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The map label for this gene is ydjX [H]

Identifier: 158336645

GI number: 158336645

Start: 3555627

End: 3556292

Strand: Direct

Name: ydjX [H]

Synonym: AM1_3513

Alternate gene names: 158336645

Gene position: 3555627-3556292 (Clockwise)

Preceding gene: 158336642

Following gene: 158336646

Centisome position: 54.67

GC content: 50.45

Gene sequence:

>666_bases
ATGAAACGAGCAAAATTCCTCACTCCCCGTATGAGCATCTTGCTCCTAACTGTGGTGTGTGTAGTGGCAACAGGCATCGC
TCTACTGGCGTTGGGTAAGCTGGATACTACTCAAATTGAGGACATGGTTAGCCGTGTAGGGATTTGGGGACCCATTTATT
ACATCTTGGCTTATGTCATCGCCACCCTCTTGGTTCTTCCTTCAACAGCCCTAAATCTCATGGGAGGGGGATTGTTCGGC
CCTTGGTTAGGAACCCTTTGGACAAGCCTTGCCGCCATTATTGCCGCAGTTGTGGCTTTTTACTTGAGCCGCACTATTGG
CCGCGAGCCGATTGCGAAACGATTAGCGGGACGCTGGCAAAAAATGGATGCTGAGGTCAAGCGTGGTGGTCTCTTCTACA
TGTTTGCGATTCGTTTAGTGCCGATTATGCCCTATGGCCTGGTGAACTTTGCAGCGGGTCTCACCTCTATCCGCTTTCGT
GATTTTCTAATTGGGACAATCTTGGGCACCATTCCCAGTGTCTTGCCCTTTGTCCTCATCGGTAGTTCCAGCGTGCAAGC
CCTCAACTCTGGTAATGTTGCCCCTTTAATCGGTGCCTTGGCATTAACCGGAATCCTGGTAGCAGGATCAACCTATTGGC
GACAAAAACGGTACAAGCGGAGTTGA

Upstream 100 bases:

>100_bases
CTGCTTCAAGGATATTACGATGTCAAATGTTGGCTACATCCTCCCTACCCGGTATAACGCTCAAACTCTCGTGTCTAAGC
TGTCCTTATGTGTCTGAACC

Downstream 100 bases:

>100_bases
TACCCGCGAAAAAGTGTTATGAACGCTACCGTTCAGTGCAAAACTGGTAGGTGGAGCTGACGCAATAATCTAAAAGTATG
ACCAAAACAGCATGGGTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MKRAKFLTPRMSILLLTVVCVVATGIALLALGKLDTTQIEDMVSRVGIWGPIYYILAYVIATLLVLPSTALNLMGGGLFG
PWLGTLWTSLAAIIAAVVAFYLSRTIGREPIAKRLAGRWQKMDAEVKRGGLFYMFAIRLVPIMPYGLVNFAAGLTSIRFR
DFLIGTILGTIPSVLPFVLIGSSSVQALNSGNVAPLIGALALTGILVAGSTYWRQKRYKRS

Sequences:

>Translated_221_residues
MKRAKFLTPRMSILLLTVVCVVATGIALLALGKLDTTQIEDMVSRVGIWGPIYYILAYVIATLLVLPSTALNLMGGGLFG
PWLGTLWTSLAAIIAAVVAFYLSRTIGREPIAKRLAGRWQKMDAEVKRGGLFYMFAIRLVPIMPYGLVNFAAGLTSIRFR
DFLIGTILGTIPSVLPFVLIGSSSVQALNSGNVAPLIGALALTGILVAGSTYWRQKRYKRS
>Mature_221_residues
MKRAKFLTPRMSILLLTVVCVVATGIALLALGKLDTTQIEDMVSRVGIWGPIYYILAYVIATLLVLPSTALNLMGGGLFG
PWLGTLWTSLAAIIAAVVAFYLSRTIGREPIAKRLAGRWQKMDAEVKRGGLFYMFAIRLVPIMPYGLVNFAAGLTSIRFR
DFLIGTILGTIPSVLPFVLIGSSSVQALNSGNVAPLIGALALTGILVAGSTYWRQKRYKRS

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TVP38/TMEM64 family [H]

Homologues:

Organism=Escherichia coli, GI87081964, Length=194, Percent_Identity=32.9896907216495, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1788049, Length=196, Percent_Identity=30.1020408163265, Blast_Score=78, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 23921; Mature: 23921

Theoretical pI: Translated: 11.08; Mature: 11.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRAKFLTPRMSILLLTVVCVVATGIALLALGKLDTTQIEDMVSRVGIWGPIYYILAYVI
CCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHH
ATLLVLPSTALNLMGGGLFGPWLGTLWTSLAAIIAAVVAFYLSRTIGREPIAKRLAGRWQ
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
KMDAEVKRGGLFYMFAIRLVPIMPYGLVNFAAGLTSIRFRDFLIGTILGTIPSVLPFVLI
HHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GSSSVQALNSGNVAPLIGALALTGILVAGSTYWRQKRYKRS
CCCHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCCC
>Mature Secondary Structure
MKRAKFLTPRMSILLLTVVCVVATGIALLALGKLDTTQIEDMVSRVGIWGPIYYILAYVI
CCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHH
ATLLVLPSTALNLMGGGLFGPWLGTLWTSLAAIIAAVVAFYLSRTIGREPIAKRLAGRWQ
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
KMDAEVKRGGLFYMFAIRLVPIMPYGLVNFAAGLTSIRFRDFLIGTILGTIPSVLPFVLI
HHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GSSSVQALNSGNVAPLIGALALTGILVAGSTYWRQKRYKRS
CCCHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]