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The map label for this gene is ydiC [H]

Identifier: 158337543

GI number: 158337543

Start: 4449490

End: 4450155

Strand: Direct

Name: ydiC [H]

Synonym: AM1_4424

Alternate gene names: 158337543

Gene position: 4449490-4450155 (Clockwise)

Preceding gene: 158337533

Following gene: 158337546

Centisome position: 68.41

GC content: 50.6

Gene sequence:

>666_bases
GTGATCATTATCACGAAGTTCCAAATGCACGTTCTTGGCCTCGATACGACTAGCTCAGCGTTAACCTTAGGGATCTCCAA
CTTTGCGCAAATTAACCGTTATCAAACCTGGGATTTAGGCCGTGATATTTCCATTCACCTTCATGACTATTTAAAGGACT
TCCTAGCGCCCCTCTCTTGGTCTGACTTGGGGTGGCTAGTAGTTGCTCAAGGCCCTGGCAGCTTTACTGGTACCCGTATT
GGAGTGGTAACAGCACGAACCTTGGCCCAGCAGCTCAACATTCCTCTTTACGGTGTTTCCACCCTGACGGCTCAAGCGTA
TGCCTATGCAAGTAGCCTATCAAAAGTACATGAGGATGAGCTGATAGCGGTGGAGTATCCGGGACAGCGTGGATCAGTCT
ATGGCAGTCTTTTCACTTGGGACGCATCTACTCAGGCGTTATCGACCTACAAACCCCTCCAGTACGTTGAGCTAGAGGTG
TGGCAACATCTTCTATCCACTGAGAAGATTCACCATCATCTCTACCCCGACACCGTTGACCCCCAAGGCATTTGCCAAGC
CATGATTTCCTTAGCCCATCAACGATGGCAGGCTGGGCAGCAACCCACCTGGCAAGAAATTCTGCCCTACTATGGCTCTC
TCGCAGCAAGTCCACCCTCACGCTAA

Upstream 100 bases:

>100_bases
TTCGCCCAGAATGCGTTCCATAGTCCTATTGTGATTGTCCTGTCTACTGCGAACTGCAAGGTCGTGCAACCATCATCCCC
TGCCTTATTAGAATGAGAAG

Downstream 100 bases:

>100_bases
CCCATCACAATATGCAATACCCCCCTTTTCTCAGGTAGAGAAAAGGGGGGTATTGCATTAAACCCAGAAAGGATTGCTGC
TGGGCAAATCTAATCTTCAG

Product: glycoprotease family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MIIITKFQMHVLGLDTTSSALTLGISNFAQINRYQTWDLGRDISIHLHDYLKDFLAPLSWSDLGWLVVAQGPGSFTGTRI
GVVTARTLAQQLNIPLYGVSTLTAQAYAYASSLSKVHEDELIAVEYPGQRGSVYGSLFTWDASTQALSTYKPLQYVELEV
WQHLLSTEKIHHHLYPDTVDPQGICQAMISLAHQRWQAGQQPTWQEILPYYGSLAASPPSR

Sequences:

>Translated_221_residues
MIIITKFQMHVLGLDTTSSALTLGISNFAQINRYQTWDLGRDISIHLHDYLKDFLAPLSWSDLGWLVVAQGPGSFTGTRI
GVVTARTLAQQLNIPLYGVSTLTAQAYAYASSLSKVHEDELIAVEYPGQRGSVYGSLFTWDASTQALSTYKPLQYVELEV
WQHLLSTEKIHHHLYPDTVDPQGICQAMISLAHQRWQAGQQPTWQEILPYYGSLAASPPSR
>Mature_221_residues
MIIITKFQMHVLGLDTTSSALTLGISNFAQINRYQTWDLGRDISIHLHDYLKDFLAPLSWSDLGWLVVAQGPGSFTGTRI
GVVTARTLAQQLNIPLYGVSTLTAQAYAYASSLSKVHEDELIAVEYPGQRGSVYGSLFTWDASTQALSTYKPLQYVELEV
WQHLLSTEKIHHHLYPDTVDPQGICQAMISLAHQRWQAGQQPTWQEILPYYGSLAASPPSR

Specific function: Unknown

COG id: COG1214

COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M22 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022496
- InterPro:   IPR000905 [H]

Pfam domain/function: PF00814 Peptidase_M22 [H]

EC number: NA

Molecular weight: Translated: 24677; Mature: 24677

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIITKFQMHVLGLDTTSSALTLGISNFAQINRYQTWDLGRDISIHLHDYLKDFLAPLSW
CEEEEEEEEEEEECCCCCCCEEECHHHHHHHCCEEECCCCCCEEEHHHHHHHHHHCCCCC
SDLGWLVVAQGPGSFTGTRIGVVTARTLAQQLNIPLYGVSTLTAQAYAYASSLSKVHEDE
CCCCEEEEECCCCCCCCCEEHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHCCCC
LIAVEYPGQRGSVYGSLFTWDASTQALSTYKPLQYVELEVWQHLLSTEKIHHHLYPDTVD
EEEEECCCCCCCEEEEEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PQGICQAMISLAHQRWQAGQQPTWQEILPYYGSLAASPPSR
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MIIITKFQMHVLGLDTTSSALTLGISNFAQINRYQTWDLGRDISIHLHDYLKDFLAPLSW
CEEEEEEEEEEEECCCCCCCEEECHHHHHHHCCEEECCCCCCEEEHHHHHHHHHHCCCCC
SDLGWLVVAQGPGSFTGTRIGVVTARTLAQQLNIPLYGVSTLTAQAYAYASSLSKVHEDE
CCCCEEEEECCCCCCCCCEEHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHCCCC
LIAVEYPGQRGSVYGSLFTWDASTQALSTYKPLQYVELEVWQHLLSTEKIHHHLYPDTVD
EEEEECCCCCCCEEEEEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PQGICQAMISLAHQRWQAGQQPTWQEILPYYGSLAASPPSR
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]