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The map label for this gene is psb27

Identifier: 158337545

GI number: 158337545

Start: 4450434

End: 4450844

Strand: Reverse

Name: psb27

Synonym: AM1_4426

Alternate gene names: NA

Gene position: 4450844-4450434 (Counterclockwise)

Preceding gene: 158337549

Following gene: 158337544

Centisome position: 68.44

GC content: 47.2

Gene sequence:

>411_bases
ATGAAGCGCTTTGTCTCCCGTCTACTCAGCTTAATGCTTGTAGCCTCGATGTTCTTAACTGGTTGCTCGCTTCTCTCTCC
TGAGACCCTTCTATCGGGTGACTATCAGCAAGACACCATTTACGTGATTGACAACCTCAGTAACGCGATCACCTTGCCTG
ATGATGATCCCAATAAAGCAGAAAATCAAGCAGCAGCCGGTGCGCTGATTAGTGAGTATGTATCTCGGTATCGTCGCAAG
CCCAAATTAGCAGGGTCTGCCTCCTTTATGACCATGGCAACGGCATTAAACGGCTTAGCTGGACACTATAACTCCTATCC
CAATCGTCCTCTACCTCAAAGACTCAAGGATCGTTTGGAGCAAGAGTTCAAACAAGCTAAGATTGCCCTCAAACGGGAAA
ATGCTGCTTAA

Upstream 100 bases:

>100_bases
ACAGTAATGTTTTATCCTTTAAAACTGTGGACTTTTTGACAGGCCGGAGTCAATCAAAATCCCACGTCATTATTTTGTTA
TACGAGATCCCATAATCATT

Downstream 100 bases:

>100_bases
CCCCCTCTTTGAAGGAATCTGCATATGTTTGGTTTAGGTTGGTTGGAAGTTGGACTCATTGCCCTTGCGGCAGTTGTCCT
GTTTGGTCCCAAGAAGTTAC

Product: photosystem II protein Psb27

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MKRFVSRLLSLMLVASMFLTGCSLLSPETLLSGDYQQDTIYVIDNLSNAITLPDDDPNKAENQAAAGALISEYVSRYRRK
PKLAGSASFMTMATALNGLAGHYNSYPNRPLPQRLKDRLEQEFKQAKIALKRENAA

Sequences:

>Translated_136_residues
MKRFVSRLLSLMLVASMFLTGCSLLSPETLLSGDYQQDTIYVIDNLSNAITLPDDDPNKAENQAAAGALISEYVSRYRRK
PKLAGSASFMTMATALNGLAGHYNSYPNRPLPQRLKDRLEQEFKQAKIALKRENAA
>Mature_136_residues
MKRFVSRLLSLMLVASMFLTGCSLLSPETLLSGDYQQDTIYVIDNLSNAITLPDDDPNKAENQAAAGALISEYVSRYRRK
PKLAGSASFMTMATALNGLAGHYNSYPNRPLPQRLKDRLEQEFKQAKIALKRENAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017488 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15099; Mature: 15099

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFVSRLLSLMLVASMFLTGCSLLSPETLLSGDYQQDTIYVIDNLSNAITLPDDDPNKA
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCEEEEEECCCCEEECCCCCCCHH
ENQAAAGALISEYVSRYRRKPKLAGSASFMTMATALNGLAGHYNSYPNRPLPQRLKDRLE
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
QEFKQAKIALKRENAA
HHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKRFVSRLLSLMLVASMFLTGCSLLSPETLLSGDYQQDTIYVIDNLSNAITLPDDDPNKA
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCEEEEEECCCCEEECCCCCCCHH
ENQAAAGALISEYVSRYRRKPKLAGSASFMTMATALNGLAGHYNSYPNRPLPQRLKDRLE
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
QEFKQAKIALKRENAA
HHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]