| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
Click here to switch to the map view.
The map label for this gene is rhtA [H]
Identifier: 158336494
GI number: 158336494
Start: 3391056
End: 3393749
Strand: Reverse
Name: rhtA [H]
Synonym: AM1_3358
Alternate gene names: 158336494
Gene position: 3393749-3391056 (Counterclockwise)
Preceding gene: 158336496
Following gene: 158336493
Centisome position: 52.18
GC content: 48.37
Gene sequence:
>2694_bases ATGAATACTGGACCGTCTTTAAACATCATTTATATCTGTTTGGGTGCTCTGGGGACATCCCTAGGAACACTGGGTGCGGC CCAAGCAGCTCAGCCTCTGTCAAACCCTTTCCAGATTATCTCTGACCAGAGGGCTCGTAGGATCCGTAAAGTTGAATCTA TCGTTCTATATCCACATAAGTCCGAATATCGTGTTGCCCAAGTAGAGCCTCTATCCATTGCCGAAATTACGCAGGTGACC CTTGAGCCTACAGAGGGCGGGGTCAATATTGTGCTGACGGTTGCTAAAGGTGATACCTTGCAGGTGACGCCTTCCGATGA TGGGGCCACCTTTATCGCTGATATTGAGAATGCCCTACTCAATTTACCCACTGGGCAAACCTTTGAAGCAGACAACCCAA GCCCAGGTATACGCTCAGTCTCTGTCATGCCTGTTGATGTCAATCGCGTGCGGGTGACCGTAATTGGTGATCAGACAGAA TTAAGTCACCAAATTCAACCCGATTCTCAGACCCTCGTTTTCAGTATCAATACCCAGACGTTAGCTGAGGCGGAAGAACC CCCAGAGACTCCACCTGCGGATACTCCTGCAGATGAGGGTGAAGAAGATGATTTAGAAATTGTCGTCACAGCCACTCGGA CGGAAGAGCTCCTCGCAGATGTCCCCCGTGCTGTCACCATCATTACTCGCGAACAGATAGAGCAAGAAGCCCTGTTAAGG AATGACCTGACTTCAACCCTGGGTAAATTTGTGCCCGGCTTTGGACCACCAACAGCGAATGGTCGAACCCGTGTTCAAGA TTTGAGAGGTCGCCCTGCGCAAATTTTGATCGATGGCATCCCCCAAACTGGTAATGCCTCCTTTGACACAGAGTTGTCCG CCATTGATCCATCGGTTATTGAACGGATTGAAGTGGTCAGAGGACCTAGCGCAGTCTTTGGAGATGGTGCAACTGGTGGG GTTATTAATATTCTGACTCGTGCCCCCGTCGAAGAAGGGGTTCAAGGGCAATTAGGACTCACCCTTCGTCCCGATTTTGA ACATTTATCTGAGAATGGCTTTGGCTTCAAAGTGGATGCCAGTCTGTCAGGCAAGCAAGGAAAATTCGATTTTCTAGTTG GAGCAGCCTTGGACCTAGATGGTGCCATCTTTGATGGAGAAGGAGATCGAATTCCGCCCGATGGCTTAACCACAGACAAC AACACCTTTAACCTGTTTACAAAAGCGGGGGTTGATATCACTGAGGATCAGCGCCTACAACTCTCCTACAACTTCTTTCA AAACGATTTTGCTAGCGATTTCATTTCCGATCCGATTGTTTTAGGTATCCCAGGGGAGCAAGATGCTGAAGCCTTGAGAG TAGGACCGTTTACCTTTGATGACAGCCCATCCCAGGCTATCCATAATGTCAATTTGACCTATCGCCATCAAGACTTATTA GGTGCTGAATTACGGACTCAGGCTTACTTTCGGAAAACTGATCTAACTCAAATTCCAGGTGATATTCGTAATCTCTTTCC CATGGGGACACCCCCATTTTTGCCTGTCATTTCTCAAACTAATTTAGATTCTTTAGAGGTCGGTGGACGGTTTCAGCTCG ATACTCCCATTACAGATCGCTTCAAGATTCTGTGGGGTGCGGATCTTTCCTATGAAGAGAATGAGCAGTTTTTCAATTCC CTAGATCCAGTCGATTTTGATCTCAACCGCCGTGCCCGCATCATCGGTACGGCCACTCAATCCCCGTTTTATACCGTACG CAGCATCGGTGCTTTTTCCCAGTTAACCTGGGATGTGGTGGATCAGCTATCCCTCACCGGAGGGATTCGATATGAAAATA TTCGCTTGTCCGTCGATGACTATGCTGCTAGCCCTTTTGCGAATTTTGGGATTGCGCCACCGGCACAAATCCAAGGCGGA GTAATCACAACCGATGACGTGGTTTTTAATGCGGGTGCAGTGTTTAAAGCGACTGAAGAAGTTAGCATCTATACCAACTT TGCCCAAGGATTTTCGATTCCTGGTGTTGGGGTAACCCTAGGGCTAGCTCGATTTGGCAATAGCGTGGTTGACAGCCTCA ATTTAGAACCTCAGAAAGTCAATAACTATGAGCTGGGGGTAAAAGCCAACTTTGATACGGTTCAGCTAAGTCTAGCGGGC TTTTTGAGTACCTCCTCTCTTGGTTCTTCTCTAGTCGTTGATAACGTGGGGCTGACCTCTATTGTGCGGGCTCCACAACG GAACTATGGCATTGAATTCACTGCGGATTGGCAACCCAGCGATACATGGAAACTAGGGACAGTCTTTACTTGGAATGAGG GTGAATCGGATCCAGACGATGATGGTGTCTTTACAGCCCTTAGCTCCCTGGATGTCCAGCCCATTCACGCAACGGTCTAT GTTGAGAATGAGACCCTACCTGGTTGGCGAAACCGAATTCAAGCGTTGTTTGTCGGGGGACGAGATCGTGCCTTTAATGA CGCGATCGATCAGTTTCGAGTTGAAGGTTACACGGTGTTCGATGTCTTCAGTACGGTCAACCTAGGGCCAGGGAAACTGC AGCTCGCTATCCAAAATGTCTTTGATACCCAATATGTACCCGTGAGTTCCCAAGAACGCTTGGGTATTCAAGAGCTACGC CGTCTCCCCGGTCAAGGCCGGACTTATAGCATTCGCTATAGTTTTGAGTTTTAA
Upstream 100 bases:
>100_bases TGAGAAGAATTCTTAATAACTATCTAGCCAGCCCACCGTTGAACGTGGGTCATGGATATTCAAGAGCCTTTGCCATTTGC CGTCTGCAACCGTGTAGGGA
Downstream 100 bases:
>100_bases GTCCAGTTCAACCAGCACCTAGTTTCTTAGATTTTCAGTTTGGTGGGAGTTCATCATCATGTTGCTACTATGGCTAGTGC TAGCGATAAGCCTTGCAATC
Product: ferric aerobactin receptor
Products: NA
Alternate protein names: TonB-dependent siderophore receptor rhtA [H]
Number of amino acids: Translated: 897; Mature: 897
Protein sequence:
>897_residues MNTGPSLNIIYICLGALGTSLGTLGAAQAAQPLSNPFQIISDQRARRIRKVESIVLYPHKSEYRVAQVEPLSIAEITQVT LEPTEGGVNIVLTVAKGDTLQVTPSDDGATFIADIENALLNLPTGQTFEADNPSPGIRSVSVMPVDVNRVRVTVIGDQTE LSHQIQPDSQTLVFSINTQTLAEAEEPPETPPADTPADEGEEDDLEIVVTATRTEELLADVPRAVTIITREQIEQEALLR NDLTSTLGKFVPGFGPPTANGRTRVQDLRGRPAQILIDGIPQTGNASFDTELSAIDPSVIERIEVVRGPSAVFGDGATGG VINILTRAPVEEGVQGQLGLTLRPDFEHLSENGFGFKVDASLSGKQGKFDFLVGAALDLDGAIFDGEGDRIPPDGLTTDN NTFNLFTKAGVDITEDQRLQLSYNFFQNDFASDFISDPIVLGIPGEQDAEALRVGPFTFDDSPSQAIHNVNLTYRHQDLL GAELRTQAYFRKTDLTQIPGDIRNLFPMGTPPFLPVISQTNLDSLEVGGRFQLDTPITDRFKILWGADLSYEENEQFFNS LDPVDFDLNRRARIIGTATQSPFYTVRSIGAFSQLTWDVVDQLSLTGGIRYENIRLSVDDYAASPFANFGIAPPAQIQGG VITTDDVVFNAGAVFKATEEVSIYTNFAQGFSIPGVGVTLGLARFGNSVVDSLNLEPQKVNNYELGVKANFDTVQLSLAG FLSTSSLGSSLVVDNVGLTSIVRAPQRNYGIEFTADWQPSDTWKLGTVFTWNEGESDPDDDGVFTALSSLDVQPIHATVY VENETLPGWRNRIQALFVGGRDRAFNDAIDQFRVEGYTVFDVFSTVNLGPGKLQLAIQNVFDTQYVPVSSQERLGIQELR RLPGQGRTYSIRYSFEF
Sequences:
>Translated_897_residues MNTGPSLNIIYICLGALGTSLGTLGAAQAAQPLSNPFQIISDQRARRIRKVESIVLYPHKSEYRVAQVEPLSIAEITQVT LEPTEGGVNIVLTVAKGDTLQVTPSDDGATFIADIENALLNLPTGQTFEADNPSPGIRSVSVMPVDVNRVRVTVIGDQTE LSHQIQPDSQTLVFSINTQTLAEAEEPPETPPADTPADEGEEDDLEIVVTATRTEELLADVPRAVTIITREQIEQEALLR NDLTSTLGKFVPGFGPPTANGRTRVQDLRGRPAQILIDGIPQTGNASFDTELSAIDPSVIERIEVVRGPSAVFGDGATGG VINILTRAPVEEGVQGQLGLTLRPDFEHLSENGFGFKVDASLSGKQGKFDFLVGAALDLDGAIFDGEGDRIPPDGLTTDN NTFNLFTKAGVDITEDQRLQLSYNFFQNDFASDFISDPIVLGIPGEQDAEALRVGPFTFDDSPSQAIHNVNLTYRHQDLL GAELRTQAYFRKTDLTQIPGDIRNLFPMGTPPFLPVISQTNLDSLEVGGRFQLDTPITDRFKILWGADLSYEENEQFFNS LDPVDFDLNRRARIIGTATQSPFYTVRSIGAFSQLTWDVVDQLSLTGGIRYENIRLSVDDYAASPFANFGIAPPAQIQGG VITTDDVVFNAGAVFKATEEVSIYTNFAQGFSIPGVGVTLGLARFGNSVVDSLNLEPQKVNNYELGVKANFDTVQLSLAG FLSTSSLGSSLVVDNVGLTSIVRAPQRNYGIEFTADWQPSDTWKLGTVFTWNEGESDPDDDGVFTALSSLDVQPIHATVY VENETLPGWRNRIQALFVGGRDRAFNDAIDQFRVEGYTVFDVFSTVNLGPGKLQLAIQNVFDTQYVPVSSQERLGIQELR RLPGQGRTYSIRYSFEF >Mature_897_residues MNTGPSLNIIYICLGALGTSLGTLGAAQAAQPLSNPFQIISDQRARRIRKVESIVLYPHKSEYRVAQVEPLSIAEITQVT LEPTEGGVNIVLTVAKGDTLQVTPSDDGATFIADIENALLNLPTGQTFEADNPSPGIRSVSVMPVDVNRVRVTVIGDQTE LSHQIQPDSQTLVFSINTQTLAEAEEPPETPPADTPADEGEEDDLEIVVTATRTEELLADVPRAVTIITREQIEQEALLR NDLTSTLGKFVPGFGPPTANGRTRVQDLRGRPAQILIDGIPQTGNASFDTELSAIDPSVIERIEVVRGPSAVFGDGATGG VINILTRAPVEEGVQGQLGLTLRPDFEHLSENGFGFKVDASLSGKQGKFDFLVGAALDLDGAIFDGEGDRIPPDGLTTDN NTFNLFTKAGVDITEDQRLQLSYNFFQNDFASDFISDPIVLGIPGEQDAEALRVGPFTFDDSPSQAIHNVNLTYRHQDLL GAELRTQAYFRKTDLTQIPGDIRNLFPMGTPPFLPVISQTNLDSLEVGGRFQLDTPITDRFKILWGADLSYEENEQFFNS LDPVDFDLNRRARIIGTATQSPFYTVRSIGAFSQLTWDVVDQLSLTGGIRYENIRLSVDDYAASPFANFGIAPPAQIQGG VITTDDVVFNAGAVFKATEEVSIYTNFAQGFSIPGVGVTLGLARFGNSVVDSLNLEPQKVNNYELGVKANFDTVQLSLAG FLSTSSLGSSLVVDNVGLTSIVRAPQRNYGIEFTADWQPSDTWKLGTVFTWNEGESDPDDDGVFTALSSLDVQPIHATVY VENETLPGWRNRIQALFVGGRDRAFNDAIDQFRVEGYTVFDVFSTVNLGPGKLQLAIQNVFDTQYVPVSSQERLGIQELR RLPGQGRTYSIRYSFEF
Specific function: Receptor for the siderophore rhizobactin [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786798, Length=230, Percent_Identity=32.6086956521739, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1788478, Length=135, Percent_Identity=36.2962962962963, Blast_Score=65, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 97684; Mature: 97684
Theoretical pI: Translated: 4.12; Mature: 4.12
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTGPSLNIIYICLGALGTSLGTLGAAQAAQPLSNPFQIISDQRARRIRKVESIVLYPHK CCCCCCCEEEEEEEHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEEECCC SEYRVAQVEPLSIAEITQVTLEPTEGGVNIVLTVAKGDTLQVTPSDDGATFIADIENALL CCCEEEEECCCCCEEEEEEEEECCCCCEEEEEEEECCCEEEEECCCCCCEEEEEHHHHHE NLPTGQTFEADNPSPGIRSVSVMPVDVNRVRVTVIGDQTELSHQIQPDSQTLVFSINTQT ECCCCCEECCCCCCCCCEEEEEEEEECCEEEEEEECCCHHHCCCCCCCCCEEEEEECCHH LAEAEEPPETPPADTPADEGEEDDLEIVVTATRTEELLADVPRAVTIITREQIEQEALLR HHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHCCCCEEEEEEHHHHHHHHHHH NDLTSTLGKFVPGFGPPTANGRTRVQDLRGRPAQILIDGIPQTGNASFDTELSAIDPSVI HHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHH ERIEVVRGPSAVFGDGATGGVINILTRAPVEEGVQGQLGLTLRPDFEHLSENGFGFKVDA HHHHHHCCCCEEECCCCCCCCEEEEECCCHHHCCCCCEEEEECCCHHHHCCCCCCEEEEC SLSGKQGKFDFLVGAALDLDGAIFDGEGDRIPPDGLTTDNNTFNLFTKAGVDITEDQRLQ CCCCCCCCEEEEEEEEECCCCEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEE LSYNFFQNDFASDFISDPIVLGIPGEQDAEALRVGPFTFDDSPSQAIHNVNLTYRHQDLL EEEEHHHHHHHHHHHCCCEEEECCCCCCCCEEEECCCCCCCCHHHHHEECEEEEECHHHH GAELRTQAYFRKTDLTQIPGDIRNLFPMGTPPFLPVISQTNLDSLEVGGRFQLDTPITDR CHHHHHHHHHHHCCCHHCCCHHHHHCCCCCCCCEEEEECCCCCCEECCCEEEECCCCCCC FKILWGADLSYEENEQFFNSLDPVDFDLNRRARIIGTATQSPFYTVRSIGAFSQLTWDVV EEEEECCCCCCCCCHHHHHCCCCCCCCCCCCEEEEEECCCCCCEEHHHCCCHHHHHHHHH DQLSLTGGIRYENIRLSVDDYAASPFANFGIAPPAQIQGGVITTDDVVFNAGAVFKATEE HHHHHCCCEEEEEEEEEEHHCCCCCCCCCCCCCCCCCCCCEEEECCEEEECCCEEEECCE VSIYTNFAQGFSIPGVGVTLGLARFGNSVVDSLNLEPQKVNNYELGVKANFDTVQLSLAG EEEEEEHHCCCCCCCCHHHHHHHHHCCHHHHHCCCCCCCCCCEEEEEEECCCEEEEEEEH FLSTSSLGSSLVVDNVGLTSIVRAPQRNYGIEFTADWQPSDTWKLGTVFTWNEGESDPDD HHHHCCCCCEEEEECCCHHHHHHCCCCCCCEEEEECCCCCCCEEEEEEEEECCCCCCCCC DGVFTALSSLDVQPIHATVYVENETLPGWRNRIQALFVGGRDRAFNDAIDQFRVEGYTVF CCHHHHHHHCCCCEEEEEEEEECCCCCCHHHEEEEEEECCCCCHHHHHHHHHEECCEEEE DVFSTVNLGPGKLQLAIQNVFDTQYVPVSSQERLGIQELRRLPGQGRTYSIRYSFEF EEEHHCCCCCCEEEEEEEHHCCCEEECCCCHHCCCHHHHHHCCCCCCEEEEEEEECC >Mature Secondary Structure MNTGPSLNIIYICLGALGTSLGTLGAAQAAQPLSNPFQIISDQRARRIRKVESIVLYPHK CCCCCCCEEEEEEEHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEEECCC SEYRVAQVEPLSIAEITQVTLEPTEGGVNIVLTVAKGDTLQVTPSDDGATFIADIENALL CCCEEEEECCCCCEEEEEEEEECCCCCEEEEEEEECCCEEEEECCCCCCEEEEEHHHHHE NLPTGQTFEADNPSPGIRSVSVMPVDVNRVRVTVIGDQTELSHQIQPDSQTLVFSINTQT ECCCCCEECCCCCCCCCEEEEEEEEECCEEEEEEECCCHHHCCCCCCCCCEEEEEECCHH LAEAEEPPETPPADTPADEGEEDDLEIVVTATRTEELLADVPRAVTIITREQIEQEALLR HHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHCCCCEEEEEEHHHHHHHHHHH NDLTSTLGKFVPGFGPPTANGRTRVQDLRGRPAQILIDGIPQTGNASFDTELSAIDPSVI HHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHH ERIEVVRGPSAVFGDGATGGVINILTRAPVEEGVQGQLGLTLRPDFEHLSENGFGFKVDA HHHHHHCCCCEEECCCCCCCCEEEEECCCHHHCCCCCEEEEECCCHHHHCCCCCCEEEEC SLSGKQGKFDFLVGAALDLDGAIFDGEGDRIPPDGLTTDNNTFNLFTKAGVDITEDQRLQ CCCCCCCCEEEEEEEEECCCCEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEE LSYNFFQNDFASDFISDPIVLGIPGEQDAEALRVGPFTFDDSPSQAIHNVNLTYRHQDLL EEEEHHHHHHHHHHHCCCEEEECCCCCCCCEEEECCCCCCCCHHHHHEECEEEEECHHHH GAELRTQAYFRKTDLTQIPGDIRNLFPMGTPPFLPVISQTNLDSLEVGGRFQLDTPITDR CHHHHHHHHHHHCCCHHCCCHHHHHCCCCCCCCEEEEECCCCCCEECCCEEEECCCCCCC FKILWGADLSYEENEQFFNSLDPVDFDLNRRARIIGTATQSPFYTVRSIGAFSQLTWDVV EEEEECCCCCCCCCHHHHHCCCCCCCCCCCCEEEEEECCCCCCEEHHHCCCHHHHHHHHH DQLSLTGGIRYENIRLSVDDYAASPFANFGIAPPAQIQGGVITTDDVVFNAGAVFKATEE HHHHHCCCEEEEEEEEEEHHCCCCCCCCCCCCCCCCCCCCEEEECCEEEECCCEEEECCE VSIYTNFAQGFSIPGVGVTLGLARFGNSVVDSLNLEPQKVNNYELGVKANFDTVQLSLAG EEEEEEHHCCCCCCCCHHHHHHHHHCCHHHHHCCCCCCCCCCEEEEEEECCCEEEEEEEH FLSTSSLGSSLVVDNVGLTSIVRAPQRNYGIEFTADWQPSDTWKLGTVFTWNEGESDPDD HHHHCCCCCEEEEECCCHHHHHHCCCCCCCEEEEECCCCCCCEEEEEEEEECCCCCCCCC DGVFTALSSLDVQPIHATVYVENETLPGWRNRIQALFVGGRDRAFNDAIDQFRVEGYTVF CCHHHHHHHCCCCEEEEEEEEECCCCCCHHHEEEEEEECCCCCHHHHHHHHHEECCEEEE DVFSTVNLGPGKLQLAIQNVFDTQYVPVSSQERLGIQELRRLPGQGRTYSIRYSFEF EEEHHCCCCCCEEEEEEEHHCCCEEECCCCHHCCCHHHHHHCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11274118; 11481432 [H]