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The map label for this gene is infA [H]

Identifier: 158337830

GI number: 158337830

Start: 4739903

End: 4740127

Strand: Direct

Name: infA [H]

Synonym: AM1_4716

Alternate gene names: 158337830

Gene position: 4739903-4740127 (Clockwise)

Preceding gene: 158337829

Following gene: 158337831

Centisome position: 72.88

GC content: 47.11

Gene sequence:

>225_bases
TTGGCTAAGCAAGATGCGATTGAAATGGAAGGTACGGTCACAGAATCGTTGCCGAATGCCATGTTTCGCGTGGACCTAGA
TAACGGGTTTAATGTTCTAGCCCATATCTCTGGCAAGATTCGGCGGAACTATATTAAAATTTTGCCCGGTGATCGTGTCA
AGGTAGAGCTGACTCCCTACGATTTGACCAAAGGGCGGATCACCTACCGCTTGCGCAAAAAGTAA

Upstream 100 bases:

>100_bases
TTGGCAGATCTCACATAATTCTTTATACTCTCTGTGTAGAAGCTGGATAACCTATCATTCGGTAAATCGGTTCAAACTCA
TCCCTAGGAGGATCAACTTT

Downstream 100 bases:

>100_bases
CTCAACGACCCCAGGTACATTGCTCAAGATGCATTTGAGTTGCGATCGCAACTTTATCCATTGCTATGGTGTCCACTGAT
ACCCTGAAAGCGCAGCTACA

Product: translation initiation factor IF-1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 74; Mature: 73

Protein sequence:

>74_residues
MAKQDAIEMEGTVTESLPNAMFRVDLDNGFNVLAHISGKIRRNYIKILPGDRVKVELTPYDLTKGRITYRLRKK

Sequences:

>Translated_74_residues
MAKQDAIEMEGTVTESLPNAMFRVDLDNGFNVLAHISGKIRRNYIKILPGDRVKVELTPYDLTKGRITYRLRKK
>Mature_73_residues
AKQDAIEMEGTVTESLPNAMFRVDLDNGFNVLAHISGKIRRNYIKILPGDRVKVELTPYDLTKGRITYRLRKK

Specific function: No specific function has so far been attributed to this initiation factor; however, it seems to stimulate more or less all the activities of the other two initiation factors, IF-2 and IF-3 [H]

COG id: COG0361

COG function: function code J; Translation initiation factor 1 (IF-1)

Gene ontology:
GO:0003723: Translation initiation factor IF-1
GO:0003743: Translation initiation factor IF-1
GO:0005737: Translation initiation factor IF-1
GO:0006412: Translation initiation factor IF-1
GO:0006413: Translation initiation factor IF-1

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1-like domain [H]

Homologues:

Organism=Escherichia coli, GI1787110, Length=72, Percent_Identity=70.8333333333333, Blast_Score=111, Evalue=9e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR022967
- InterPro:   IPR006196
- InterPro:   IPR004368 [H]

Pfam domain/function: PF01176 eIF-1a [H]

EC number: NA

Molecular weight: Translated: 8507; Mature: 8376

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: PS50832 S1_IF1_TYPE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKQDAIEMEGTVTESLPNAMFRVDLDNGFNVLAHISGKIRRNYIKILPGDRVKVELTPY
CCCCCCEEECCCCCCCCCCEEEEEECCCCCEEEEEECCCEECCEEEECCCCEEEEEECCC
DLTKGRITYRLRKK
CCCCCEEEEEEECC
>Mature Secondary Structure 
AKQDAIEMEGTVTESLPNAMFRVDLDNGFNVLAHISGKIRRNYIKILPGDRVKVELTPY
CCCCCEEECCCCCCCCCCEEEEEECCCCCEEEEEECCCEECCEEEECCCCEEEEEECCC
DLTKGRITYRLRKK
CCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]