| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158337475
Identifier: 158337475
GI number: 158337475
Start: 4383112
End: 4384506
Strand: Direct
Name: 158337475
Synonym: AM1_4355
Alternate gene names: NA
Gene position: 4383112-4384506 (Clockwise)
Preceding gene: 158337474
Following gene: 158337485
Centisome position: 67.39
GC content: 48.1
Gene sequence:
>1395_bases ATGAGCGTATCTTTATCTCGCCCTCCCCTGTGGTTTTGGATAGGAATCAGTTGCGTTTGGATCTTTGCCTTAGCCTTCCG TTTTTGGGGATTAGAACGGTTTAATACCCTCGTGTTTGATGAGGTCTACTTTGCAAAGTTTGGCCATAACTACCTCACCC AAACGGAATTTTTTGATGCTCATCCTCCGTTAGGCAAGTATTTAATTGCCTTGGGCATCGCCCTCAAGGGCTTTAACACT TGGGGATTTCGATGGATGAATGCTCTGATTGGGGCTACGATTCCGCTGATCCTGTCGGGCATTGCCTATCAACTCTGCAA GCGCCCCAGCTATGCTTTGATCACCGCTGTCTTAGCGAGTTTAGATGGTCTCCTTTTGGTGGAATCACGGTATGCCCTGC TCAATGTCCACATCCTATTTTTTGGTCTGTTGGCCCATTGGTTGGTCTTAATCTCCCTCAACCATCAAGGGATGCAGCGG AATGGGTGGCTGGCAGCTGCGGGTATTAGTTTTGGGGCAGCGATAGCCGTCAAATGGAATGGCTTAGGGCTTTTACTCGG CCTTTATCTGCTGTGGTTGGTGGCGAAAGGCGGTCAGATATGGTTGGGATCGTCAGAGACCCCAAAGCGACGATTACCCC TTCAAAAATTATCAGAGCTATCCTGGCTGCAGATGTTTGTGTATCTGCCTGCGATCGCACTCTTTGTCTACGGCATTTTA TGGCTTCCCCATTTAGCTCAAAACCCTGAATTTAACCTTTGGCAGGTCCATCAAGAAATCTTTAACTACCATCGGCGAGT CGGAGGAGATGAGGTCCATCCCTACTGTTCGTCTTGGTATACCTGGCCTTTACTGCTCAAGCCCATTAGCTATTTTTATC AAGTTACCCAAAGCACTCTAGAACCGTTGCCCGTCACGGGTCCTCCTTTGCCTCAAGATGCGGTGAAATGGATTTACAGT GTGTATGCGATTGGCAACCCCTTTCTATGGTGGTCGAGCACCATTGCTATCTGCGCCTTATTAGTCTTGGGAAGGTTACA GATCCATCACAACCGAGTTCGACATATTAAAGGGCTTTATCCAACTAGCCACTCTTCTGATGAACAGAGTTGGATTTCTC TATATTTGGGCGTGAACTATTTGGCTAATTTTTTGCCTTGGGTGGGGGTGAGTCGATGTACGTTTTTGTACCACTATATG CCCGCATCCATGTTTACCAGCCTCGCCTTGGCCTGGTATATCGAGGGTTGGCTGCGGGTCTCAAACAAGTGGATGCGGCG GCTGGCTGTGGCTGTACTAGTGCTTAGCCTAGTTAGCTTTGTAATCTGTTTACCGATTTTCTTAGGGCTACCGATATCGC CCATGATGTGGCGACTTTTAAGAGCCAAGGGTTAA
Upstream 100 bases:
>100_bases AAATACTCAAGTCGGCCAAAATCTACAGCTTGTCCTCAAGCGTGGTGAACGCACTCAGCAGATTGCTGTGCGGACAGCAG CCCTGGAAAATGCGGCCTAG
Downstream 100 bases:
>100_bases GTCGATTGACTGGTTAGGGCTTCGGGTTCCAACTTGACTTCTTCAATGGCGCCAGGCTCTCCCATAAGTTGGGCGGGTTT TTTATTGACGGCCATCATAA
Product: dolichyl-phosphate-mannose-protein mannosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 464; Mature: 463
Protein sequence:
>464_residues MSVSLSRPPLWFWIGISCVWIFALAFRFWGLERFNTLVFDEVYFAKFGHNYLTQTEFFDAHPPLGKYLIALGIALKGFNT WGFRWMNALIGATIPLILSGIAYQLCKRPSYALITAVLASLDGLLLVESRYALLNVHILFFGLLAHWLVLISLNHQGMQR NGWLAAAGISFGAAIAVKWNGLGLLLGLYLLWLVAKGGQIWLGSSETPKRRLPLQKLSELSWLQMFVYLPAIALFVYGIL WLPHLAQNPEFNLWQVHQEIFNYHRRVGGDEVHPYCSSWYTWPLLLKPISYFYQVTQSTLEPLPVTGPPLPQDAVKWIYS VYAIGNPFLWWSSTIAICALLVLGRLQIHHNRVRHIKGLYPTSHSSDEQSWISLYLGVNYLANFLPWVGVSRCTFLYHYM PASMFTSLALAWYIEGWLRVSNKWMRRLAVAVLVLSLVSFVICLPIFLGLPISPMMWRLLRAKG
Sequences:
>Translated_464_residues MSVSLSRPPLWFWIGISCVWIFALAFRFWGLERFNTLVFDEVYFAKFGHNYLTQTEFFDAHPPLGKYLIALGIALKGFNT WGFRWMNALIGATIPLILSGIAYQLCKRPSYALITAVLASLDGLLLVESRYALLNVHILFFGLLAHWLVLISLNHQGMQR NGWLAAAGISFGAAIAVKWNGLGLLLGLYLLWLVAKGGQIWLGSSETPKRRLPLQKLSELSWLQMFVYLPAIALFVYGIL WLPHLAQNPEFNLWQVHQEIFNYHRRVGGDEVHPYCSSWYTWPLLLKPISYFYQVTQSTLEPLPVTGPPLPQDAVKWIYS VYAIGNPFLWWSSTIAICALLVLGRLQIHHNRVRHIKGLYPTSHSSDEQSWISLYLGVNYLANFLPWVGVSRCTFLYHYM PASMFTSLALAWYIEGWLRVSNKWMRRLAVAVLVLSLVSFVICLPIFLGLPISPMMWRLLRAKG >Mature_463_residues SVSLSRPPLWFWIGISCVWIFALAFRFWGLERFNTLVFDEVYFAKFGHNYLTQTEFFDAHPPLGKYLIALGIALKGFNTW GFRWMNALIGATIPLILSGIAYQLCKRPSYALITAVLASLDGLLLVESRYALLNVHILFFGLLAHWLVLISLNHQGMQRN GWLAAAGISFGAAIAVKWNGLGLLLGLYLLWLVAKGGQIWLGSSETPKRRLPLQKLSELSWLQMFVYLPAIALFVYGILW LPHLAQNPEFNLWQVHQEIFNYHRRVGGDEVHPYCSSWYTWPLLLKPISYFYQVTQSTLEPLPVTGPPLPQDAVKWIYSV YAIGNPFLWWSSTIAICALLVLGRLQIHHNRVRHIKGLYPTSHSSDEQSWISLYLGVNYLANFLPWVGVSRCTFLYHYMP ASMFTSLALAWYIEGWLRVSNKWMRRLAVAVLVLSLVSFVICLPIFLGLPISPMMWRLLRAKG
Specific function: Unknown
COG id: COG1928
COG function: function code O; Dolichyl-phosphate-mannose--protein O-mannosyl transferase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 39 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6321638, Length=198, Percent_Identity=30.8080808080808, Blast_Score=76, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6320107, Length=198, Percent_Identity=29.2929292929293, Blast_Score=67, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6319296, Length=192, Percent_Identity=30.7291666666667, Blast_Score=64, Evalue=5e-11, Organism=Drosophila melanogaster, GI20128815, Length=209, Percent_Identity=31.1004784688995, Blast_Score=71, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003342 [H]
Pfam domain/function: PF02366 PMT [H]
EC number: NA
Molecular weight: Translated: 53068; Mature: 52937
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVSLSRPPLWFWIGISCVWIFALAFRFWGLERFNTLVFDEVYFAKFGHNYLTQTEFFDA CCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCC HPPLGKYLIALGIALKGFNTWGFRWMNALIGATIPLILSGIAYQLCKRPSYALITAVLAS CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH LDGLLLVESRYALLNVHILFFGLLAHWLVLISLNHQGMQRNGWLAAAGISFGAAIAVKWN CCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEEEEEEC GLGLLLGLYLLWLVAKGGQIWLGSSETPKRRLPLQKLSELSWLQMFVYLPAIALFVYGIL CHHHHHHHHHHHHHHCCCEEEECCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH WLPHLAQNPEFNLWQVHQEIFNYHRRVGGDEVHPYCSSWYTWPLLLKPISYFYQVTQSTL HHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHC EPLPVTGPPLPQDAVKWIYSVYAIGNPFLWWSSTIAICALLVLGRLQIHHNRVRHIKGLY CCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PTSHSSDEQSWISLYLGVNYLANFLPWVGVSRCTFLYHYMPASMFTSLALAWYIEGWLRV CCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SNKWMRRLAVAVLVLSLVSFVICLPIFLGLPISPMMWRLLRAKG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC >Mature Secondary Structure SVSLSRPPLWFWIGISCVWIFALAFRFWGLERFNTLVFDEVYFAKFGHNYLTQTEFFDA CCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCC HPPLGKYLIALGIALKGFNTWGFRWMNALIGATIPLILSGIAYQLCKRPSYALITAVLAS CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH LDGLLLVESRYALLNVHILFFGLLAHWLVLISLNHQGMQRNGWLAAAGISFGAAIAVKWN CCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEEEEEEC GLGLLLGLYLLWLVAKGGQIWLGSSETPKRRLPLQKLSELSWLQMFVYLPAIALFVYGIL CHHHHHHHHHHHHHHCCCEEEECCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH WLPHLAQNPEFNLWQVHQEIFNYHRRVGGDEVHPYCSSWYTWPLLLKPISYFYQVTQSTL HHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHC EPLPVTGPPLPQDAVKWIYSVYAIGNPFLWWSSTIAICALLVLGRLQIHHNRVRHIKGLY CCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PTSHSSDEQSWISLYLGVNYLANFLPWVGVSRCTFLYHYMPASMFTSLALAWYIEGWLRV CCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SNKWMRRLAVAVLVLSLVSFVICLPIFLGLPISPMMWRLLRAKG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]