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The map label for this gene is ywjB [H]

Identifier: 158337961

GI number: 158337961

Start: 4890040

End: 4890582

Strand: Direct

Name: ywjB [H]

Synonym: AM1_4848

Alternate gene names: 158337961

Gene position: 4890040-4890582 (Clockwise)

Preceding gene: 158337959

Following gene: 158337962

Centisome position: 75.19

GC content: 48.43

Gene sequence:

>543_bases
ATGAGCACAAAAGTTTCTGTTTTTATTGCGACCAGCTTAGATGGATTTATCGCCAGAACCAATGGAGACATCGATTGGCT
CAATGAGGCGAATGCAGCAGTCCCGGAGGGGGAAGATTGTGGCTATCAAGCCTTTATGGCCTCGGTGGATGTCTTGGTCA
TGGGGCGAAAAACCTATGAACAGGTTCTATCTTTTGGAGCGTGGCCCTATGGTCAAACCCGAGTCATTGTCTTGAGTCGA
ACTCCTATCCAATTCCCAGATGCTTTGCCTGCCTGCATTACGCACTCTGCAGACCCCCCACTCATGCTCTATAACCGCCT
TGTCCAAGAAGGAGCCCAGCATTTATATATAGATGGTGGGGCTACAATCCAGCGATTTTTGGCGGCGGGTCTGATTGATG
AACTCACCATTACCGTGATCCCTATTCTGTTAGGCGAGGGGATACCTCTGTTCGGTTCCTTGGCAAAAGAGATACCGCTG
ACCCACCTCAGCTCCTATTCCTATGACTTTGGATTTGTCCAACTTAAATATGCTGTTTCTTGA

Upstream 100 bases:

>100_bases
TCTTCCACCGTTTTATAACACTAAATTACCTATTTACTTTACTGAAAAAGTAATTAAGAACTCTGGGTAAAGTCAAAATT
TAGCAGGTCATGCGTCACCT

Downstream 100 bases:

>100_bases
AATAGGCTCTCAGCTTTCGCAGATGCATGGACAGCATGGTGGTGCAATCTCAGATCTGTATTGCGGTAAGATCTCTCAGA
TGATCCCATCCTCATCACTG

Product: riboflavin biosynthesis protein RibD domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MSTKVSVFIATSLDGFIARTNGDIDWLNEANAAVPEGEDCGYQAFMASVDVLVMGRKTYEQVLSFGAWPYGQTRVIVLSR
TPIQFPDALPACITHSADPPLMLYNRLVQEGAQHLYIDGGATIQRFLAAGLIDELTITVIPILLGEGIPLFGSLAKEIPL
THLSSYSYDFGFVQLKYAVS

Sequences:

>Translated_180_residues
MSTKVSVFIATSLDGFIARTNGDIDWLNEANAAVPEGEDCGYQAFMASVDVLVMGRKTYEQVLSFGAWPYGQTRVIVLSR
TPIQFPDALPACITHSADPPLMLYNRLVQEGAQHLYIDGGATIQRFLAAGLIDELTITVIPILLGEGIPLFGSLAKEIPL
THLSSYSYDFGFVQLKYAVS
>Mature_179_residues
STKVSVFIATSLDGFIARTNGDIDWLNEANAAVPEGEDCGYQAFMASVDVLVMGRKTYEQVLSFGAWPYGQTRVIVLSRT
PIQFPDALPACITHSADPPLMLYNRLVQEGAQHLYIDGGATIQRFLAAGLIDELTITVIPILLGEGIPLFGSLAKEIPLT
HLSSYSYDFGFVQLKYAVS

Specific function: Unknown

COG id: COG0262

COG function: function code H; Dihydrofolate reductase

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yyaP [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002734 [H]

Pfam domain/function: PF01872 RibD_C [H]

EC number: NA

Molecular weight: Translated: 19607; Mature: 19476

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTKVSVFIATSLDGFIARTNGDIDWLNEANAAVPEGEDCGYQAFMASVDVLVMGRKTYE
CCCEEEEEEEECCCCEEEECCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHEEECHHHHH
QVLSFGAWPYGQTRVIVLSRTPIQFPDALPACITHSADPPLMLYNRLVQEGAQHLYIDGG
HHHHHCCCCCCCEEEEEEECCCCCCCCCCHHHHCCCCCCCHHHHHHHHHCCCCEEEECCC
ATIQRFLAAGLIDELTITVIPILLGEGIPLFGSLAKEIPLTHLSSYSYDFGFVQLKYAVS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHCCCCCCCCEEEEEEEEC
>Mature Secondary Structure 
STKVSVFIATSLDGFIARTNGDIDWLNEANAAVPEGEDCGYQAFMASVDVLVMGRKTYE
CCEEEEEEEECCCCEEEECCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHEEECHHHHH
QVLSFGAWPYGQTRVIVLSRTPIQFPDALPACITHSADPPLMLYNRLVQEGAQHLYIDGG
HHHHHCCCCCCCEEEEEEECCCCCCCCCCHHHHCCCCCCCHHHHHHHHHCCCCEEEECCC
ATIQRFLAAGLIDELTITVIPILLGEGIPLFGSLAKEIPLTHLSSYSYDFGFVQLKYAVS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHCCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]