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The map label for this gene is gatC

Identifier: 158336468

GI number: 158336468

Start: 3366639

End: 3366929

Strand: Direct

Name: gatC

Synonym: AM1_3332

Alternate gene names: 158336468

Gene position: 3366639-3366929 (Clockwise)

Preceding gene: 158336465

Following gene: 158336469

Centisome position: 51.76

GC content: 49.14

Gene sequence:

>291_bases
ATGCTGGAGCGTGCAGAAGTCGATAAAGTTGCCCATCTGGCCCGCCTATCCCTCACGGATGCTGAATCAGAACAGTTCAC
TACTCAGTTGGGGGATATACTCGACTATTTTGAGCAATTGAGCGAGCTAGATGTGGCGGAGGTAGAGCCAACCACCCGAG
CCATTGACGTTAGCAATGTCACCCGTGTTGATCATCTGACTCCCTATGATGATCGAGAGTCTATTCTGGCCTGTGCTCCA
GACCAAGAAGATGAGTATTTCAAAGTGCCCAAAATCATGGGTGAAAGTTGA

Upstream 100 bases:

>100_bases
AGTCTATATTTGCGTCGCGCTAAGATTAAGTGAGTTAACTGCCAATCGCTGTGGGACACTCTATAGAAGTCACAGCTAGC
ATTACATAGGAGATGCCTTC

Downstream 100 bases:

>100_bases
TTGGCCAGCGGGTTGACTTCCGAATCGTTGCCCTTTCTCACAAAAATATTTGAATTCCTGGATTAGAGATCTGTACCATA
GGTAAGGACATACTTCTCCT

Product: aspartyl/glutamyl-tRNA amidotransferase subunit C

Products: NA

Alternate protein names: Asp/Glu-ADT subunit C

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MLERAEVDKVAHLARLSLTDAESEQFTTQLGDILDYFEQLSELDVAEVEPTTRAIDVSNVTRVDHLTPYDDRESILACAP
DQEDEYFKVPKIMGES

Sequences:

>Translated_96_residues
MLERAEVDKVAHLARLSLTDAESEQFTTQLGDILDYFEQLSELDVAEVEPTTRAIDVSNVTRVDHLTPYDDRESILACAP
DQEDEYFKVPKIMGES
>Mature_96_residues
MLERAEVDKVAHLARLSLTDAESEQFTTQLGDILDYFEQLSELDVAEVEPTTRAIDVSNVTRVDHLTPYDDRESILACAP
DQEDEYFKVPKIMGES

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:
GO:0000166: Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
GO:0005524: Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
GO:0006412: Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
GO:0006450: Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
GO:0016874: Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GATC_ACAM1 (B0BZ26)

Other databases:

- EMBL:   CP000828
- RefSeq:   YP_001517642.1
- ProteinModelPortal:   B0BZ26
- SMR:   B0BZ26
- GeneID:   5682140
- GenomeReviews:   CP000828_GR
- KEGG:   amr:AM1_3332
- HOGENOM:   HBG586403
- OMA:   KDVAYIA
- BioCyc:   AMAR329726:AM1_3332-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00122
- InterPro:   IPR003837
- TIGRFAMs:   TIGR00135

Pfam domain/function: PF02686 Glu-tRNAGln

EC number: 6.3.5.-

Molecular weight: Translated: 10875; Mature: 10875

Theoretical pI: Translated: 3.91; Mature: 3.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLERAEVDKVAHLARLSLTDAESEQFTTQLGDILDYFEQLSELDVAEVEPTTRAIDVSNV
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCC
TRVDHLTPYDDRESILACAPDQEDEYFKVPKIMGES
CCCCCCCCCCCCCCEEEECCCCCCCEEECCHHCCCC
>Mature Secondary Structure
MLERAEVDKVAHLARLSLTDAESEQFTTQLGDILDYFEQLSELDVAEVEPTTRAIDVSNV
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCC
TRVDHLTPYDDRESILACAPDQEDEYFKVPKIMGES
CCCCCCCCCCCCCCEEEECCCCCCCEEECCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA