| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158337168
Identifier: 158337168
GI number: 158337168
Start: 4089626
End: 4090663
Strand: Reverse
Name: 158337168
Synonym: AM1_4044
Alternate gene names: NA
Gene position: 4090663-4089626 (Counterclockwise)
Preceding gene: 158337169
Following gene: 158337167
Centisome position: 62.9
GC content: 47.3
Gene sequence:
>1038_bases GTGCAAGATACATCCGCACCCATCAGAAATGGAGAATTTACCTTACAAGTCCCTGATCCAGACGATGAAGATATCTCTGA ATTTGATTTTCAGCAGCAGGTTGGGGCAGCCTGGGAGGTTTGTGATCGGTTTGACTTACAGACTGATATTTGGCGAGGTC GAATTTTGCGAGCAATTCGCGATCGCGAAAAAAATACGGGCGAAGGTCGAGGCGGTAGCTTTCTCAACTGGTTACAAAAC AACGAAATTAGCAAGAGTCAAGCCTATAGCTGGATAGAATTGGCCAATAGTGCTGATACCCTCTTAGATGCCGGACATTT AGAGCCTGACTCCATCAATAACTTTAGTAAGCGAGCCTTCGTTAAAACAGCCCAGTCTGCTCCCGAGATCCAAGAATTAG TGAGTGAAACAGCCCGCCAAGGGGAGCGAATTACCACTCGTGAAGTTCAACAGCTCTCGGATGAGTGGACAACTATGACC TCAGATTTGGTTCCGGCTGAAATTAAGACTAAGGCGGCCAACCAAACCATTCCCATTCGCCACGTAGCCCCCCTCGTTAA GGAACTGGAAAAATTACCAGAAGCCCATCAGAATACTATTCAATCTGAACTTGCTGCTAGCCCCGATCTAGATACTCTCA AACAAGCCACAGCAGAAGCCAAACAACTCGCCAAATATTTAGAGGCATTTGGCAATGTTCAAGCCCTCACCGAACAATCC ATTGATCTAGAGTCCAGTTTAGAGGAAGCACTCCGGCTAGGCTGTCTCAATATCACAGCAGACTTAGTCAACCAGGCCTC CCAACTAGAGCATATGGTGGCTAAACTCTATACCACCTGGCGCCGACTGCGCCGACTAACGGACAAACTGCATAATGCAT CTGGAGCCAGTACCCCCCATTTACAATCGCTATTACAAGCACTAGAGCGTCTCTATAGCGATGTTTTAGAGGTAGAACTA GGTGCATCTGGCTCTAATCCTTCTGAGACGATTAGTATCCAGGTCCTATCCGAATCCCATGGCTCTGGCTCAGATTAA
Upstream 100 bases:
>100_bases AGCAAGAGAAATCTGACAAAACGGCAAGGAATAACCCATGGCATAATGGGTCGGCAACGAGGTAACGGTGGTTATGGTCA AACGCTCGACAACAGAGGAT
Downstream 100 bases:
>100_bases ACGGTCTAGGAAACTCAGAAAATTCCGAATTTCTCGCTTAGATCGCTTTATTCTGCGAGCATTTTGGATGCCCTGGGTCT TTGCCTTTGGTGCCTTTACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MQDTSAPIRNGEFTLQVPDPDDEDISEFDFQQQVGAAWEVCDRFDLQTDIWRGRILRAIRDREKNTGEGRGGSFLNWLQN NEISKSQAYSWIELANSADTLLDAGHLEPDSINNFSKRAFVKTAQSAPEIQELVSETARQGERITTREVQQLSDEWTTMT SDLVPAEIKTKAANQTIPIRHVAPLVKELEKLPEAHQNTIQSELAASPDLDTLKQATAEAKQLAKYLEAFGNVQALTEQS IDLESSLEEALRLGCLNITADLVNQASQLEHMVAKLYTTWRRLRRLTDKLHNASGASTPHLQSLLQALERLYSDVLEVEL GASGSNPSETISIQVLSESHGSGSD
Sequences:
>Translated_345_residues MQDTSAPIRNGEFTLQVPDPDDEDISEFDFQQQVGAAWEVCDRFDLQTDIWRGRILRAIRDREKNTGEGRGGSFLNWLQN NEISKSQAYSWIELANSADTLLDAGHLEPDSINNFSKRAFVKTAQSAPEIQELVSETARQGERITTREVQQLSDEWTTMT SDLVPAEIKTKAANQTIPIRHVAPLVKELEKLPEAHQNTIQSELAASPDLDTLKQATAEAKQLAKYLEAFGNVQALTEQS IDLESSLEEALRLGCLNITADLVNQASQLEHMVAKLYTTWRRLRRLTDKLHNASGASTPHLQSLLQALERLYSDVLEVEL GASGSNPSETISIQVLSESHGSGSD >Mature_345_residues MQDTSAPIRNGEFTLQVPDPDDEDISEFDFQQQVGAAWEVCDRFDLQTDIWRGRILRAIRDREKNTGEGRGGSFLNWLQN NEISKSQAYSWIELANSADTLLDAGHLEPDSINNFSKRAFVKTAQSAPEIQELVSETARQGERITTREVQQLSDEWTTMT SDLVPAEIKTKAANQTIPIRHVAPLVKELEKLPEAHQNTIQSELAASPDLDTLKQATAEAKQLAKYLEAFGNVQALTEQS IDLESSLEEALRLGCLNITADLVNQASQLEHMVAKLYTTWRRLRRLTDKLHNASGASTPHLQSLLQALERLYSDVLEVEL GASGSNPSETISIQVLSESHGSGSD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38338; Mature: 38338
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDTSAPIRNGEFTLQVPDPDDEDISEFDFQQQVGAAWEVCDRFDLQTDIWRGRILRAIR CCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH DREKNTGEGRGGSFLNWLQNNEISKSQAYSWIELANSADTLLDAGHLEPDSINNFSKRAF HHCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHH VKTAQSAPEIQELVSETARQGERITTREVQQLSDEWTTMTSDLVPAEIKTKAANQTIPIR HHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHH HVAPLVKELEKLPEAHQNTIQSELAASPDLDTLKQATAEAKQLAKYLEAFGNVQALTEQS HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHC IDLESSLEEALRLGCLNITADLVNQASQLEHMVAKLYTTWRRLRRLTDKLHNASGASTPH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH LQSLLQALERLYSDVLEVELGASGSNPSETISIQVLSESHGSGSD HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCC >Mature Secondary Structure MQDTSAPIRNGEFTLQVPDPDDEDISEFDFQQQVGAAWEVCDRFDLQTDIWRGRILRAIR CCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH DREKNTGEGRGGSFLNWLQNNEISKSQAYSWIELANSADTLLDAGHLEPDSINNFSKRAF HHCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHH VKTAQSAPEIQELVSETARQGERITTREVQQLSDEWTTMTSDLVPAEIKTKAANQTIPIR HHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHH HVAPLVKELEKLPEAHQNTIQSELAASPDLDTLKQATAEAKQLAKYLEAFGNVQALTEQS HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHC IDLESSLEEALRLGCLNITADLVNQASQLEHMVAKLYTTWRRLRRLTDKLHNASGASTPH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH LQSLLQALERLYSDVLEVELGASGSNPSETISIQVLSESHGSGSD HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA