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The map label for this gene is ycdJ [C]

Identifier: 158336587

GI number: 158336587

Start: 3481235

End: 3482092

Strand: Direct

Name: ycdJ [C]

Synonym: AM1_3451

Alternate gene names: 158336587

Gene position: 3481235-3482092 (Clockwise)

Preceding gene: 158336586

Following gene: 158336588

Centisome position: 53.53

GC content: 51.52

Gene sequence:

>858_bases
ATGCCTCAGGCTCTCATTCGCGGTCATGATCACTACTATGAATGGGTGACGCAAGACCCTCGTCAGTTGAGATCTGGAAA
GCCTGTGATGGTCTTTCTCCATGGTTGGGGAGGTTCGAGTCGCTATTGGCGACCTATCGCCCAAGCGCTGGCTGCCGATT
TTGATTGTTTACTGTACGATCTCCGTGGGTTTGGGCAATCCCAAGATTCACTGCGGGCGTCTAGAGATGTCGAGACATAT
ACGATTCAATCCTATGTGGAAGATTTAGAGGTTTTATTGGATGCTTTGGAGATTTCGCAAGTGTTTCTCCAAGCCCATTC
CATGGGATCGACGATTGGTGCTTTGTTCCTCAATCAATATCCTCAGCGAGTTCAGCAAGCGATTCTTGCCTGTAGTGGGT
TGTTTGAATATGATGAGGAAGAATTCCGTCAGTTTCATCAGGTGGGTGAGTGGGTGGTGCGATTACGGCCTCGTTGGCTG
GCCCAGGTGCCCCTCTTAGATCGGCTGTTTATGGCCCGCTTTCTCCATCGGCCCATTGCCGCTGACCAACGCCGAGGGTT
TGTGTCGGACTATGTGGGGGCAGATGCAGTCGCTGCGTTGGGAACCTTATTGTCTGCTGTGAGTGAGTCGGTGGCAACGG
CCATGTCTGCAGAATTTGCCCAGCTCCAAACGCCCACGTTAATTGTGTCGGGGGATAAGGATCAGATTGTTCCAGCGGAC
TCGGGGGAGGAAGCTGCTGCTTTGAATCCCAATATTGACTATGTGAGGATGGCCCAAACGGGGCATTTCCCCATGTTGGA
AGATACCTCCACCTATCTACAGCATATTCACCACTTTTTAACGCCGGTGACCTGTTGA

Upstream 100 bases:

>100_bases
CTCGATGGTGGAACAGCGGTCGACGGCTGAGTTGTTGGTGCATCCTTCCGCCATCTCGACCCCAGAATCTGCATAAGTTC
GTTTCGGTCACATTTATTTC

Downstream 100 bases:

>100_bases
GATGGTAGAGTGCGCCCCCGATCTTCAGATTCAGCCTCTGGGAACTGATTTGGTTCATCGAATTGCGGCAGGAGAGGTGA
TTGATTCCCTCGGGGCTGTC

Product: alpha/beta hydrolase fold protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MPQALIRGHDHYYEWVTQDPRQLRSGKPVMVFLHGWGGSSRYWRPIAQALAADFDCLLYDLRGFGQSQDSLRASRDVETY
TIQSYVEDLEVLLDALEISQVFLQAHSMGSTIGALFLNQYPQRVQQAILACSGLFEYDEEEFRQFHQVGEWVVRLRPRWL
AQVPLLDRLFMARFLHRPIAADQRRGFVSDYVGADAVAALGTLLSAVSESVATAMSAEFAQLQTPTLIVSGDKDQIVPAD
SGEEAAALNPNIDYVRMAQTGHFPMLEDTSTYLQHIHHFLTPVTC

Sequences:

>Translated_285_residues
MPQALIRGHDHYYEWVTQDPRQLRSGKPVMVFLHGWGGSSRYWRPIAQALAADFDCLLYDLRGFGQSQDSLRASRDVETY
TIQSYVEDLEVLLDALEISQVFLQAHSMGSTIGALFLNQYPQRVQQAILACSGLFEYDEEEFRQFHQVGEWVVRLRPRWL
AQVPLLDRLFMARFLHRPIAADQRRGFVSDYVGADAVAALGTLLSAVSESVATAMSAEFAQLQTPTLIVSGDKDQIVPAD
SGEEAAALNPNIDYVRMAQTGHFPMLEDTSTYLQHIHHFLTPVTC
>Mature_284_residues
PQALIRGHDHYYEWVTQDPRQLRSGKPVMVFLHGWGGSSRYWRPIAQALAADFDCLLYDLRGFGQSQDSLRASRDVETYT
IQSYVEDLEVLLDALEISQVFLQAHSMGSTIGALFLNQYPQRVQQAILACSGLFEYDEEEFRQFHQVGEWVVRLRPRWLA
QVPLLDRLFMARFLHRPIAADQRRGFVSDYVGADAVAALGTLLSAVSESVATAMSAEFAQLQTPTLIVSGDKDQIVPADS
GEEAAALNPNIDYVRMAQTGHFPMLEDTSTYLQHIHHFLTPVTC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dmpD/todF/xylF esterase family [H]

Homologues:

Organism=Escherichia coli, GI1787244, Length=247, Percent_Identity=25.1012145748988, Blast_Score=64, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR000639 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 32123; Mature: 31992

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQALIRGHDHYYEWVTQDPRQLRSGKPVMVFLHGWGGSSRYWRPIAQALAADFDCLLYD
CCCHHHCCCHHHHHHHCCCHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
LRGFGQSQDSLRASRDVETYTIQSYVEDLEVLLDALEISQVFLQAHSMGSTIGALFLNQY
HHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PQRVQQAILACSGLFEYDEEEFRQFHQVGEWVVRLRPRWLAQVPLLDRLFMARFLHRPIA
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCC
ADQRRGFVSDYVGADAVAALGTLLSAVSESVATAMSAEFAQLQTPTLIVSGDKDQIVPAD
CHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCC
SGEEAAALNPNIDYVRMAQTGHFPMLEDTSTYLQHIHHFLTPVTC
CCCCCEECCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PQALIRGHDHYYEWVTQDPRQLRSGKPVMVFLHGWGGSSRYWRPIAQALAADFDCLLYD
CCHHHCCCHHHHHHHCCCHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
LRGFGQSQDSLRASRDVETYTIQSYVEDLEVLLDALEISQVFLQAHSMGSTIGALFLNQY
HHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PQRVQQAILACSGLFEYDEEEFRQFHQVGEWVVRLRPRWLAQVPLLDRLFMARFLHRPIA
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCC
ADQRRGFVSDYVGADAVAALGTLLSAVSESVATAMSAEFAQLQTPTLIVSGDKDQIVPAD
CHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCC
SGEEAAALNPNIDYVRMAQTGHFPMLEDTSTYLQHIHHFLTPVTC
CCCCCEECCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]