| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
Click here to switch to the map view.
The map label for this gene is 158336607
Identifier: 158336607
GI number: 158336607
Start: 3509425
End: 3509967
Strand: Direct
Name: 158336607
Synonym: AM1_3473
Alternate gene names: NA
Gene position: 3509425-3509967 (Clockwise)
Preceding gene: 158336606
Following gene: 158336608
Centisome position: 53.96
GC content: 51.38
Gene sequence:
>543_bases ATGCAACGCATTACTCTATCTCAACTGACTCAGACCGCAACTCAACGCCTGTTGACGTTAGGAGCTTTAGTCACCCTCTC TGCTAGCAGTGTGATAGCAGCGCCGCAGCAGGCCCAATGCCCGGACGGTTGGGAACCCTCTCCTAGCCCCGCTACTAAAT GTCAACCCGGCAGTTTCACGCATCAGACTCCTCAACCGCTGCGTTTTCGCAGAGCAGATCTAAAGGTTCGGCAGTATCGA TTTAGTCGCAGGAGTACCAAACGAATCAAGATTCAGGTGGCGAATGCCGGACTTAGAGCAGCACGGCCTACGGTGCTACG CCTGACAGTTCGGCGTATTGATGGTACACCGGTCGGGCGGATGATGAAGATCAAAGTGCCCATTATTAACGGTCGGCAAA CCCAATGGGTGAGCTTGAATGCCGCTCAGATTTTGCCCAAAACAGTGGCCCTCAAAGACACCACCTTTCGCATTGATGTG GATTCAACGAATTTCGTGAAAGAATCCAACGAAAAAAACAATACCACTTGGCACAACCTTTAG
Upstream 100 bases:
>100_bases TAAAAAATTTCCACTCTGCATAATCTCTAGAAAACTACCCTACTGAGTGAATGAAGAGCTTTGCTTCTCTTTCAAACATT CCACAGTAAGGTACAACACT
Downstream 100 bases:
>100_bases GGGATGTGGATCGGGAGAGAGTGTTGTGTCTAGGGCTCTCTTCCTGCGGCTTTTTGCCTGAGAATACACCGTCCACATGT GATGGTTATCACTTCTCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MQRITLSQLTQTATQRLLTLGALVTLSASSVIAAPQQAQCPDGWEPSPSPATKCQPGSFTHQTPQPLRFRRADLKVRQYR FSRRSTKRIKIQVANAGLRAARPTVLRLTVRRIDGTPVGRMMKIKVPIINGRQTQWVSLNAAQILPKTVALKDTTFRIDV DSTNFVKESNEKNNTTWHNL
Sequences:
>Translated_180_residues MQRITLSQLTQTATQRLLTLGALVTLSASSVIAAPQQAQCPDGWEPSPSPATKCQPGSFTHQTPQPLRFRRADLKVRQYR FSRRSTKRIKIQVANAGLRAARPTVLRLTVRRIDGTPVGRMMKIKVPIINGRQTQWVSLNAAQILPKTVALKDTTFRIDV DSTNFVKESNEKNNTTWHNL >Mature_180_residues MQRITLSQLTQTATQRLLTLGALVTLSASSVIAAPQQAQCPDGWEPSPSPATKCQPGSFTHQTPQPLRFRRADLKVRQYR FSRRSTKRIKIQVANAGLRAARPTVLRLTVRRIDGTPVGRMMKIKVPIINGRQTQWVSLNAAQILPKTVALKDTTFRIDV DSTNFVKESNEKNNTTWHNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20186; Mature: 20186
Theoretical pI: Translated: 12.14; Mature: 12.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRITLSQLTQTATQRLLTLGALVTLSASSVIAAPQQAQCPDGWEPSPSPATKCQPGSFT CCCCCHHHHHHHHHHHHHHHHHHHEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC HQTPQPLRFRRADLKVRQYRFSRRSTKRIKIQVANAGLRAARPTVLRLTVRRIDGTPVGR CCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCEEEEEEEEECCCCCCCE MMKIKVPIINGRQTQWVSLNAAQILPKTVALKDTTFRIDVDSTNFVKESNEKNNTTWHNL EEEEEEEEECCCCEEEEECCHHHHCCEEEEECCCEEEEECCCCCCEECCCCCCCCCCCCC >Mature Secondary Structure MQRITLSQLTQTATQRLLTLGALVTLSASSVIAAPQQAQCPDGWEPSPSPATKCQPGSFT CCCCCHHHHHHHHHHHHHHHHHHHEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC HQTPQPLRFRRADLKVRQYRFSRRSTKRIKIQVANAGLRAARPTVLRLTVRRIDGTPVGR CCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCEEEEEEEEECCCCCCCE MMKIKVPIINGRQTQWVSLNAAQILPKTVALKDTTFRIDVDSTNFVKESNEKNNTTWHNL EEEEEEEEECCCCEEEEECCHHHHCCEEEEECCCEEEEECCCCCCEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA