Click here to switch to the map view.

The map label for this gene is 158337081

Identifier: 158337081

GI number: 158337081

Start: 4006008

End: 4006526

Strand: Reverse

Name: 158337081

Synonym: AM1_3954

Alternate gene names: NA

Gene position: 4006526-4006008 (Counterclockwise)

Preceding gene: 158337084

Following gene: 158337080

Centisome position: 61.6

GC content: 49.71

Gene sequence:

>519_bases
ATGCCTTCCCCTGCCGCACCTCGTCCCAATCGTCAGTCCCGCAACCTCCAAGTGGGGGAGTGGGGTGAACAACTGGTCTG
TCAATGGCTGACCCAGCAACAGTGGCACATTCTTGACAGACGCTGGCATTGTCGATGGGGTGAAATCGATATTATCGCCA
GATCCAACCCTCCCCTTCCTGGCCAAGATAGCAATACGCGCCTAGCTTTCGTAGAAGTTAAAACCCGTCGGGCTCAAAAT
TGGGATGCGGATGGTCTCTTGGCGATCACCCCCCAGAAACAACAGAAGCTATGGAAAACCGCTCAACTTTACTTGAAAAA
GCACCCGGAATTAGCGGAGCTATTCTGTCAATTCGATGTGGCGCTAGTACAGTGCAACTTAAACTCAAACTCGCCCTCCA
AGACAGTCCATGTGCAGGACGACTTACAAGTCACTACCGTAGAGATCAACCAGCCTATTCATGTGAGAGGCTATCAATTC
ATGTTGTTGGACTATATAGAATCTGCATTTACGTTGTAA

Upstream 100 bases:

>100_bases
TATTGTTGGTTAAGTCAGGGGATTAACGACGCGATCAAGGATGATAAAGCCGATAGTGCATATATTGATCCTATCGAACT
CTTGGCTGCTTGAAAGAAAT

Downstream 100 bases:

>100_bases
CGGCAAGAAACCCCTGCGTCTCAAACCATATGGGGTTGGTCATGAGACTACACAGCGGTTGCACTGTGTACTGCTCTCTT
GGGTGAGAGCTAATAACGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MPSPAAPRPNRQSRNLQVGEWGEQLVCQWLTQQQWHILDRRWHCRWGEIDIIARSNPPLPGQDSNTRLAFVEVKTRRAQN
WDADGLLAITPQKQQKLWKTAQLYLKKHPELAELFCQFDVALVQCNLNSNSPSKTVHVQDDLQVTTVEINQPIHVRGYQF
MLLDYIESAFTL

Sequences:

>Translated_172_residues
MPSPAAPRPNRQSRNLQVGEWGEQLVCQWLTQQQWHILDRRWHCRWGEIDIIARSNPPLPGQDSNTRLAFVEVKTRRAQN
WDADGLLAITPQKQQKLWKTAQLYLKKHPELAELFCQFDVALVQCNLNSNSPSKTVHVQDDLQVTTVEINQPIHVRGYQF
MLLDYIESAFTL
>Mature_171_residues
PSPAAPRPNRQSRNLQVGEWGEQLVCQWLTQQQWHILDRRWHCRWGEIDIIARSNPPLPGQDSNTRLAFVEVKTRRAQNW
DADGLLAITPQKQQKLWKTAQLYLKKHPELAELFCQFDVALVQCNLNSNSPSKTVHVQDDLQVTTVEINQPIHVRGYQFM
LLDYIESAFTL

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3954_ACAM1 (B0C8B9)

Other databases:

- EMBL:   CP000828
- RefSeq:   YP_001518256.1
- ProteinModelPortal:   B0C8B9
- GeneID:   5682758
- GenomeReviews:   CP000828_GR
- KEGG:   amr:AM1_3954
- HOGENOM:   HBG710155
- OMA:   WDQDGLL
- ProtClustDB:   PRK12497
- BioCyc:   AMAR329726:AM1_3954-MONOMER
- HAMAP:   MF_00048
- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509
- Gene3D:   G3DSA:3.40.1350.10
- TIGRFAMs:   TIGR00252

Pfam domain/function: PF02021 UPF0102; SSF52980 Restrict_endonuc_II-like_core

EC number: NA

Molecular weight: Translated: 19998; Mature: 19867

Theoretical pI: Translated: 7.98; Mature: 7.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSPAAPRPNRQSRNLQVGEWGEQLVCQWLTQQQWHILDRRWHCRWGEIDIIARSNPPLP
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEECCCCCCEEEEECCCCCCC
GQDSNTRLAFVEVKTRRAQNWDADGLLAITPQKQQKLWKTAQLYLKKHPELAELFCQFDV
CCCCCCEEEEEEEEECCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHCE
ALVQCNLNSNSPSKTVHVQDDLQVTTVEINQPIHVRGYQFMLLDYIESAFTL
EEEEEECCCCCCCCEEEEECCCEEEEEEECCCEEECCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
PSPAAPRPNRQSRNLQVGEWGEQLVCQWLTQQQWHILDRRWHCRWGEIDIIARSNPPLP
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEECCCCCCEEEEECCCCCCC
GQDSNTRLAFVEVKTRRAQNWDADGLLAITPQKQQKLWKTAQLYLKKHPELAELFCQFDV
CCCCCCEEEEEEEEECCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHCE
ALVQCNLNSNSPSKTVHVQDDLQVTTVEINQPIHVRGYQFMLLDYIESAFTL
EEEEEECCCCCCCCEEEEECCCEEEEEEECCCEEECCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA