| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158337312
Identifier: 158337312
GI number: 158337312
Start: 4215289
End: 4216542
Strand: Direct
Name: 158337312
Synonym: AM1_4190
Alternate gene names: NA
Gene position: 4215289-4216542 (Clockwise)
Preceding gene: 158337309
Following gene: 158337313
Centisome position: 64.81
GC content: 53.51
Gene sequence:
>1254_bases ATGCGGACGTTTCATTGGATAAGTTTGGGAGTGGGTCTAGCGTTTATACCTTGGCATCCCACCCTAGCCCAGTCTTCTGC TCCGACAACACCCACTGCTGAATCAGCCCTCACCTCTACCGTTAAAGGCAACTGCGGCACTGAGCAAACCTGCGAGCAGC TTTTACAGACCCTCCGTACTCAATGGCCGACTGCCAAGCTGAATTGCACTCGAGATCGCATTCTGTCTCTCCGGGTCTTT CAGAACGACCGAGGGGGGCGACAGGTGCATGTGACGTGTTGGGACACTGAAGTCAAAAAAGGCGACCGCTATGGCTTATC TCGCGATTCTCTCCCCTATCCAGGCGATGAAGCTCAGTTCCTGCCGCCCCTGCCTCGCCGATCTCGCTATACCGAGCCCT TACAAACCCGTTTCCCAGGGCCCGTTCGCACCAGTCAAAATGAGTGCGGTTCTCTAGGGGGAGACATTCAATACCGGGCT CGCAAAGATATCGACCGACTGGAGCTGCAATGTGTATTTACCGTTGGCGCAGTGTTGATTGACACTGATGGAGACTTTAT TTCCGATGGCGAAGCGTCCAGAGGCTCACTCATCGATAAAATTGTTGGCAAATTCGCCATTTCTGAGCTGGAAAAGCCCC TAGTCGCGCCACCTCCCACCGCCAGCACCCCAACCGAACCCCCTGTTGATAACACTGCACTCCCTCCCTTACAGGGAGAA GACAGTGTTTCTGATGTCTTTCCCAATGCCTCTCCAACCCCCACGACGAATGGAGCAGTGCCTGCACAGACTACAGCCCC CACGGCAGCTGCAAGGCCGACAAATTCCACTCCCTCAGCTCCCACCGCCAGACATGCTGCCCTTCAAGCTATCGATGTGC AAATTTTCAACCGGGTGAATAATCAGCTGGTTCCCCTCAACCAACGCTGGAATCCCTATGGTCTAGGGATGGACTTACTG ATTGCCGTCAAAGTGAAACCGGGTCAACAAGAGACTCAACCCGGCACCAATTTAGTGCTGGCGATCAACGCCAAAGGCTA CGACTCACCAGCCACAGGACCTGTTCCAGCCTGGAATTCAGTGCAAACGCGATCCATTGCTGTGAGCGCCAATGATCAAC TAAGTTACTCGTTTCCCTTTCTAGCAGAGTATCAGTGCTATTCCGAAGTGCAGTTAACCGCAACCCTGATTCAGCCTGGT CTAATTACAGGACCTAGCCTGACGAAAACCATTAACCTGGGTTGTGCGGAATAG
Upstream 100 bases:
>100_bases GTTCCCGAATCATGTAAATTACGGAACAATATAAGGTCATTTGTAGACGATATCTACGATGCGGAGACATCGGACACATT GCTCAAAGGAAGAACAGACT
Downstream 100 bases:
>100_bases ATTGTGGTCTTTTAAGGACTTATCGTTGCTAGTGCCTCCCTGTTATACGAAAATCCCTCCGTACTGGGCTATTTCACCGC CAGAGATAAATCCACTGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 417; Mature: 417
Protein sequence:
>417_residues MRTFHWISLGVGLAFIPWHPTLAQSSAPTTPTAESALTSTVKGNCGTEQTCEQLLQTLRTQWPTAKLNCTRDRILSLRVF QNDRGGRQVHVTCWDTEVKKGDRYGLSRDSLPYPGDEAQFLPPLPRRSRYTEPLQTRFPGPVRTSQNECGSLGGDIQYRA RKDIDRLELQCVFTVGAVLIDTDGDFISDGEASRGSLIDKIVGKFAISELEKPLVAPPPTASTPTEPPVDNTALPPLQGE DSVSDVFPNASPTPTTNGAVPAQTTAPTAAARPTNSTPSAPTARHAALQAIDVQIFNRVNNQLVPLNQRWNPYGLGMDLL IAVKVKPGQQETQPGTNLVLAINAKGYDSPATGPVPAWNSVQTRSIAVSANDQLSYSFPFLAEYQCYSEVQLTATLIQPG LITGPSLTKTINLGCAE
Sequences:
>Translated_417_residues MRTFHWISLGVGLAFIPWHPTLAQSSAPTTPTAESALTSTVKGNCGTEQTCEQLLQTLRTQWPTAKLNCTRDRILSLRVF QNDRGGRQVHVTCWDTEVKKGDRYGLSRDSLPYPGDEAQFLPPLPRRSRYTEPLQTRFPGPVRTSQNECGSLGGDIQYRA RKDIDRLELQCVFTVGAVLIDTDGDFISDGEASRGSLIDKIVGKFAISELEKPLVAPPPTASTPTEPPVDNTALPPLQGE DSVSDVFPNASPTPTTNGAVPAQTTAPTAAARPTNSTPSAPTARHAALQAIDVQIFNRVNNQLVPLNQRWNPYGLGMDLL IAVKVKPGQQETQPGTNLVLAINAKGYDSPATGPVPAWNSVQTRSIAVSANDQLSYSFPFLAEYQCYSEVQLTATLIQPG LITGPSLTKTINLGCAE >Mature_417_residues MRTFHWISLGVGLAFIPWHPTLAQSSAPTTPTAESALTSTVKGNCGTEQTCEQLLQTLRTQWPTAKLNCTRDRILSLRVF QNDRGGRQVHVTCWDTEVKKGDRYGLSRDSLPYPGDEAQFLPPLPRRSRYTEPLQTRFPGPVRTSQNECGSLGGDIQYRA RKDIDRLELQCVFTVGAVLIDTDGDFISDGEASRGSLIDKIVGKFAISELEKPLVAPPPTASTPTEPPVDNTALPPLQGE DSVSDVFPNASPTPTTNGAVPAQTTAPTAAARPTNSTPSAPTARHAALQAIDVQIFNRVNNQLVPLNQRWNPYGLGMDLL IAVKVKPGQQETQPGTNLVLAINAKGYDSPATGPVPAWNSVQTRSIAVSANDQLSYSFPFLAEYQCYSEVQLTATLIQPG LITGPSLTKTINLGCAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45031; Mature: 45031
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: PS01067 SECE_SEC61G
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTFHWISLGVGLAFIPWHPTLAQSSAPTTPTAESALTSTVKGNCGTEQTCEQLLQTLRT CCEEEEEEECCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHH QWPTAKLNCTRDRILSLRVFQNDRGGRQVHVTCWDTEVKKGDRYGLSRDSLPYPGDEAQF CCCCCEEECCHHHEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC LPPLPRRSRYTEPLQTRFPGPVRTSQNECGSLGGDIQYRARKDIDRLELQCVFTVGAVLI CCCCCCCCCCCCCHHHCCCCCCCCCCHHHCCCCCCEEEHHHCCCHHHHEEEEEEEEEEEE DTDGDFISDGEASRGSLIDKIVGKFAISELEKPLVAPPPTASTPTEPPVDNTALPPLQGE ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DSVSDVFPNASPTPTTNGAVPAQTTAPTAAARPTNSTPSAPTARHAALQAIDVQIFNRVN CCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC NQLVPLNQRWNPYGLGMDLLIAVKVKPGQQETQPGTNLVLAINAKGYDSPATGPVPAWNS CCEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCC VQTRSIAVSANDQLSYSFPFLAEYQCYSEVQLTATLIQPGLITGPSLTKTINLGCAE CCEEEEEEECCCCEEECCCCCCCHHHHCHHEEEEEECCCCCCCCCCCEEEEECCCCC >Mature Secondary Structure MRTFHWISLGVGLAFIPWHPTLAQSSAPTTPTAESALTSTVKGNCGTEQTCEQLLQTLRT CCEEEEEEECCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHH QWPTAKLNCTRDRILSLRVFQNDRGGRQVHVTCWDTEVKKGDRYGLSRDSLPYPGDEAQF CCCCCEEECCHHHEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC LPPLPRRSRYTEPLQTRFPGPVRTSQNECGSLGGDIQYRARKDIDRLELQCVFTVGAVLI CCCCCCCCCCCCCHHHCCCCCCCCCCHHHCCCCCCEEEHHHCCCHHHHEEEEEEEEEEEE DTDGDFISDGEASRGSLIDKIVGKFAISELEKPLVAPPPTASTPTEPPVDNTALPPLQGE ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DSVSDVFPNASPTPTTNGAVPAQTTAPTAAARPTNSTPSAPTARHAALQAIDVQIFNRVN CCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC NQLVPLNQRWNPYGLGMDLLIAVKVKPGQQETQPGTNLVLAINAKGYDSPATGPVPAWNS CCEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCC VQTRSIAVSANDQLSYSFPFLAEYQCYSEVQLTATLIQPGLITGPSLTKTINLGCAE CCEEEEEEECCCCEEECCCCCCCHHHHCHHEEEEEECCCCCCCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA