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The map label for this gene is phoD [H]

Identifier: 158336632

GI number: 158336632

Start: 3540704

End: 3542269

Strand: Direct

Name: phoD [H]

Synonym: AM1_3500

Alternate gene names: 158336632

Gene position: 3540704-3542269 (Clockwise)

Preceding gene: 158336631

Following gene: 158336634

Centisome position: 54.44

GC content: 50.96

Gene sequence:

>1566_bases
ATGCTCAATCGACGACAGTTTTTGTTGACGGTGGGGGCAGTTATGGGTCTTGTCGTTCTCAGGGATCAGTCGCCCCCGAT
CTTGGCTCAGCCCCAATTTTCTGCCTATCCCTTTAGCCTAGGCGTTGCCTCCGGCGATCCTCGACCCGATAGCGTTGTCC
TCTGGACACGGTTAGCCCCTAACCCTTTATCGGGGCAACCTATGCCTGCGGTTGCTATTCCTGTTCAGTGGCAGATTGCA
ACGGATGCCCAGATGACCGAGGTGATTCAACAGGGAACGACCCAGGCTACGCCACAATGGGGACATTCCGTTCATGTGGT
GGCAGACAATTTGTCTCCAAGCCAGTGGTATTGGTATCAATTCCAAGTGGGGTCAGAAACAAGCCCGATTGGTCGAACTC
GAACCCTGCCGGCCTTGGACACAGACCCTGAGCAGTTAAAGTTTGCGTTTGTGTCTTGCCAGCATTACGAAAAGGGATAC
TTCACGGCCTATCAACATCTCGTTCAAGAAGATTTAGATCTGGTCTTTCACTTGGGGGACTATATCTATGAAGGCGGTCC
TCACAAAGGGCGGCCCAGACAACATATAGGGCCTAACCCCATCGATCTAGAGACGTATCGTCTACGTTATGCCCTGTACA
AAAACGACCCCCAATTGCAGGCCGCCCATGCAGCATTTCCCTTTATCTGCATTTGGGATGACCATGAAGTCGATGAAGAC
TATGCCCAAGACCAGTCCCAAAACTATGATGACCCTAATGTCTTTCGCAAACGTCGATGGGCAGCCTATCAAGCCTATTA
TGAGCATCTGCCGTTACGGCCCACTGCTCAGCCTCAAAACGGCCAAGTCCAACTGTTTCGTCGCTTCCAGTTTGGCCAAT
TAGCTGAGTTTCATTGCTTAGATAACCGCCAGTATCGGGACGATCAACCTTGCGCCACTGAGGGAATAGGAGGAGGCGCG
ATAGTCTCAGCCTGCCAAGACCGTTTAGCGGCTGACCATTCCATGCTGGGTAAACCACAAGAGGCTTGGCTGATCCAGGG
GCTACAAAACTCTTCCGCTCATTGGCAGGTGATTGCCCAACAACAGCTGATGGCAGAACTGAAGTTTGGTCTGGAAACAG
TATCTGGGTATTGGACAGATGGCTGGGATGGCTATGCCGCCTCACGCCAACGCATCTTGGATGTTGTTGAGCAACGCCCC
CTGAAAAATGTGGTTGTGATTGGGGGAGACATTCATGCTTTTGGGGTTGCAGATCTAAAGACAAATTTTCAGGATCCTCA
GTCCCCTATCATTGGGACTGAATTTGTGGGTACCTCCATTAGTTCTACGGGGCTACCGCAGGCGCTCTATTCCCTCAGTC
AAAAAATAAATCCTCACATCAAATTTTTGGATACCCGCCATCGAGGCTATGTCCTTTGTCAGATCACGCGGGAGGTTTGG
ACTGCCCATTTACGCATCGTTAATTCCGTCGAACAGTCTGAGTCCACTATTCGAACCCTGGCTTCTTTTCAAGTCAAAAA
TGGCCAACCTGGAGCCATTCCCATAGAAGCCATGGCAAACCCTTGA

Upstream 100 bases:

>100_bases
AATTCATGGCATCTAATTCCCAGCATATTTAGAGATCTGGGAATTAGATGCCATAGCCCTTGGCCCCAGTTCTGTAGCGC
TTAACCCAACCAAATATTTA

Downstream 100 bases:

>100_bases
TATGCGGCTCACTTAAAGCTCAATCTGGCCGGTTAGCATATCCTTCATCATGGCAAAATCGCCTCGTAGGCTCCACAACG
GATAATTGAAGGTGGCTGGC

Product: alkaline phosphatase D

Products: NA

Alternate protein names: APaseD [H]

Number of amino acids: Translated: 521; Mature: 521

Protein sequence:

>521_residues
MLNRRQFLLTVGAVMGLVVLRDQSPPILAQPQFSAYPFSLGVASGDPRPDSVVLWTRLAPNPLSGQPMPAVAIPVQWQIA
TDAQMTEVIQQGTTQATPQWGHSVHVVADNLSPSQWYWYQFQVGSETSPIGRTRTLPALDTDPEQLKFAFVSCQHYEKGY
FTAYQHLVQEDLDLVFHLGDYIYEGGPHKGRPRQHIGPNPIDLETYRLRYALYKNDPQLQAAHAAFPFICIWDDHEVDED
YAQDQSQNYDDPNVFRKRRWAAYQAYYEHLPLRPTAQPQNGQVQLFRRFQFGQLAEFHCLDNRQYRDDQPCATEGIGGGA
IVSACQDRLAADHSMLGKPQEAWLIQGLQNSSAHWQVIAQQQLMAELKFGLETVSGYWTDGWDGYAASRQRILDVVEQRP
LKNVVVIGGDIHAFGVADLKTNFQDPQSPIIGTEFVGTSISSTGLPQALYSLSQKINPHIKFLDTRHRGYVLCQITREVW
TAHLRIVNSVEQSESTIRTLASFQVKNGQPGAIPIEAMANP

Sequences:

>Translated_521_residues
MLNRRQFLLTVGAVMGLVVLRDQSPPILAQPQFSAYPFSLGVASGDPRPDSVVLWTRLAPNPLSGQPMPAVAIPVQWQIA
TDAQMTEVIQQGTTQATPQWGHSVHVVADNLSPSQWYWYQFQVGSETSPIGRTRTLPALDTDPEQLKFAFVSCQHYEKGY
FTAYQHLVQEDLDLVFHLGDYIYEGGPHKGRPRQHIGPNPIDLETYRLRYALYKNDPQLQAAHAAFPFICIWDDHEVDED
YAQDQSQNYDDPNVFRKRRWAAYQAYYEHLPLRPTAQPQNGQVQLFRRFQFGQLAEFHCLDNRQYRDDQPCATEGIGGGA
IVSACQDRLAADHSMLGKPQEAWLIQGLQNSSAHWQVIAQQQLMAELKFGLETVSGYWTDGWDGYAASRQRILDVVEQRP
LKNVVVIGGDIHAFGVADLKTNFQDPQSPIIGTEFVGTSISSTGLPQALYSLSQKINPHIKFLDTRHRGYVLCQITREVW
TAHLRIVNSVEQSESTIRTLASFQVKNGQPGAIPIEAMANP
>Mature_521_residues
MLNRRQFLLTVGAVMGLVVLRDQSPPILAQPQFSAYPFSLGVASGDPRPDSVVLWTRLAPNPLSGQPMPAVAIPVQWQIA
TDAQMTEVIQQGTTQATPQWGHSVHVVADNLSPSQWYWYQFQVGSETSPIGRTRTLPALDTDPEQLKFAFVSCQHYEKGY
FTAYQHLVQEDLDLVFHLGDYIYEGGPHKGRPRQHIGPNPIDLETYRLRYALYKNDPQLQAAHAAFPFICIWDDHEVDED
YAQDQSQNYDDPNVFRKRRWAAYQAYYEHLPLRPTAQPQNGQVQLFRRFQFGQLAEFHCLDNRQYRDDQPCATEGIGGGA
IVSACQDRLAADHSMLGKPQEAWLIQGLQNSSAHWQVIAQQQLMAELKFGLETVSGYWTDGWDGYAASRQRILDVVEQRP
LKNVVVIGGDIHAFGVADLKTNFQDPQSPIIGTEFVGTSISSTGLPQALYSLSQKINPHIKFLDTRHRGYVLCQITREVW
TAHLRIVNSVEQSESTIRTLASFQVKNGQPGAIPIEAMANP

Specific function: Unknown

COG id: COG3540

COG function: function code P; Phosphodiesterase/alkaline phosphatase D

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PhoD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018946
- InterPro:   IPR006311 [H]

Pfam domain/function: PF09423 PhoD [H]

EC number: =3.1.3.1 [H]

Molecular weight: Translated: 58654; Mature: 58654

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNRRQFLLTVGAVMGLVVLRDQSPPILAQPQFSAYPFSLGVASGDPRPDSVVLWTRLAP
CCCCHHHHHHHHHHHHEEEEECCCCCEEECCCCCCCCEEEEECCCCCCCCCEEEEEEECC
NPLSGQPMPAVAIPVQWQIATDAQMTEVIQQGTTQATPQWGHSVHVVADNLSPSQWYWYQ
CCCCCCCCCEEEEEEEEEECCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCEEEEEE
FQVGSETSPIGRTRTLPALDTDPEQLKFAFVSCQHYEKGYFTAYQHLVQEDLDLVFHLGD
EEECCCCCCCCCCCCCCCCCCCHHHHEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHH
YIYEGGPHKGRPRQHIGPNPIDLETYRLRYALYKNDPQLQAAHAAFPFICIWDDHEVDED
HHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCEEHHCCCCEEEEECCCCCCHH
YAQDQSQNYDDPNVFRKRRWAAYQAYYEHLPLRPTAQPQNGQVQLFRRFQFGQLAEFHCL
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHCCCCCCEEEEC
DNRQYRDDQPCATEGIGGGAIVSACQDRLAADHSMLGKPQEAWLIQGLQNSSAHWQVIAQ
CCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCEEHHHH
QQLMAELKFGLETVSGYWTDGWDGYAASRQRILDVVEQRPLKNVVVIGGDIHAFGVADLK
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEEHHHH
TNFQDPQSPIIGTEFVGTSISSTGLPQALYSLSQKINPHIKFLDTRHRGYVLCQITREVW
CCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEHHHH
TAHLRIVNSVEQSESTIRTLASFQVKNGQPGAIPIEAMANP
HHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEECCCC
>Mature Secondary Structure
MLNRRQFLLTVGAVMGLVVLRDQSPPILAQPQFSAYPFSLGVASGDPRPDSVVLWTRLAP
CCCCHHHHHHHHHHHHEEEEECCCCCEEECCCCCCCCEEEEECCCCCCCCCEEEEEEECC
NPLSGQPMPAVAIPVQWQIATDAQMTEVIQQGTTQATPQWGHSVHVVADNLSPSQWYWYQ
CCCCCCCCCEEEEEEEEEECCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCEEEEEE
FQVGSETSPIGRTRTLPALDTDPEQLKFAFVSCQHYEKGYFTAYQHLVQEDLDLVFHLGD
EEECCCCCCCCCCCCCCCCCCCHHHHEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHH
YIYEGGPHKGRPRQHIGPNPIDLETYRLRYALYKNDPQLQAAHAAFPFICIWDDHEVDED
HHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCEEHHCCCCEEEEECCCCCCHH
YAQDQSQNYDDPNVFRKRRWAAYQAYYEHLPLRPTAQPQNGQVQLFRRFQFGQLAEFHCL
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHCCCCCCEEEEC
DNRQYRDDQPCATEGIGGGAIVSACQDRLAADHSMLGKPQEAWLIQGLQNSSAHWQVIAQ
CCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCEEHHHH
QQLMAELKFGLETVSGYWTDGWDGYAASRQRILDVVEQRPLKNVVVIGGDIHAFGVADLK
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEEHHHH
TNFQDPQSPIIGTEFVGTSISSTGLPQALYSLSQKINPHIKFLDTRHRGYVLCQITREVW
CCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEHHHH
TAHLRIVNSVEQSESTIRTLASFQVKNGQPGAIPIEAMANP
HHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760916; 9384377; 7704254; 25878 [H]