| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158337313
Identifier: 158337313
GI number: 158337313
Start: 4216843
End: 4217658
Strand: Direct
Name: 158337313
Synonym: AM1_4191
Alternate gene names: NA
Gene position: 4216843-4217658 (Clockwise)
Preceding gene: 158337312
Following gene: 158337314
Centisome position: 64.84
GC content: 47.92
Gene sequence:
>816_bases ATGGGATGCGCCCTTCTGAGGCTAGTGAGCTGTTCGATATCAGTCGTAACACCATTAACCAATGGCAACACCTCAAGGCG GAAACGGGTGATTTGCATCCCAAGCCAGTCCATCATCCTGGCCATAGCCATAAAATCACTGACTGGGACAAGTTTCGAGC GTTTGCCCACAAGCATCGTCATAAAACCCAAGCTCAGATGGCTCAACTATGGGATGGAGAGATTAGTGATCGAACCATCT CAAGAGCCCTCCAGAAAATCGGATTTACTCGAAAAAAAAACATATGGGTACCGAGAACGAGATAAGCACAAACGGGCAGC GTTCATCAAACGTCTGAGTACCGTGGACCCAGACGATATCGTCTATGCGGATGAGTCGGGCATGGATCATCGAGACGAGT ATGACTATGCTTATGGCCCCAAAGGTGAGCGGGTTTATGCTTTGAAGACTGGGCGTAGAAGCGGCCGAGTCAATATGATT GCGGCGTTGAGAGCAAAGCAGTTGATGGCACCGTTCACGATCGAAGGAGCTTGCAATCGGACTGTGTTTGAACTTTGGCT AGAGCGTTGCTTGATACCCGTGCTCAAGCCTGGGCAGAAGCTGGTGATAGATAATGCCACTTTTCACAAGGGAGGACAAA TACAGGAATTAGTGGAAAAAGCAGGATGTGAGGTTTGGTATTTACCGCCTTATTCCCCTGACTTGAACAAGATTGAGCGG TCTTGGTCTTGGATTAAAAGTCGCATCCGTCACCAATTAGAACATTTTGGATCTCTCAGAGAAGCAATGGAACATGTTCT ACATCTAGTGTCCTGA
Upstream 100 bases:
>100_bases AGGACTTAAACTAGAGAAGTATTTTATTCCTTCTCCTATGTGATGCCCAAAATTTATAGTTTCGACCTACGTTGCAAAGT GATAGATGCGATTGAGCTAG
Downstream 100 bases:
>100_bases ATAGAATGGCGACTGCTATAACAAGTGAGGAAGATCGCTCAGACTAAATTGACCCCAAGCATGGCTACATTCTCAGTAGA AATGCAATTGATTTCTTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: Transposase Of Insertion Sequence; Transposase And Inactivated Derivatives-Like Protein; ISSpo6 Transposase OrfB; LOW QUALITY PROTEIN Transposase; Insertion Sequence Transposase Protein; Transposase For Insertion Sequence Element; Degenerate Transposase; ISHde6 Transposase OrfB; Transposase Family Protein; Transposase IS; ISRin2 Transposase OrfB; ISSoc4 Transposase OrfAB; ISHde1 Transposase OrfB; Transposase And Inactivated Derivative; Transposase Fragment
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MGCALLRLVSCSISVVTPLTNGNTSRRKRVICIPSQSIILAIAIKSLTGTSFERLPTSIVIKPKLRWLNYGMERLVIEPS QEPSRKSDLLEKKTYGYRERDKHKRAAFIKRLSTVDPDDIVYADESGMDHRDEYDYAYGPKGERVYALKTGRRSGRVNMI AALRAKQLMAPFTIEGACNRTVFELWLERCLIPVLKPGQKLVIDNATFHKGGQIQELVEKAGCEVWYLPPYSPDLNKIER SWSWIKSRIRHQLEHFGSLREAMEHVLHLVS
Sequences:
>Translated_271_residues MGCALLRLVSCSISVVTPLTNGNTSRRKRVICIPSQSIILAIAIKSLTGTSFERLPTSIVIKPKLRWLNYGMERLVIEPS QEPSRKSDLLEKKTYGYRERDKHKRAAFIKRLSTVDPDDIVYADESGMDHRDEYDYAYGPKGERVYALKTGRRSGRVNMI AALRAKQLMAPFTIEGACNRTVFELWLERCLIPVLKPGQKLVIDNATFHKGGQIQELVEKAGCEVWYLPPYSPDLNKIER SWSWIKSRIRHQLEHFGSLREAMEHVLHLVS >Mature_270_residues GCALLRLVSCSISVVTPLTNGNTSRRKRVICIPSQSIILAIAIKSLTGTSFERLPTSIVIKPKLRWLNYGMERLVIEPSQ EPSRKSDLLEKKTYGYRERDKHKRAAFIKRLSTVDPDDIVYADESGMDHRDEYDYAYGPKGERVYALKTGRRSGRVNMIA ALRAKQLMAPFTIEGACNRTVFELWLERCLIPVLKPGQKLVIDNATFHKGGQIQELVEKAGCEVWYLPPYSPDLNKIERS WSWIKSRIRHQLEHFGSLREAMEHVLHLVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30997; Mature: 30866
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGCALLRLVSCSISVVTPLTNGNTSRRKRVICIPSQSIILAIAIKSLTGTSFERLPTSIV CCHHHHHHHHCCEEEEEECCCCCCCCCEEEEEECCCCEEEEEEEHHHCCCCHHHCCCEEE IKPKLRWLNYGMERLVIEPSQEPSRKSDLLEKKTYGYRERDKHKRAAFIKRLSTVDPDDI EECCHHHHHCCCHHEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCE VYADESGMDHRDEYDYAYGPKGERVYALKTGRRSGRVNMIAALRAKQLMAPFTIEGACNR EEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCEEECCCCCH TVFELWLERCLIPVLKPGQKLVIDNATFHKGGQIQELVEKAGCEVWYLPPYSPDLNKIER HHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCCHHHHHH SWSWIKSRIRHQLEHFGSLREAMEHVLHLVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GCALLRLVSCSISVVTPLTNGNTSRRKRVICIPSQSIILAIAIKSLTGTSFERLPTSIV CHHHHHHHHCCEEEEEECCCCCCCCCEEEEEECCCCEEEEEEEHHHCCCCHHHCCCEEE IKPKLRWLNYGMERLVIEPSQEPSRKSDLLEKKTYGYRERDKHKRAAFIKRLSTVDPDDI EECCHHHHHCCCHHEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCE VYADESGMDHRDEYDYAYGPKGERVYALKTGRRSGRVNMIAALRAKQLMAPFTIEGACNR EEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCEEECCCCCH TVFELWLERCLIPVLKPGQKLVIDNATFHKGGQIQELVEKAGCEVWYLPPYSPDLNKIER HHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCCHHHHHH SWSWIKSRIRHQLEHFGSLREAMEHVLHLVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA