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The map label for this gene is epsC [H]

Identifier: 158336758

GI number: 158336758

Start: 3683071

End: 3684909

Strand: Reverse

Name: epsC [H]

Synonym: AM1_3626

Alternate gene names: 158336758

Gene position: 3684909-3683071 (Counterclockwise)

Preceding gene: 158336759

Following gene: 158336757

Centisome position: 56.66

GC content: 44.43

Gene sequence:

>1839_bases
TTGAGCTTGCGCTTAGATAGTGCGCTGGGATTTATCCTGACTTTCGAACGATACCAAGCTGACTTATTGCTAGCCACCTT
GCTATTTATGGTGATTAAACTCACTGTTTTCCTGTCAGGTGGTTTTTATAAGCACTACTGGCGTTATGCAAGCATTGATG
AGTTGAGCAATGTTGCTGTGCTCACAGGCTCATCAGTTATTTTGCAAACTTTAGCATTTGCAGTGCTAAAATCCCTTTCC
ATTTTGTCCTTGCCACGATCCTTGCCGTTTTTGGATGGTCTGCTCACACTACTCATTATTGGCGGTATTCGGTTTAGTGT
TCGGGCAATAGAACGGAGAAAGCGTCAACTTGAAACCTCTGAACGCAGAGACTTAAGGAAAAGAGCATTAGTTGTAGGGG
CAGGTAATGCAGGTGTTGCTCTTGTACAAGAGCTGGAACGGAGTCCCCATATTGGTTTACTGCCTATCGCTTTTGTCGAT
GACAACCCTGCAAAATTAAATTTGCGCATCCGGGGATTACCCGTCGTTGGTAATCGGAATGTCATTCCAGATACGATTAA
ATCTTGGCATATTCAGACCGTGATTATTGCCATGCCTTCTTTATCAGGCCAGAGCCTACGAGATATTGTTGCACTATGTC
AAATGACTGGCGTTGAGACCTTAACCTTACCAGCGTTACAAGATGTCTTAGTCGGTCAGCAAGATTTACAAAACAGCATT
CGGGAAGTGCAGATTGAAGATCTGCTTCGTCGTGAACCTATCCAGACAGATATACAAGGTGTTCGTCAGCTTCTTAAAGG
CCGCCGGGTATTGGTGACTGGAGCTGGTGGATCGATTGGTAGCGAACTCTGTCGACAAATCTTTCGTTGTGCACCAGCAG
AACTTATTCTGCTGGGTCATGGAGAAAACTCTGTATTCCAGATACAACAAGAACTTCTCCAATATCAGAATCATAATGGT
GTTGCCAGTTCTGATGTATCCGTTCCTATACTTAGACCTTTCATTGCAGATCTAAGACATCCCTCTCGCTTACGGTTTGC
CTTTGAAGAGTACCAACCAGAAGTCGTATTCCATGCAGCAGCCCACAAGCATGTCCCTTTAATGGAAAATAATGCGCCTG
AAGCTGTCACCAATAATGTTCTAGGCACCAAAGCATTAACTGATTTGGCCGTTGAATTTGGGGTACAACATTTTGTCATG
ATTTCTACGGACAAAGCTGTTAACCCTACCAATGTAATGGGAGCTAGCAAGCGTATTGCCGAAATGATTGTGCTAAAAGC
AGCGCAAACTAGCGGACTCCCATTTGTCGTTGTTCGATTTGGCAATGTTCTGGGTAGTCGAGGCAGTGTGATTCCTACAT
TCAAACGACAGATTGCTGCAGGTGGACCGGTCACAGTGACTCATCCAGAGATATGCCGGTATTTTATGACCATCCCAGAA
GCAGTGCAATTAGTCCTACAAGCAGTGGTGATGAGCCCTGGCGGGGAGATATTGATGCTGAATATGGGGGAGCCTGTAAA
AATTGTGGATTTAGCGAAGGATCTCATTTGCTTATCGGGTTACCAAGTTGGCAAAGATATAGAAATTGCTTATACCGGGT
TACGGCCCGGCGAAAAGCTATTTGAAGAGTTGTTCCTGCCAGATGAAGAATATCAAAAGACTGGGCATGAGAAGTTGCTG
GTCGTCAAAAATGCTAGTCAAAATATTCCTAGTCAGCTATTGCAACATGTTGCTGATTTACTGCAATCTGCATCCATTAA
CGATTCCATGGAAATTCGGTCTTTACTTCAGAAGCTAGTACCTGGATATCAGACCAAGACGCCTGTCTCGCCTCGTTAA

Upstream 100 bases:

>100_bases
CTCAATGATCGATAGGTTAGGAAATTACTGCCTGCATCTCAGAAATCGTCACTTTTTACTTGTTGATATTATTGCCTTTA
CATTTATCCCACTGTTTGCT

Downstream 100 bases:

>100_bases
CGATATTTTTGTAGATACCAGCTAATCTACTGGCTAGTCACAAGAGGTGTAGAGTGCATCAGCCACAGGGAACTTATGAG
ATTACGAGACGTTCATGACG

Product: capsular polysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 612; Mature: 611

Protein sequence:

>612_residues
MSLRLDSALGFILTFERYQADLLLATLLFMVIKLTVFLSGGFYKHYWRYASIDELSNVAVLTGSSVILQTLAFAVLKSLS
ILSLPRSLPFLDGLLTLLIIGGIRFSVRAIERRKRQLETSERRDLRKRALVVGAGNAGVALVQELERSPHIGLLPIAFVD
DNPAKLNLRIRGLPVVGNRNVIPDTIKSWHIQTVIIAMPSLSGQSLRDIVALCQMTGVETLTLPALQDVLVGQQDLQNSI
REVQIEDLLRREPIQTDIQGVRQLLKGRRVLVTGAGGSIGSELCRQIFRCAPAELILLGHGENSVFQIQQELLQYQNHNG
VASSDVSVPILRPFIADLRHPSRLRFAFEEYQPEVVFHAAAHKHVPLMENNAPEAVTNNVLGTKALTDLAVEFGVQHFVM
ISTDKAVNPTNVMGASKRIAEMIVLKAAQTSGLPFVVVRFGNVLGSRGSVIPTFKRQIAAGGPVTVTHPEICRYFMTIPE
AVQLVLQAVVMSPGGEILMLNMGEPVKIVDLAKDLICLSGYQVGKDIEIAYTGLRPGEKLFEELFLPDEEYQKTGHEKLL
VVKNASQNIPSQLLQHVADLLQSASINDSMEIRSLLQKLVPGYQTKTPVSPR

Sequences:

>Translated_612_residues
MSLRLDSALGFILTFERYQADLLLATLLFMVIKLTVFLSGGFYKHYWRYASIDELSNVAVLTGSSVILQTLAFAVLKSLS
ILSLPRSLPFLDGLLTLLIIGGIRFSVRAIERRKRQLETSERRDLRKRALVVGAGNAGVALVQELERSPHIGLLPIAFVD
DNPAKLNLRIRGLPVVGNRNVIPDTIKSWHIQTVIIAMPSLSGQSLRDIVALCQMTGVETLTLPALQDVLVGQQDLQNSI
REVQIEDLLRREPIQTDIQGVRQLLKGRRVLVTGAGGSIGSELCRQIFRCAPAELILLGHGENSVFQIQQELLQYQNHNG
VASSDVSVPILRPFIADLRHPSRLRFAFEEYQPEVVFHAAAHKHVPLMENNAPEAVTNNVLGTKALTDLAVEFGVQHFVM
ISTDKAVNPTNVMGASKRIAEMIVLKAAQTSGLPFVVVRFGNVLGSRGSVIPTFKRQIAAGGPVTVTHPEICRYFMTIPE
AVQLVLQAVVMSPGGEILMLNMGEPVKIVDLAKDLICLSGYQVGKDIEIAYTGLRPGEKLFEELFLPDEEYQKTGHEKLL
VVKNASQNIPSQLLQHVADLLQSASINDSMEIRSLLQKLVPGYQTKTPVSPR
>Mature_611_residues
SLRLDSALGFILTFERYQADLLLATLLFMVIKLTVFLSGGFYKHYWRYASIDELSNVAVLTGSSVILQTLAFAVLKSLSI
LSLPRSLPFLDGLLTLLIIGGIRFSVRAIERRKRQLETSERRDLRKRALVVGAGNAGVALVQELERSPHIGLLPIAFVDD
NPAKLNLRIRGLPVVGNRNVIPDTIKSWHIQTVIIAMPSLSGQSLRDIVALCQMTGVETLTLPALQDVLVGQQDLQNSIR
EVQIEDLLRREPIQTDIQGVRQLLKGRRVLVTGAGGSIGSELCRQIFRCAPAELILLGHGENSVFQIQQELLQYQNHNGV
ASSDVSVPILRPFIADLRHPSRLRFAFEEYQPEVVFHAAAHKHVPLMENNAPEAVTNNVLGTKALTDLAVEFGVQHFVMI
STDKAVNPTNVMGASKRIAEMIVLKAAQTSGLPFVVVRFGNVLGSRGSVIPTFKRQIAAGGPVTVTHPEICRYFMTIPEA
VQLVLQAVVMSPGGEILMLNMGEPVKIVDLAKDLICLSGYQVGKDIEIAYTGLRPGEKLFEELFLPDEEYQKTGHEKLLV
VKNASQNIPSQLLQHVADLLQSASINDSMEIRSLLQKLVPGYQTKTPVSPR

Specific function: Involved in biofilm formation [H]

COG id: COG1086

COG function: function code MG; Predicted nucleoside-diphosphate sugar epimerases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003869 [H]

Pfam domain/function: PF02719 Polysacc_synt_2 [H]

EC number: NA

Molecular weight: Translated: 67403; Mature: 67272

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLRLDSALGFILTFERYQADLLLATLLFMVIKLTVFLSGGFYKHYWRYASIDELSNVAV
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHCCEEE
LTGSSVILQTLAFAVLKSLSILSLPRSLPFLDGLLTLLIIGGIRFSVRAIERRKRQLETS
ECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCHH
ERRDLRKRALVVGAGNAGVALVQELERSPHIGLLPIAFVDDNPAKLNLRIRGLPVVGNRN
HHHHHHHHEEEEECCCCHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEEEEEEEECCCC
VIPDTIKSWHIQTVIIAMPSLSGQSLRDIVALCQMTGVETLTLPALQDVLVGQQDLQNSI
CCCHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHCCHHHHHHHH
REVQIEDLLRREPIQTDIQGVRQLLKGRRVLVTGAGGSIGSELCRQIFRCAPAELILLGH
HHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEEC
GENSVFQIQQELLQYQNHNGVASSDVSVPILRPFIADLRHPSRLRFAFEEYQPEVVFHAA
CCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEC
AHKHVPLMENNAPEAVTNNVLGTKALTDLAVEFGVQHFVMISTDKAVNPTNVMGASKRIA
CCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHCCHHHHHH
EMIVLKAAQTSGLPFVVVRFGNVLGSRGSVIPTFKRQIAAGGPVTVTHPEICRYFMTIPE
HHHHHHHHCCCCCCEEEEEHHHHHCCCCCCCHHHHHHHCCCCCEEECCHHHHHHHHHHHH
AVQLVLQAVVMSPGGEILMLNMGEPVKIVDLAKDLICLSGYQVGKDIEIAYTGLRPGEKL
HHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHH
FEELFLPDEEYQKTGHEKLLVVKNASQNIPSQLLQHVADLLQSASINDSMEIRSLLQKLV
HHHHCCCCHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC
PGYQTKTPVSPR
CCCCCCCCCCCC
>Mature Secondary Structure 
SLRLDSALGFILTFERYQADLLLATLLFMVIKLTVFLSGGFYKHYWRYASIDELSNVAV
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHCCEEE
LTGSSVILQTLAFAVLKSLSILSLPRSLPFLDGLLTLLIIGGIRFSVRAIERRKRQLETS
ECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCHH
ERRDLRKRALVVGAGNAGVALVQELERSPHIGLLPIAFVDDNPAKLNLRIRGLPVVGNRN
HHHHHHHHEEEEECCCCHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEEEEEEEECCCC
VIPDTIKSWHIQTVIIAMPSLSGQSLRDIVALCQMTGVETLTLPALQDVLVGQQDLQNSI
CCCHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHCCHHHHHHHH
REVQIEDLLRREPIQTDIQGVRQLLKGRRVLVTGAGGSIGSELCRQIFRCAPAELILLGH
HHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEEC
GENSVFQIQQELLQYQNHNGVASSDVSVPILRPFIADLRHPSRLRFAFEEYQPEVVFHAA
CCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEC
AHKHVPLMENNAPEAVTNNVLGTKALTDLAVEFGVQHFVMISTDKAVNPTNVMGASKRIA
CCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHCCHHHHHH
EMIVLKAAQTSGLPFVVVRFGNVLGSRGSVIPTFKRQIAAGGPVTVTHPEICRYFMTIPE
HHHHHHHHCCCCCCEEEEEHHHHHCCCCCCCHHHHHHHCCCCCEEECCHHHHHHHHHHHH
AVQLVLQAVVMSPGGEILMLNMGEPVKIVDLAKDLICLSGYQVGKDIEIAYTGLRPGEKL
HHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHH
FEELFLPDEEYQKTGHEKLLVVKNASQNIPSQLLQHVADLLQSASINDSMEIRSLLQKLV
HHHHCCCCHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC
PGYQTKTPVSPR
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]