Click here to switch to the map view.

The map label for this gene is ydgJ [C]

Identifier: 158336756

GI number: 158336756

Start: 3680438

End: 3681382

Strand: Reverse

Name: ydgJ [C]

Synonym: AM1_3624

Alternate gene names: 158336756

Gene position: 3681382-3680438 (Counterclockwise)

Preceding gene: 158336757

Following gene: 158336755

Centisome position: 56.6

GC content: 46.24

Gene sequence:

>945_bases
ATGAAACAAGTTGTTGTCGTCGGCGCAGGAAACTGGGGTAAGAACCTCGTCAAGAATTTTCATGAACTCAATGCTTTAGC
AGGAGTGGCTGAAATGAGTTCAGATTTGCGTCAGGCGGTAGCCAATAGCTATCCAGATCTTCAGGTGTATGCTGATTATC
GCGATGTTTTAAATACCGACATTTCGGCCATTGTCATTGCAACACCAGCACCGACCCATTATTCATTGGCAAAAGCAGCT
TTAGCTGCCGGTAAAGATGTATTTATCGAAAAACCAATGACCTTAAACACACAAGATGCGATCGCATTGGCGAAATATGC
CGATCAACACGATCTCATTTTGATGGTGGGACATTTATTGCTGTATCAACCTGCGATCGCATGGATGAGAGACTATCTCT
CTACTGGAAAAGCAGGTAAAGTCCTCCATGTTATGGCCCAACGAGCCAAGTTGGGAAGAGTCCGTGCAGAAGAAAATGTA
TGGTGGTCCTTTGCCCCCCATGACGTCTCCGTTGTTCTCGATCTACTGGGCAACCCGACGCTCAAATCCATCCAAGCCAG
CGGTCATGCCATACTTCAGCCGGATGTTGAAGATAATGTGCATGTTGATTTGGTCTTTGAGAATGGCCAAACCGCTCATA
TTCATGCGTCTTGGTATCACCCTTTACTACAGCGATGCACCACTATCCTGGCAGAACAGCAAATGCTGGTTTATGACGAA
GTCACCCAACAAGTCACCGTTTACGAAAAATCCATTGATACCAATCTTCAAAATACAGATACAGGGTCCTGGCTCGCTAA
CGTAGCGACAACACAGCCCCTTAAGTTAGAGTGCGAACATTTCCTTGAATGTTTGAAAACACGCCAACAGCCCCGATCGA
ATGGTTGGAATGGAGTTGCCGTAGTTGACATTTTAGAAAAGGCCCAGGAGGCAATGCGTGGGTGA

Upstream 100 bases:

>100_bases
TACTCGTGGGATTACCCGAAAATTATCAGACGCACAATCTACCTCATATCAATCTAAAATTACACTGCTCTAGATCCATT
TAGAATTCGTCAGTCTCTCT

Downstream 100 bases:

>100_bases
GTCAAATAGAAAGCAACGAGACTATTTTATTCATGAATCTTCCTATGTCGATGAAGGTGCAAAGATTGGTACAGGGACTA
AAATTTGGCATTTTTGTCAT

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: Oxidoreductase Domain-Containing Protein; Oxidoreductase; Dehydrogenase; Gfo/Idh/MocA Family Oxidoreductase; Oxidoreductase-Like; Oxidoreductase Gfo/Idh/MocA Family; Myo-Inositol 2-Dehydrogenase; Oxidoreductase-Like Protein; GFO/IDH/MocA Family Oxidoreductase; NADH-Dependent Dehydrogenase; Inositol 2-Dehydrogenase; Oxidoreductase Family Protein; Dehydrogenase And Related Protein; NAD-Dependent Oxidoreductase; Oxidoreductase Gfo/Idh/MocA Family Protein; NADH-Dependent Dehydrogenase Family Protein; NADH Dependent Dehydrogenase Like Protein; Oxidoreductase GFO/IDH/MOCA Family; NADH-Dependent Dyhydrogenase; NAD(P)-Dependent Oxidoreductase; Glucose-Fructose Oxidoreductase; Semialdehyde Dehydrogenase NAD; Hexapeptide Repeat-Containing Transferase; 3-Chlorobenzoate-3 4-Dioxygenase Dyhydrogenase; NAD-Dependent Dehydrogenase; Oxidoreductase YhhX

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MKQVVVVGAGNWGKNLVKNFHELNALAGVAEMSSDLRQAVANSYPDLQVYADYRDVLNTDISAIVIATPAPTHYSLAKAA
LAAGKDVFIEKPMTLNTQDAIALAKYADQHDLILMVGHLLLYQPAIAWMRDYLSTGKAGKVLHVMAQRAKLGRVRAEENV
WWSFAPHDVSVVLDLLGNPTLKSIQASGHAILQPDVEDNVHVDLVFENGQTAHIHASWYHPLLQRCTTILAEQQMLVYDE
VTQQVTVYEKSIDTNLQNTDTGSWLANVATTQPLKLECEHFLECLKTRQQPRSNGWNGVAVVDILEKAQEAMRG

Sequences:

>Translated_314_residues
MKQVVVVGAGNWGKNLVKNFHELNALAGVAEMSSDLRQAVANSYPDLQVYADYRDVLNTDISAIVIATPAPTHYSLAKAA
LAAGKDVFIEKPMTLNTQDAIALAKYADQHDLILMVGHLLLYQPAIAWMRDYLSTGKAGKVLHVMAQRAKLGRVRAEENV
WWSFAPHDVSVVLDLLGNPTLKSIQASGHAILQPDVEDNVHVDLVFENGQTAHIHASWYHPLLQRCTTILAEQQMLVYDE
VTQQVTVYEKSIDTNLQNTDTGSWLANVATTQPLKLECEHFLECLKTRQQPRSNGWNGVAVVDILEKAQEAMRG
>Mature_314_residues
MKQVVVVGAGNWGKNLVKNFHELNALAGVAEMSSDLRQAVANSYPDLQVYADYRDVLNTDISAIVIATPAPTHYSLAKAA
LAAGKDVFIEKPMTLNTQDAIALAKYADQHDLILMVGHLLLYQPAIAWMRDYLSTGKAGKVLHVMAQRAKLGRVRAEENV
WWSFAPHDVSVVLDLLGNPTLKSIQASGHAILQPDVEDNVHVDLVFENGQTAHIHASWYHPLLQRCTTILAEQQMLVYDE
VTQQVTVYEKSIDTNLQNTDTGSWLANVATTQPLKLECEHFLECLKTRQQPRSNGWNGVAVVDILEKAQEAMRG

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081947, Length=161, Percent_Identity=29.8136645962733, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.-.-.- [C]

Molecular weight: Translated: 34774; Mature: 34774

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQVVVVGAGNWGKNLVKNFHELNALAGVAEMSSDLRQAVANSYPDLQVYADYRDVLNTD
CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHCCC
ISAIVIATPAPTHYSLAKAALAAGKDVFIEKPMTLNTQDAIALAKYADQHDLILMVGHLL
CCEEEEECCCCCHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHH
LYQPAIAWMRDYLSTGKAGKVLHVMAQRAKLGRVRAEENVWWSFAPHDVSVVLDLLGNPT
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHCCCC
LKSIQASGHAILQPDVEDNVHVDLVFENGQTAHIHASWYHPLLQRCTTILAEQQMLVYDE
HHHHHCCCCEEECCCCCCCEEEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
VTQQVTVYEKSIDTNLQNTDTGSWLANVATTQPLKLECEHFLECLKTRQQPRSNGWNGVA
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCEECHHHHHHHHHHHCCCCCCCCCCHH
VVDILEKAQEAMRG
HHHHHHHHHHHHCC
>Mature Secondary Structure
MKQVVVVGAGNWGKNLVKNFHELNALAGVAEMSSDLRQAVANSYPDLQVYADYRDVLNTD
CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHCCC
ISAIVIATPAPTHYSLAKAALAAGKDVFIEKPMTLNTQDAIALAKYADQHDLILMVGHLL
CCEEEEECCCCCHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHH
LYQPAIAWMRDYLSTGKAGKVLHVMAQRAKLGRVRAEENVWWSFAPHDVSVVLDLLGNPT
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHCCCC
LKSIQASGHAILQPDVEDNVHVDLVFENGQTAHIHASWYHPLLQRCTTILAEQQMLVYDE
HHHHHCCCCEEECCCCCCCEEEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
VTQQVTVYEKSIDTNLQNTDTGSWLANVATTQPLKLECEHFLECLKTRQQPRSNGWNGVA
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCEECHHHHHHHHHHHCCCCCCCCCCHH
VVDILEKAQEAMRG
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA