| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is yjgQ [C]
Identifier: 158337167
GI number: 158337167
Start: 4088494
End: 4089645
Strand: Reverse
Name: yjgQ [C]
Synonym: AM1_4043
Alternate gene names: 158337167
Gene position: 4089645-4088494 (Counterclockwise)
Preceding gene: 158337168
Following gene: 158337162
Centisome position: 62.88
GC content: 47.48
Gene sequence:
>1152_bases ATGGCTCTGGCTCAGATTAAACGGTCTAGGAAACTCAGAAAATTCCGAATTTCTCGCTTAGATCGCTTTATTCTGCGAGC ATTTTGGATGCCCTGGGTCTTTGCCTTTGGTGCCTTTACAACCATTAGCTTTAGTATTGGTGCTCTGTTTGATACCCTAC GGCGTTTAACAGAAGGGACCTTATCAAGTGTTGATGCATTACAAGTTTTGGTTTTACAGCTCCCTCGCTTTATGGTGCTC GCCCTACCCATGTCGATGCTCCTAGCCCCTTTACTCACCTATAGCCAATTAGCCCGAAAGAACGAGCTCATAGCTCTTAA AGCTTGTGGGACAAGCGTTTACCGTGTCATCCGACCCGCCCTTTGTTTTAGCCTGATTGTCGCTGTTTCCACCCTCACAC TTAACGAGTGGATCGTTCCTCCAGCAACGGCAGCAGTCCATCGGCTGCAAGCGCAGCAAACTGTGAGTCAGATTACAGCG ATTCCTCGCCAAAATATTGTGCATCAAACCTATCACCATCAGCGACTCACTCAACTGTTCCATGCCCGCGCTTTTGATGG TGAAGCACTTCACCAATTGACGATTTTGCAGTTTCAAGATCGTCACCTACATCACATCTGGCTAGCCAAACAAGCTATCT GGGACAGCACGCACCAACAATGGATATTATCCCAGGGGACGCGATATACCATCGATCCAGTCTCAGGGTTATACCAACAA GTTGTTCCCTTTAAAAGGCACCCCTTTCATCAGGTCAGTCCCCAAGAATTAGCCGAAGTTGCACATCAACCTATCAGCCT GCATGAAACTCAGGCACTGATACAGCAGATAAAACAGTCAGGAAATTTACCAACACTGCAACGTTTGCAAGTGCGCTGGC ATGCACTGATGGCTTTTCCCTGGATCGGAGTGGGATTTACGCTGATGGGATCATCATTAGGATGCCAGTCAACCTCAAAG CAAGGTTCATTGGGCTTTGGGTTAAGTAGCCTGCTAATTTTTGGTTACTATACCTTCTCGTTTATCTGTCAGACCTTGGG AGATGCAGGCATCTGGTCAGCTAGCATAGCAGGCTGGCTGCCGATCGTCGTTTTACTCACCATAGGCAGTGCTTTACTTC ACCACAACAATACCTATTCAAAGCGCTTCTGA
Upstream 100 bases:
>100_bases GCACTAGAGCGTCTCTATAGCGATGTTTTAGAGGTAGAACTAGGTGCATCTGGCTCTAATCCTTCTGAGACGATTAGTAT CCAGGTCCTATCCGAATCCC
Downstream 100 bases:
>100_bases ATAGAACCAACACTCTCGACCCTGACTCGTTAAACACGTTTGGGTCAGTCCCCAAACTATTACTATGACTAGCTTAGACA GCAAGTGCTAAGGGTTTAAA
Product: YjgP/YjgQ family membrane protein
Products: NA
Alternate protein names: Permease; Permease YjgP/YjgQ; Permease YjgP/YjgQ Family; Unclassified ABC-Type Transport System Permease; YjgP/YjgQ Family Protein; YjgP/YjgQ Permease Superfamily; YjgP/YjgQ Family Permease; YjgP/YjgQ Permease; YjgP/YjgQ Family Membrane Protein
Number of amino acids: Translated: 383; Mature: 382
Protein sequence:
>383_residues MALAQIKRSRKLRKFRISRLDRFILRAFWMPWVFAFGAFTTISFSIGALFDTLRRLTEGTLSSVDALQVLVLQLPRFMVL ALPMSMLLAPLLTYSQLARKNELIALKACGTSVYRVIRPALCFSLIVAVSTLTLNEWIVPPATAAVHRLQAQQTVSQITA IPRQNIVHQTYHHQRLTQLFHARAFDGEALHQLTILQFQDRHLHHIWLAKQAIWDSTHQQWILSQGTRYTIDPVSGLYQQ VVPFKRHPFHQVSPQELAEVAHQPISLHETQALIQQIKQSGNLPTLQRLQVRWHALMAFPWIGVGFTLMGSSLGCQSTSK QGSLGFGLSSLLIFGYYTFSFICQTLGDAGIWSASIAGWLPIVVLLTIGSALLHHNNTYSKRF
Sequences:
>Translated_383_residues MALAQIKRSRKLRKFRISRLDRFILRAFWMPWVFAFGAFTTISFSIGALFDTLRRLTEGTLSSVDALQVLVLQLPRFMVL ALPMSMLLAPLLTYSQLARKNELIALKACGTSVYRVIRPALCFSLIVAVSTLTLNEWIVPPATAAVHRLQAQQTVSQITA IPRQNIVHQTYHHQRLTQLFHARAFDGEALHQLTILQFQDRHLHHIWLAKQAIWDSTHQQWILSQGTRYTIDPVSGLYQQ VVPFKRHPFHQVSPQELAEVAHQPISLHETQALIQQIKQSGNLPTLQRLQVRWHALMAFPWIGVGFTLMGSSLGCQSTSK QGSLGFGLSSLLIFGYYTFSFICQTLGDAGIWSASIAGWLPIVVLLTIGSALLHHNNTYSKRF >Mature_382_residues ALAQIKRSRKLRKFRISRLDRFILRAFWMPWVFAFGAFTTISFSIGALFDTLRRLTEGTLSSVDALQVLVLQLPRFMVLA LPMSMLLAPLLTYSQLARKNELIALKACGTSVYRVIRPALCFSLIVAVSTLTLNEWIVPPATAAVHRLQAQQTVSQITAI PRQNIVHQTYHHQRLTQLFHARAFDGEALHQLTILQFQDRHLHHIWLAKQAIWDSTHQQWILSQGTRYTIDPVSGLYQQV VPFKRHPFHQVSPQELAEVAHQPISLHETQALIQQIKQSGNLPTLQRLQVRWHALMAFPWIGVGFTLMGSSLGCQSTSKQ GSLGFGLSSLLIFGYYTFSFICQTLGDAGIWSASIAGWLPIVVLLTIGSALLHHNNTYSKRF
Specific function: Unknown
COG id: COG0795
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43326; Mature: 43195
Theoretical pI: Translated: 10.90; Mature: 10.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALAQIKRSRKLRKFRISRLDRFILRAFWMPWVFAFGAFTTISFSIGALFDTLRRLTEGT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSSVDALQVLVLQLPRFMVLALPMSMLLAPLLTYSQLARKNELIALKACGTSVYRVIRPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHH LCFSLIVAVSTLTLNEWIVPPATAAVHRLQAQQTVSQITAIPRQNIVHQTYHHQRLTQLF HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HARAFDGEALHQLTILQFQDRHLHHIWLAKQAIWDSTHQQWILSQGTRYTIDPVSGLYQQ HHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHH VVPFKRHPFHQVSPQELAEVAHQPISLHETQALIQQIKQSGNLPTLQRLQVRWHALMAFP HCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH WIGVGFTLMGSSLGCQSTSKQGSLGFGLSSLLIFGYYTFSFICQTLGDAGIWSASIAGWL HHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH PIVVLLTIGSALLHHNNTYSKRF HHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure ALAQIKRSRKLRKFRISRLDRFILRAFWMPWVFAFGAFTTISFSIGALFDTLRRLTEGT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSSVDALQVLVLQLPRFMVLALPMSMLLAPLLTYSQLARKNELIALKACGTSVYRVIRPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHH LCFSLIVAVSTLTLNEWIVPPATAAVHRLQAQQTVSQITAIPRQNIVHQTYHHQRLTQLF HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HARAFDGEALHQLTILQFQDRHLHHIWLAKQAIWDSTHQQWILSQGTRYTIDPVSGLYQQ HHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHH VVPFKRHPFHQVSPQELAEVAHQPISLHETQALIQQIKQSGNLPTLQRLQVRWHALMAFP HCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH WIGVGFTLMGSSLGCQSTSKQGSLGFGLSSLLIFGYYTFSFICQTLGDAGIWSASIAGWL HHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH PIVVLLTIGSALLHHNNTYSKRF HHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA