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The map label for this gene is ftsY [H]

Identifier: 158336916

GI number: 158336916

Start: 3841366

End: 3842871

Strand: Direct

Name: ftsY [H]

Synonym: AM1_3787

Alternate gene names: 158336916

Gene position: 3841366-3842871 (Clockwise)

Preceding gene: 158336915

Following gene: 158336917

Centisome position: 59.06

GC content: 52.39

Gene sequence:

>1506_bases
ATGGTTTTTAATTGGTTTCGTCGCCAATTTAATAAGGAAGAAGCTGAGGAGCAAGATACACCACCTGCAGTGGAAGCGGA
GCAAGATGCCCCCAGCGACGACAGTGAAGATAGCGACGATGCCGAAGAGACCAGTGAAGCTGAAGATTATCGCAGTTGGG
CCGAGACAGCCTTCCAAAAGATCCAAGAGCGACAGCAAGAAACTACTGCTGAGACCGTTGCACCAGCCGTCGATGCTAAA
AGTACCTCAACAGATGAAGTAATCGTTTCCCCAGACGTCGAGGTAGAGAGCTCCGCAGTAGCTGAGGTCACCCCAGAAGC
TGACCCTGAGCCTTCTCCAGAGGCCACCTCCACCACGGCTGAAATCGAGGAAATTGATGCAGTCGCACCCGAGGTTGCCT
CTTCTCCTGAGCCGATTGCAGCAACTCCAGCACCGGTTGCAAAAACTGAATCGCCTAGCCAAACCTCCCCTCCCGCCAAA
CCTTCTCCCTCAGATCTGCAGTTTGATGAAGGGTTTTTATGGTCTGCGGAAGTATTAGCAGCCCAGGGCCGTCGTCCTGA
AGAAGTCTCCGTTGAAGAGATTTCCTGGCTGCAAAAGCTGCGCCAAGGACTAGGCAAAACACGACGGGGTTTAGCCAACC
AACTCAAATCGGTGGTAGGCCAAGGCCCGTTGAATGCCGATGCGGTGATGGCAATTGAGTCATTATTGCTGCAGGCAGAT
GTGGGGATTTCGGCGACAGATAAATTAATCGAAGCCTTGCAGACCAAAGTTCGGGAAGAAACCCTGCCCCCGGATGCTGC
GATCGCATATCTCAAAGAGATTATGCAGGATATCCTCGATGCCCCAACCCAAAAGAACTACAGTCCTAACTTTGCCCCCA
AACGGGAGGGAATGAATATCTGGTTAATGACCGGGGTCAACGGCGCCGGTAAAACCACGACTATCGGCAAACTAGCTCAT
ATTTCTAAGGAGTCGGGGTACGACTGTCTGATTGCAGCTGCCGACACCTTCAGAGCTGCAGCCGTCGAACAAGTAAAGGT
GTGGGGACAGCGTAGCAATGTCGATGTGATTGCGAATCCTGGTCAAAATACAGACCCTGCTGCTGTCGTCTTCGATGCCA
TTACTGCCGCCCAAAAGCGCAATATTGATCTGTTGCTGGTGGACACAGCCGGGCGCCTCCAGAATAAGAAGAACCTGATG
GATGAACTCAACAAAGTTCGACGGATTGTCAGCAAGAAAGCCCCAGATGCTCATATCGAGTCCCTGTTGGTGCTGGATGC
CACTTTGGGCCAAAACGGGTTGCGACAAGCCCAGGTCTTTTCCGAGGCGGCTGAATTAACGGGAGTCGTACTGACCAAAC
TGGATGGCTCTGCTAAAGGTGGGGTTGCTCTAGCGGTGGTTCAGGAGTTAGGTCTGCCCATTCGATTTATAGGTGCAGGC
GAAGGCATTACGGACTTGCGCCCCTTTTCTAGCTATGAATTTGTCGAGGCACTCCTGAGCACCTAG

Upstream 100 bases:

>100_bases
TAATGGTGTTTTGCGGCGGGTAACCCGTCAGATCGCGGTACCTTAATATGCGGTAGGTTGAAATCAAATCCGCCCCCATC
GTTTCGTTTAGGAAAAGGTC

Downstream 100 bases:

>100_bases
TCTTTTTTGATCTATAAAAAAAATGCTTCATAGTTTCATTGCCCCATCTTGATGCCAGAGCTCCTTCAAAAATGGTTGGC
AATCTCACCAGAAGTGCGCT

Product: signal recognition particle GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 501; Mature: 501

Protein sequence:

>501_residues
MVFNWFRRQFNKEEAEEQDTPPAVEAEQDAPSDDSEDSDDAEETSEAEDYRSWAETAFQKIQERQQETTAETVAPAVDAK
STSTDEVIVSPDVEVESSAVAEVTPEADPEPSPEATSTTAEIEEIDAVAPEVASSPEPIAATPAPVAKTESPSQTSPPAK
PSPSDLQFDEGFLWSAEVLAAQGRRPEEVSVEEISWLQKLRQGLGKTRRGLANQLKSVVGQGPLNADAVMAIESLLLQAD
VGISATDKLIEALQTKVREETLPPDAAIAYLKEIMQDILDAPTQKNYSPNFAPKREGMNIWLMTGVNGAGKTTTIGKLAH
ISKESGYDCLIAAADTFRAAAVEQVKVWGQRSNVDVIANPGQNTDPAAVVFDAITAAQKRNIDLLLVDTAGRLQNKKNLM
DELNKVRRIVSKKAPDAHIESLLVLDATLGQNGLRQAQVFSEAAELTGVVLTKLDGSAKGGVALAVVQELGLPIRFIGAG
EGITDLRPFSSYEFVEALLST

Sequences:

>Translated_501_residues
MVFNWFRRQFNKEEAEEQDTPPAVEAEQDAPSDDSEDSDDAEETSEAEDYRSWAETAFQKIQERQQETTAETVAPAVDAK
STSTDEVIVSPDVEVESSAVAEVTPEADPEPSPEATSTTAEIEEIDAVAPEVASSPEPIAATPAPVAKTESPSQTSPPAK
PSPSDLQFDEGFLWSAEVLAAQGRRPEEVSVEEISWLQKLRQGLGKTRRGLANQLKSVVGQGPLNADAVMAIESLLLQAD
VGISATDKLIEALQTKVREETLPPDAAIAYLKEIMQDILDAPTQKNYSPNFAPKREGMNIWLMTGVNGAGKTTTIGKLAH
ISKESGYDCLIAAADTFRAAAVEQVKVWGQRSNVDVIANPGQNTDPAAVVFDAITAAQKRNIDLLLVDTAGRLQNKKNLM
DELNKVRRIVSKKAPDAHIESLLVLDATLGQNGLRQAQVFSEAAELTGVVLTKLDGSAKGGVALAVVQELGLPIRFIGAG
EGITDLRPFSSYEFVEALLST
>Mature_501_residues
MVFNWFRRQFNKEEAEEQDTPPAVEAEQDAPSDDSEDSDDAEETSEAEDYRSWAETAFQKIQERQQETTAETVAPAVDAK
STSTDEVIVSPDVEVESSAVAEVTPEADPEPSPEATSTTAEIEEIDAVAPEVASSPEPIAATPAPVAKTESPSQTSPPAK
PSPSDLQFDEGFLWSAEVLAAQGRRPEEVSVEEISWLQKLRQGLGKTRRGLANQLKSVVGQGPLNADAVMAIESLLLQAD
VGISATDKLIEALQTKVREETLPPDAAIAYLKEIMQDILDAPTQKNYSPNFAPKREGMNIWLMTGVNGAGKTTTIGKLAH
ISKESGYDCLIAAADTFRAAAVEQVKVWGQRSNVDVIANPGQNTDPAAVVFDAITAAQKRNIDLLLVDTAGRLQNKKNLM
DELNKVRRIVSKKAPDAHIESLLVLDATLGQNGLRQAQVFSEAAELTGVVLTKLDGSAKGGVALAVVQELGLPIRFIGAG
EGITDLRPFSSYEFVEALLST

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=298, Percent_Identity=30.5369127516779, Blast_Score=129, Evalue=6e-30,
Organism=Homo sapiens, GI226371618, Length=208, Percent_Identity=33.6538461538462, Blast_Score=125, Evalue=7e-29,
Organism=Homo sapiens, GI295424842, Length=252, Percent_Identity=32.1428571428571, Blast_Score=107, Evalue=3e-23,
Organism=Homo sapiens, GI23308697, Length=252, Percent_Identity=32.1428571428571, Blast_Score=107, Evalue=4e-23,
Organism=Homo sapiens, GI89061728, Length=136, Percent_Identity=35.2941176470588, Blast_Score=88, Evalue=2e-17,
Organism=Escherichia coli, GI1789874, Length=328, Percent_Identity=45.4268292682927, Blast_Score=256, Evalue=3e-69,
Organism=Escherichia coli, GI1788963, Length=290, Percent_Identity=34.1379310344828, Blast_Score=144, Evalue=9e-36,
Organism=Caenorhabditis elegans, GI17539958, Length=304, Percent_Identity=28.2894736842105, Blast_Score=126, Evalue=3e-29,
Organism=Caenorhabditis elegans, GI193206261, Length=279, Percent_Identity=31.5412186379928, Blast_Score=111, Evalue=8e-25,
Organism=Saccharomyces cerevisiae, GI6325345, Length=276, Percent_Identity=31.8840579710145, Blast_Score=146, Evalue=8e-36,
Organism=Saccharomyces cerevisiae, GI6320498, Length=274, Percent_Identity=28.8321167883212, Blast_Score=91, Evalue=4e-19,
Organism=Drosophila melanogaster, GI17647949, Length=290, Percent_Identity=34.1379310344828, Blast_Score=132, Evalue=8e-31,
Organism=Drosophila melanogaster, GI24641198, Length=221, Percent_Identity=31.2217194570136, Blast_Score=101, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 53817; Mature: 53817

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFNWFRRQFNKEEAEEQDTPPAVEAEQDAPSDDSEDSDDAEETSEAEDYRSWAETAFQK
CCCHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
IQERQQETTAETVAPAVDAKSTSTDEVIVSPDVEVESSAVAEVTPEADPEPSPEATSTTA
HHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCHH
EIEEIDAVAPEVASSPEPIAATPAPVAKTESPSQTSPPAKPSPSDLQFDEGFLWSAEVLA
HHHHHHHHCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
AQGRRPEEVSVEEISWLQKLRQGLGKTRRGLANQLKSVVGQGPLNADAVMAIESLLLQAD
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHC
VGISATDKLIEALQTKVREETLPPDAAIAYLKEIMQDILDAPTQKNYSPNFAPKREGMNI
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEE
WLMTGVNGAGKTTTIGKLAHISKESGYDCLIAAADTFRAAAVEQVKVWGQRSNVDVIANP
EEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCEEEECC
GQNTDPAAVVFDAITAAQKRNIDLLLVDTAGRLQNKKNLMDELNKVRRIVSKKAPDAHIE
CCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
SLLVLDATLGQNGLRQAQVFSEAAELTGVVLTKLDGSAKGGVALAVVQELGLPIRFIGAG
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHCCCEEEEECC
EGITDLRPFSSYEFVEALLST
CCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MVFNWFRRQFNKEEAEEQDTPPAVEAEQDAPSDDSEDSDDAEETSEAEDYRSWAETAFQK
CCCHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
IQERQQETTAETVAPAVDAKSTSTDEVIVSPDVEVESSAVAEVTPEADPEPSPEATSTTA
HHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCHH
EIEEIDAVAPEVASSPEPIAATPAPVAKTESPSQTSPPAKPSPSDLQFDEGFLWSAEVLA
HHHHHHHHCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
AQGRRPEEVSVEEISWLQKLRQGLGKTRRGLANQLKSVVGQGPLNADAVMAIESLLLQAD
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHC
VGISATDKLIEALQTKVREETLPPDAAIAYLKEIMQDILDAPTQKNYSPNFAPKREGMNI
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEE
WLMTGVNGAGKTTTIGKLAHISKESGYDCLIAAADTFRAAAVEQVKVWGQRSNVDVIANP
EEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCEEEECC
GQNTDPAAVVFDAITAAQKRNIDLLLVDTAGRLQNKKNLMDELNKVRRIVSKKAPDAHIE
CCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
SLLVLDATLGQNGLRQAQVFSEAAELTGVVLTKLDGSAKGGVALAVVQELGLPIRFIGAG
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHCCCEEEEECC
EGITDLRPFSSYEFVEALLST
CCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]