTCTCGCACCCCTGATTTGGCCGCGGTTACCCGCACTGCTGATGTGTTGGTGGCGGCCGTCG GCAAACCTGGACTGATCACGGCAGATATGGTTAAGCCCGGAGCTGTGGTGATTGATGTGGGGATAAGCCGCCAAGAAATT GAAGGGAAAGCCCGCTTAGTAGGAGACGTGGAGTTTACCTCAGTCCAGTCTCAAAGTTCATTAATTACCCCAGTGCCAGG GGGCGTCGGTCCCATAACCGTGTCTATGCTTTTGGAGAATACCGTGTGGAGTTTTAGGCAACGGCACAAAGGATCATACA ATAGTTGA
Upstream 100 bases:
>100_bases AAACTGTAACGTTGCCCCTTAGGTATAAGACTATCCCGAATTCTAAGGTAAGCCGATACAATCGAGAAGCACTTTTAACT GCATCAGAAGGACGTTACCG
Downstream 100 bases:
>100_bases ACTAGCCTCATGGTTGAGATCGCACTGAATCACTGCTTTCAACAGCTGGAGGGCTTTTTTTGCCCGACTTAGGGTGACCA TTTCATCGTCAAAGATCACG
Product: bifunctional protein FolD
Products: NA
Alternate protein names: Methylenetetrahydrofolate dehydrogenase; Methenyltetrahydrofolate cyclohydrolase
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MPVESSKLLDGKGLAQKIQGELTAQIQTLQAEIGRPPGLAVLMVGDNPASAAYVRNKERACERLGIASFGHHFPAEVTFE EVKQTIHDLNANPQVDGILVQLPLPAHLDSTALLYEIDPDKDVDGLHPLNLGRLVRGEAGLRSCTPAGVMRLLAAYDVEL SGLHAVVIGRSILVGKPVSLMLLAANATVTMAHSRTPDLAAVTRTADVLVAAVGKPGLITADMVKPGAVVIDVGISRQEI EGKARLVGDVEFTSVQSQSSLITPVPGGVGPITVSMLLENTVWSFRQRHKGSYNS
Sequences:
>Translated_295_residues MPVESSKLLDGKGLAQKIQGELTAQIQTLQAEIGRPPGLAVLMVGDNPASAAYVRNKERACERLGIASFGHHFPAEVTFE EVKQTIHDLNANPQVDGILVQLPLPAHLDSTALLYEIDPDKDVDGLHPLNLGRLVRGEAGLRSCTPAGVMRLLAAYDVEL SGLHAVVIGRSILVGKPVSLMLLAANATVTMAHSRTPDLAAVTRTADVLVAAVGKPGLITADMVKPGAVVIDVGISRQEI EGKARLVGDVEFTSVQSQSSLITPVPGGVGPITVSMLLENTVWSFRQRHKGSYNS >Mature_294_residues PVESSKLLDGKGLAQKIQGELTAQIQTLQAEIGRPPGLAVLMVGDNPASAAYVRNKERACERLGIASFGHHFPAEVTFEE VKQTIHDLNANPQVDGILVQLPLPAHLDSTALLYEIDPDKDVDGLHPLNLGRLVRGEAGLRSCTPAGVMRLLAAYDVELS GLHAVVIGRSILVGKPVSLMLLAANATVTMAHSRTPDLAAVTRTADVLVAAVGKPGLITADMVKPGAVVIDVGISRQEIE GKARLVGDVEFTSVQSQSSLITPVPGGVGPITVSMLLENTVWSFRQRHKGSYNS
Specific function: Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
COG id: COG0190
COG function: function code H; 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family
Homologues:
Organism=Homo sapiens, GI222418558, Length=292, Percent_Identity=42.8082191780822, Blast_Score=221, Evalue=5e-58, Organism=Homo sapiens, GI94721354, Length=292, Percent_Identity=42.1232876712329, Blast_Score=217, Evalue=9e-57, Organism=Homo sapiens, GI222136639, Length=290, Percent_Identity=39.6551724137931, Blast_Score=204, Evalue=6e-53, Organism=Escherichia coli, GI1786741, Length=285, Percent_Identity=47.719298245614, Blast_Score=266, Evalue=1e-72, Organism=Caenorhabditis elegans, GI17568735, Length=264, Percent_Identity=37.8787878787879, Blast_Score=179, Evalue=2e-45, Organism=Saccharomyces cerevisiae, GI6319558, Length=287, Percent_Identity=42.8571428571429, Blast_Score=225, Evalue=6e-60, Organism=Saccharomyces cerevisiae, GI6321643, Length=302, Percent_Identity=40.0662251655629, Blast_Score=217, Evalue=1e-57, Organism=Drosophila melanogaster, GI17136818, Length=302, Percent_Identity=45.364238410596, Blast_Score=247, Evalue=7e-66, Organism=Drosophila melanogaster, GI17136816, Length=302, Percent_Identity=45.364238410596, Blast_Score=247, Evalue=8e-66, Organism=Drosophila melanogaster, GI62472483, Length=286, Percent_Identity=41.2587412587413, Blast_Score=211, Evalue=5e-55, Organism=Drosophila melanogaster, GI45551871, Length=286, Percent_Identity=41.2587412587413, Blast_Score=211, Evalue=5e-55, Organism=Drosophila melanogaster, GI24645718, Length=286, Percent_Identity=41.2587412587413, Blast_Score=211, Evalue=6e-55, Organism=Drosophila melanogaster, GI17137370, Length=286, Percent_Identity=41.2587412587413, Blast_Score=211, Evalue=6e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FOLD_ACAM1 (B0C3J3)
Other databases:
- EMBL: CP000828 - RefSeq: YP_001519145.1 - ProteinModelPortal: B0C3J3 - SMR: B0C3J3 - GeneID: 5683656 - GenomeReviews: CP000828_GR - KEGG: amr:AM1_4855 - HOGENOM: HBG328751 - OMA: GIDNTKV - BioCyc: AMAR329726:AM1_4855-MONOMER - GO: GO:0005488 - HAMAP: MF_01576 - InterPro: IPR016040 - InterPro: IPR000672 - InterPro: IPR020630 - InterPro: IPR020867 - InterPro: IPR020631 - Gene3D: G3DSA:3.40.50.720 - PRINTS: PR00085
Pfam domain/function: PF00763 THF_DHG_CYH; PF02882 THF_DHG_CYH_C
EC number: =1.5.1.5; =3.5.4.9
Molecular weight: Translated: 31204; Mature: 31073
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00766 THF_DHG_CYH_1; PS00767 THF_DHG_CYH_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVESSKLLDGKGLAQKIQGELTAQIQTLQAEIGRPPGLAVLMVGDNPASAAYVRNKERA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHCHHHH CERLGIASFGHHFPAEVTFEEVKQTIHDLNANPQVDGILVQLPLPAHLDSTALLYEIDPD HHHCCHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEEEECCC KDVDGLHPLNLGRLVRGEAGLRSCTPAGVMRLLAAYDVELSGLHAVVIGRSILVGKPVSL CCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCEEEECCCCEE MLLAANATVTMAHSRTPDLAAVTRTADVLVAAVGKPGLITADMVKPGAVVIDVGISRQEI EEEECCCEEEEEECCCCCHHHHHHHHHEEEEECCCCCEEECCCCCCCEEEEEECCCHHHC EGKARLVGDVEFTSVQSQSSLITPVPGGVGPITVSMLLENTVWSFRQRHKGSYNS CCCEEEEECEEEEEECCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PVESSKLLDGKGLAQKIQGELTAQIQTLQAEIGRPPGLAVLMVGDNPASAAYVRNKERA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHCHHHH CERLGIASFGHHFPAEVTFEEVKQTIHDLNANPQVDGILVQLPLPAHLDSTALLYEIDPD HHHCCHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEEEECCC KDVDGLHPLNLGRLVRGEAGLRSCTPAGVMRLLAAYDVELSGLHAVVIGRSILVGKPVSL CCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCEEEECCCCEE MLLAANATVTMAHSRTPDLAAVTRTADVLVAAVGKPGLITADMVKPGAVVIDVGISRQEI EEEECCCEEEEEECCCCCHHHHHHHHHEEEEECCCCCEEECCCCCCCEEEEEECCCHHHC EGKARLVGDVEFTSVQSQSSLITPVPGGVGPITVSMLLENTVWSFRQRHKGSYNS CCCEEEEECEEEEEECCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA