| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158336889
Identifier: 158336889
GI number: 158336889
Start: 3817108
End: 3817458
Strand: Reverse
Name: 158336889
Synonym: AM1_3757
Alternate gene names: NA
Gene position: 3817458-3817108 (Counterclockwise)
Preceding gene: 158336891
Following gene: 158336888
Centisome position: 58.7
GC content: 39.32
Gene sequence:
>351_bases ATGCCTCGCAAGCAACTCGGGAAAAAAGATCAGCTAATTATTAATATTGCAGCCCAAAAAATTGGCAGACGAATGAAGCA GCTACGGGCTCATTTAGGGTTGTCCCAAGTTCAAATCGCCAAGAATCTTTCTATCTCTGTCAGACAATGGTCTGGCTGTG AGTGCGGTGATTATTTGCTAAATATAGATTTTTTAATTTTGCTCAACACCTATTATCAGGTGTCCATCGATTGGCTATTG ACGGGTAAAGGCAATATGTTTATGGATGATACTAGTGAGACTGAGCAAAAAATTACCAGTCAAGAATTAGCTGAAGAGCT AAAAGTTCTGATCACGCGTTTAGAAGACTAA
Upstream 100 bases:
>100_bases TGATCACCCTTTTTTTCGGTTGCATTTAGGATTAGATGACTACAATTTGAGTCCTTTTGAATATCTTCAATAATCATCAA AACTAATCTGCCACTCTGCT
Downstream 100 bases:
>100_bases ACGGCTTCTGCCTGAACTCCTAGACTTACTGCCCAGTCCGATGATCGAAGTATCTTGATTTGAGTATTCTGCTTACTCTA GTAGCAGAGACTGAAGTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MPRKQLGKKDQLIINIAAQKIGRRMKQLRAHLGLSQVQIAKNLSISVRQWSGCECGDYLLNIDFLILLNTYYQVSIDWLL TGKGNMFMDDTSETEQKITSQELAEELKVLITRLED
Sequences:
>Translated_116_residues MPRKQLGKKDQLIINIAAQKIGRRMKQLRAHLGLSQVQIAKNLSISVRQWSGCECGDYLLNIDFLILLNTYYQVSIDWLL TGKGNMFMDDTSETEQKITSQELAEELKVLITRLED >Mature_115_residues PRKQLGKKDQLIINIAAQKIGRRMKQLRAHLGLSQVQIAKNLSISVRQWSGCECGDYLLNIDFLILLNTYYQVSIDWLLT GKGNMFMDDTSETEQKITSQELAEELKVLITRLED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13328; Mature: 13197
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRKQLGKKDQLIINIAAQKIGRRMKQLRAHLGLSQVQIAKNLSISVRQWSGCECGDYLL CCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHCCEEEEECCCCCCCCHHHH NIDFLILLNTYYQVSIDWLLTGKGNMFMDDTSETEQKITSQELAEELKVLITRLED HHHHHHEEHHHEEEEEEEEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PRKQLGKKDQLIINIAAQKIGRRMKQLRAHLGLSQVQIAKNLSISVRQWSGCECGDYLL CCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHCCEEEEECCCCCCCCHHHH NIDFLILLNTYYQVSIDWLLTGKGNMFMDDTSETEQKITSQELAEELKVLITRLED HHHHHHEEHHHEEEEEEEEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA