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The map label for this gene is cbiD [H]

Identifier: 158337546

GI number: 158337546

Start: 4450977

End: 4452125

Strand: Direct

Name: cbiD [H]

Synonym: AM1_4427

Alternate gene names: 158337546

Gene position: 4450977-4452125 (Clockwise)

Preceding gene: 158337543

Following gene: 158337547

Centisome position: 68.44

GC content: 50.83

Gene sequence:

>1149_bases
ATGCCAACTCCTCCACCCCGCGCTGGCTATACTTTACCCGTTTTTGCTTGCGCTGCTGCGATCGCAGCCCTGCATCACCT
CTACGACTCAATTGCGCCTTCCCAGGTGACCCTGGATTTAATCAATCCTCCGCAGTCTGTTGAAATCCCCATTGAACAGG
TCTCAAAATTAGGGCCTCGTCAGGCCCTAGCGATTACCCGTAGCGATCCCGGCGATAATTTAGACCTAACGCGTCATACT
CCGATCTGGGCCCTGGTGGAATGGGCTTCACCCGAGCAAACTGAATCAATTGTTCTACTCGGAGGAGAGGGGGTTGGTAT
CAATCGAAACCAAGGCGATCAAGCTGCCATCTACAGCTATGCCCAACAGCTTCTGTACATCAACTTGGAGCAACATCTCC
AGCCAGGAGACCGAATTCAGGTTACGCTGATCTTGCCCGAGGGGCGGGCCTTGGCCAAACGCACCTCCAATGAGGCATTT
GGGGTGGTGGAAGGGTTGTCTTTACTAGGAACATCAGGGATCTCTCAGCCCTTGAGTGCCCCTCAACAGTTAGATCAATT
TCGACTTGAGCTTCAACAGAAAGCGATTGATCAGAAACATCTGGTGTTTTGTGTGGGGGAGAATGGTCTAGATATTGCTC
GTACTTTGGGCATTCCTCCCGAAGTTCAGATCAAAACCGCCAACTGGTTGGGGCCGCTGTTAGTAGAAGCTGGCTTTCAA
GGCGTCTCTTCCGTTCTATTACTGGGGTATCATGGCAAACTGCTGAAGCTGGCGGGGGGGATTTTTCAGACTCACCACCA
TTTAGCAGATGCACGCTTGGAAATTTTAACGGCCTATGCCGCTAATTTAGGACTGCCTTCCCCCCAGATTCAATCCCTAT
TTGCCAGTCCAACAGCCGAAGCAGCGCTGCAATTCTTAATGAATTTCGATCACCAAACCCAGAATCGCTGGGTGGACACT
GTCTATGGGGCCATAACTCAAAGAATCGATGTGCGATCGCAAACTTATATCCATACCCATTGCGATCGCACCGTCCAAGT
GGGTTCAGCACTCTTTAACCGCAACCGCCAACTGTTTGCAGTCAGTGCTTTCGGCACCCATTTACTGCAGCGTTTTGTCA
GCAATCCCCAGATTGACTTAAACTTGTAA

Upstream 100 bases:

>100_bases
GACGTGGGATTTTGATTGACTCCGGCCTGTCAAAAAGTCCACAGTTTTAAAGGATAAAACATTACTGTTCTGAATGCTCT
GGCAAATGGGGCATTTCTTC

Downstream 100 bases:

>100_bases
AAATATTTATACCTATTTTCAAAGCCTCCACAGTATATTCTTTCATCGCTAGTTATCCATACTTCGGGTTCTAGGGTTTT
CTAATTTTTTGTTTAACTTT

Product: cobalt-precorrin-6A synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 381

Protein sequence:

>382_residues
MPTPPPRAGYTLPVFACAAAIAALHHLYDSIAPSQVTLDLINPPQSVEIPIEQVSKLGPRQALAITRSDPGDNLDLTRHT
PIWALVEWASPEQTESIVLLGGEGVGINRNQGDQAAIYSYAQQLLYINLEQHLQPGDRIQVTLILPEGRALAKRTSNEAF
GVVEGLSLLGTSGISQPLSAPQQLDQFRLELQQKAIDQKHLVFCVGENGLDIARTLGIPPEVQIKTANWLGPLLVEAGFQ
GVSSVLLLGYHGKLLKLAGGIFQTHHHLADARLEILTAYAANLGLPSPQIQSLFASPTAEAALQFLMNFDHQTQNRWVDT
VYGAITQRIDVRSQTYIHTHCDRTVQVGSALFNRNRQLFAVSAFGTHLLQRFVSNPQIDLNL

Sequences:

>Translated_382_residues
MPTPPPRAGYTLPVFACAAAIAALHHLYDSIAPSQVTLDLINPPQSVEIPIEQVSKLGPRQALAITRSDPGDNLDLTRHT
PIWALVEWASPEQTESIVLLGGEGVGINRNQGDQAAIYSYAQQLLYINLEQHLQPGDRIQVTLILPEGRALAKRTSNEAF
GVVEGLSLLGTSGISQPLSAPQQLDQFRLELQQKAIDQKHLVFCVGENGLDIARTLGIPPEVQIKTANWLGPLLVEAGFQ
GVSSVLLLGYHGKLLKLAGGIFQTHHHLADARLEILTAYAANLGLPSPQIQSLFASPTAEAALQFLMNFDHQTQNRWVDT
VYGAITQRIDVRSQTYIHTHCDRTVQVGSALFNRNRQLFAVSAFGTHLLQRFVSNPQIDLNL
>Mature_381_residues
PTPPPRAGYTLPVFACAAAIAALHHLYDSIAPSQVTLDLINPPQSVEIPIEQVSKLGPRQALAITRSDPGDNLDLTRHTP
IWALVEWASPEQTESIVLLGGEGVGINRNQGDQAAIYSYAQQLLYINLEQHLQPGDRIQVTLILPEGRALAKRTSNEAFG
VVEGLSLLGTSGISQPLSAPQQLDQFRLELQQKAIDQKHLVFCVGENGLDIARTLGIPPEVQIKTANWLGPLLVEAGFQG
VSSVLLLGYHGKLLKLAGGIFQTHHHLADARLEILTAYAANLGLPSPQIQSLFASPTAEAALQFLMNFDHQTQNRWVDTV
YGAITQRIDVRSQTYIHTHCDRTVQVGSALFNRNRQLFAVSAFGTHLLQRFVSNPQIDLNL

Specific function: May catalyze the methylation of C-1 in cobalt-precorrin- 5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A [H]

COG id: COG1903

COG function: function code H; Cobalamin biosynthesis protein CbiD

Gene ontology:
GO:0008168: Putative cobalt-precorrin-6A synthase [deacetylating]
GO:0009236: Putative cobalt-precorrin-6A synthase [deacetylating]
GO:0015420: Putative cobalt-precorrin-6A synthase [deacetylating]
GO:0016740: Putative cobalt-precorrin-6A synthase [deacetylating]
GO:0032259: Putative cobalt-precorrin-6A synthase [deacetylating]
GO:0046140: Putative cobalt-precorrin-6A synthase [deacetylating]

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002748 [H]

Pfam domain/function: PF01888 CbiD [H]

EC number: NA

Molecular weight: Translated: 41747; Mature: 41616

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTPPPRAGYTLPVFACAAAIAALHHLYDSIAPSQVTLDLINPPQSVEIPIEQVSKLGPR
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHCCCCC
QALAITRSDPGDNLDLTRHTPIWALVEWASPEQTESIVLLGGEGVGINRNQGDQAAIYSY
CEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHH
AQQLLYINLEQHLQPGDRIQVTLILPEGRALAKRTSNEAFGVVEGLSLLGTSGISQPLSA
HHHHHEEEHHHHCCCCCEEEEEEEECCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCC
PQQLDQFRLELQQKAIDQKHLVFCVGENGLDIARTLGIPPEVQIKTANWLGPLLVEAGFQ
HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHCCCCCCEEEEECCCHHHHHHHHHHH
GVSSVLLLGYHGKLLKLAGGIFQTHHHLADARLEILTAYAANLGLPSPQIQSLFASPTAE
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHH
AALQFLMNFDHQTQNRWVDTVYGAITQRIDVRSQTYIHTHCDRTVQVGSALFNRNRQLFA
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCEEEE
VSAFGTHLLQRFVSNPQIDLNL
EHHHHHHHHHHHHCCCCEEECC
>Mature Secondary Structure 
PTPPPRAGYTLPVFACAAAIAALHHLYDSIAPSQVTLDLINPPQSVEIPIEQVSKLGPR
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHCCCCC
QALAITRSDPGDNLDLTRHTPIWALVEWASPEQTESIVLLGGEGVGINRNQGDQAAIYSY
CEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHH
AQQLLYINLEQHLQPGDRIQVTLILPEGRALAKRTSNEAFGVVEGLSLLGTSGISQPLSA
HHHHHEEEHHHHCCCCCEEEEEEEECCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCC
PQQLDQFRLELQQKAIDQKHLVFCVGENGLDIARTLGIPPEVQIKTANWLGPLLVEAGFQ
HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHCCCCCCEEEEECCCHHHHHHHHHHH
GVSSVLLLGYHGKLLKLAGGIFQTHHHLADARLEILTAYAANLGLPSPQIQSLFASPTAE
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHH
AALQFLMNFDHQTQNRWVDTVYGAITQRIDVRSQTYIHTHCDRTVQVGSALFNRNRQLFA
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCEEEE
VSAFGTHLLQRFVSNPQIDLNL
EHHHHHHHHHHHHCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA