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The map label for this gene is 158337080

Identifier: 158337080

GI number: 158337080

Start: 4004424

End: 4005659

Strand: Reverse

Name: 158337080

Synonym: AM1_3953

Alternate gene names: NA

Gene position: 4005659-4004424 (Counterclockwise)

Preceding gene: 158337081

Following gene: 158337079

Centisome position: 61.59

GC content: 52.59

Gene sequence:

>1236_bases
ATGTCTCCAGATCAATTGCCTTTAGAACAGATGACTTTGCGTCAACTTCGTCGTGTCGCCAGCCGTTATGGGGTGTCACG
TTACAGCCGCATGCGCAAAGACCAGTTGCTCGAGTCCATTCGCGTCGCCCAGCAAAACGCATCCGTGCCTTCCACCATGA
ATCACCAAGCTAGCCCTGAATTTTCTGGGGCTGTGACGGATCAGGAACGGGTAGAAGCTGCAAAATTTGAAGTGGGGCAA
GAAGGCGCTGTGGAGTTAGCATCTGTTGATACCGAAATAAATGACCTACCCGAGGGCTACGGTGAAACTCGGATTGTCCT
GATGCCTAGGGATCCTCAATGGGCTTATACCTACTGGGATATTCCCCATGACCATAAGGTAATTTTGCGCAATCAGGGCG
GACAACAGCTCGCATTACGTCTCTACGATGCCACGGATATTGACTTGGCTTACCAAGTCCCTCACAGTGTGCAGGAATAT
CCCTGTGATGAGTTAGCCCGGGAATGGTACCTCCCCCTACCTGTGAGCGATCGCGATTACGTCATCGAAATTGGCTATCG
CTGTGCCGATGGTCGCTGGTTAGTCTTAGCCCGCTCTGTACCAGTACATGTTCCCCCCACCTATCCTTCCGATTGGGTTG
AAGATCAGTTCGTGACGGTCGATTGGGATATGGACCTACGGGGCAAGCAGATTGCAACTCTCGTGCCCCCAGAGAAGAAG
CCTGTGGCTCCTGCTCCTGACAACAGCATTTATGATCAGGTCTTCGGTATGGCCGAGGGCGTCGAAGCATTACGAGTTGC
GGGTTCTCTGTATGGCTCCATGCAGCATGCTCCCGCTCATGAGTCGACCCTGAGCTCCTATGTCTTTCCTTCTGGAGTCG
GTCTCTGGGCCATCCCAACGGCTTCTGGCGTTAACATGTCTGGAGTCGGCTTCTCGGCATCCGCACCGCCCATACGGCCT
CGCCAGTTCTGGTTAGTGGCTGATGCAGAGCTAATTGTCTACGGTGCCACTGAACCCGATGCAACGGTCACTATTGGCGG
TCAGCCCATCCAGCTCAATCCCGATGGAACATTCCGATTCCAAATGTCTTTCCAAGATGGTCTAATTGATTACCCAATCA
TGGCTGTTGCTGCGGATGGTGAGCAAAATCGCTCTATCCACATGAAGTTCACTCGGGAAACTCCTGAGCGCCGTACGAAC
ACCAAGGAAGAAGCTGTTTTGGAATGGTTAGTTTAA

Upstream 100 bases:

>100_bases
ATTTGTTAACAAAGCGATCCCCAACTAGTTATATTTACTCAAGGTTAACTATGGTTTGGCGCTCTCAACTCGTTCGTTAC
CCTTAGAGGTCTCTGCTGAT

Downstream 100 bases:

>100_bases
TCCTCTCTTGTCTTAAAACTTAACCTCTTCTGATGCGAGGCGAGCAAGATATCTTGCTCGCCTCGTTTTTATCCTTAACA
GACGAATATAGTGGTCACAA

Product: Rho termination factor domain-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 411; Mature: 410

Protein sequence:

>411_residues
MSPDQLPLEQMTLRQLRRVASRYGVSRYSRMRKDQLLESIRVAQQNASVPSTMNHQASPEFSGAVTDQERVEAAKFEVGQ
EGAVELASVDTEINDLPEGYGETRIVLMPRDPQWAYTYWDIPHDHKVILRNQGGQQLALRLYDATDIDLAYQVPHSVQEY
PCDELAREWYLPLPVSDRDYVIEIGYRCADGRWLVLARSVPVHVPPTYPSDWVEDQFVTVDWDMDLRGKQIATLVPPEKK
PVAPAPDNSIYDQVFGMAEGVEALRVAGSLYGSMQHAPAHESTLSSYVFPSGVGLWAIPTASGVNMSGVGFSASAPPIRP
RQFWLVADAELIVYGATEPDATVTIGGQPIQLNPDGTFRFQMSFQDGLIDYPIMAVAADGEQNRSIHMKFTRETPERRTN
TKEEAVLEWLV

Sequences:

>Translated_411_residues
MSPDQLPLEQMTLRQLRRVASRYGVSRYSRMRKDQLLESIRVAQQNASVPSTMNHQASPEFSGAVTDQERVEAAKFEVGQ
EGAVELASVDTEINDLPEGYGETRIVLMPRDPQWAYTYWDIPHDHKVILRNQGGQQLALRLYDATDIDLAYQVPHSVQEY
PCDELAREWYLPLPVSDRDYVIEIGYRCADGRWLVLARSVPVHVPPTYPSDWVEDQFVTVDWDMDLRGKQIATLVPPEKK
PVAPAPDNSIYDQVFGMAEGVEALRVAGSLYGSMQHAPAHESTLSSYVFPSGVGLWAIPTASGVNMSGVGFSASAPPIRP
RQFWLVADAELIVYGATEPDATVTIGGQPIQLNPDGTFRFQMSFQDGLIDYPIMAVAADGEQNRSIHMKFTRETPERRTN
TKEEAVLEWLV
>Mature_410_residues
SPDQLPLEQMTLRQLRRVASRYGVSRYSRMRKDQLLESIRVAQQNASVPSTMNHQASPEFSGAVTDQERVEAAKFEVGQE
GAVELASVDTEINDLPEGYGETRIVLMPRDPQWAYTYWDIPHDHKVILRNQGGQQLALRLYDATDIDLAYQVPHSVQEYP
CDELAREWYLPLPVSDRDYVIEIGYRCADGRWLVLARSVPVHVPPTYPSDWVEDQFVTVDWDMDLRGKQIATLVPPEKKP
VAPAPDNSIYDQVFGMAEGVEALRVAGSLYGSMQHAPAHESTLSSYVFPSGVGLWAIPTASGVNMSGVGFSASAPPIRPR
QFWLVADAELIVYGATEPDATVTIGGQPIQLNPDGTFRFQMSFQDGLIDYPIMAVAADGEQNRSIHMKFTRETPERRTNT
KEEAVLEWLV

Specific function: Unknown

COG id: COG3330

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46011; Mature: 45880

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPDQLPLEQMTLRQLRRVASRYGVSRYSRMRKDQLLESIRVAQQNASVPSTMNHQASPE
CCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
FSGAVTDQERVEAAKFEVGQEGAVELASVDTEINDLPEGYGETRIVLMPRDPQWAYTYWD
CCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCHHHCCCCCCCEEEEEEECCCCEEEEEEC
IPHDHKVILRNQGGQQLALRLYDATDIDLAYQVPHSVQEYPCDELAREWYLPLPVSDRDY
CCCCCEEEEECCCCCEEEEEEECCCCCEEEEECCCCHHHCCHHHHHHHCCCCCCCCCCCE
VIEIGYRCADGRWLVLARSVPVHVPPTYPSDWVEDQFVTVDWDMDLRGKQIATLVPPEKK
EEEEEEEECCCEEEEEEECCCEECCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCC
PVAPAPDNSIYDQVFGMAEGVEALRVAGSLYGSMQHAPAHESTLSSYVFPSGVGLWAIPT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCEEEECC
ASGVNMSGVGFSASAPPIRPRQFWLVADAELIVYGATEPDATVTIGGQPIQLNPDGTFRF
CCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEECCCCCCEEEECCEEEEECCCCEEEE
QMSFQDGLIDYPIMAVAADGEQNRSIHMKFTRETPERRTNTKEEAVLEWLV
EEECCCCCCCCCEEEEEECCCCCCEEEEEECCCCCHHHCCCHHHHHHHHCC
>Mature Secondary Structure 
SPDQLPLEQMTLRQLRRVASRYGVSRYSRMRKDQLLESIRVAQQNASVPSTMNHQASPE
CCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
FSGAVTDQERVEAAKFEVGQEGAVELASVDTEINDLPEGYGETRIVLMPRDPQWAYTYWD
CCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCHHHCCCCCCCEEEEEEECCCCEEEEEEC
IPHDHKVILRNQGGQQLALRLYDATDIDLAYQVPHSVQEYPCDELAREWYLPLPVSDRDY
CCCCCEEEEECCCCCEEEEEEECCCCCEEEEECCCCHHHCCHHHHHHHCCCCCCCCCCCE
VIEIGYRCADGRWLVLARSVPVHVPPTYPSDWVEDQFVTVDWDMDLRGKQIATLVPPEKK
EEEEEEEECCCEEEEEEECCCEECCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCC
PVAPAPDNSIYDQVFGMAEGVEALRVAGSLYGSMQHAPAHESTLSSYVFPSGVGLWAIPT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCEEEECC
ASGVNMSGVGFSASAPPIRPRQFWLVADAELIVYGATEPDATVTIGGQPIQLNPDGTFRF
CCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEECCCCCCEEEECCEEEEECCCCEEEE
QMSFQDGLIDYPIMAVAADGEQNRSIHMKFTRETPERRTNTKEEAVLEWLV
EEECCCCCCCCCEEEEEECCCCCCEEEEEECCCCCHHHCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA