Click here to switch to the map view.

The map label for this gene is 158336394

Identifier: 158336394

GI number: 158336394

Start: 3290712

End: 3291179

Strand: Reverse

Name: 158336394

Synonym: AM1_3256

Alternate gene names: NA

Gene position: 3291179-3290712 (Counterclockwise)

Preceding gene: 158336397

Following gene: 158336393

Centisome position: 50.6

GC content: 46.37

Gene sequence:

>468_bases
ATGACAGCAGCCATTAGGAATCTCCCCAATACTGATAACTGGGAGGTTTTGGCACAAGAGGGGCAATCGAGATCCGATTT
GACCGGCCCTTTTGAACAGATCAAATCATCCGTTGACAGTAAGTTGTTGGGGCAGGTCAATCTATTTCAGGTAGGCAACA
AATATGTGCGCGAAGGAGGAAGCATTACCTTATCATCAGGCTATTTGGCACAACACCCAATGGAGGGGGGAGCAGCGATC
AGCCTCGTTAATGCCGCTCTAGATGCGTTCGCGAAAGCAGCTGCGTTCGAATTAGGTTCAAGCCTAAGAGTGAACACCGT
TAGTCCTCGATTTGTAAAAGAAACTATGGAAAAAATGGGTATGGATAGTTCAAGCGGGATCTCAGCAACAGATACGGCTA
AAGCTTATAAGTACGCCGTAGAAATCAGTGAATTCGGTCAGGCTTTTGACGTTGCGGATTACCTTTAA

Upstream 100 bases:

>100_bases
GCCTGATTGAAACCCTGTTTTGGTGGACAGTTTGCACTGAGGCGGCTGGCCAACAGCCGATGGTACATCGGTTTTAAGAG
CATTTTCGAAGTCATTTGTA

Downstream 100 bases:

>100_bases
AATACGACTCACAACTCAGCCCAGTGACATCGCATCTGCAATCGTATCTCTATTGCGTGAAGCAAAGCGCTGATCCATAG
CTAATCCACTTTCTCTTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: Short-Chain Dehydrogenase/Reductase SDR; NAD-Dependent Epimerase/Dehydratase; Oxidoreductase; Aklaviketone Reductase; Short Chain Dehydrogenase Family Protein; Dehydrogenases With Different Specificities; Oxidoreductase Short Chain Dehydrogenase/Reductase Family

Number of amino acids: Translated: 155; Mature: 154

Protein sequence:

>155_residues
MTAAIRNLPNTDNWEVLAQEGQSRSDLTGPFEQIKSSVDSKLLGQVNLFQVGNKYVREGGSITLSSGYLAQHPMEGGAAI
SLVNAALDAFAKAAAFELGSSLRVNTVSPRFVKETMEKMGMDSSSGISATDTAKAYKYAVEISEFGQAFDVADYL

Sequences:

>Translated_155_residues
MTAAIRNLPNTDNWEVLAQEGQSRSDLTGPFEQIKSSVDSKLLGQVNLFQVGNKYVREGGSITLSSGYLAQHPMEGGAAI
SLVNAALDAFAKAAAFELGSSLRVNTVSPRFVKETMEKMGMDSSSGISATDTAKAYKYAVEISEFGQAFDVADYL
>Mature_154_residues
TAAIRNLPNTDNWEVLAQEGQSRSDLTGPFEQIKSSVDSKLLGQVNLFQVGNKYVREGGSITLSSGYLAQHPMEGGAAIS
LVNAALDAFAKAAAFELGSSLRVNTVSPRFVKETMEKMGMDSSSGISATDTAKAYKYAVEISEFGQAFDVADYL

Specific function: Unknown

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16568; Mature: 16437

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAAIRNLPNTDNWEVLAQEGQSRSDLTGPFEQIKSSVDSKLLGQVNLFQVGNKYVREGG
CCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
SITLSSGYLAQHPMEGGAAISLVNAALDAFAKAAAFELGSSLRVNTVSPRFVKETMEKMG
CEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHC
MDSSSGISATDTAKAYKYAVEISEFGQAFDVADYL
CCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCC
>Mature Secondary Structure 
TAAIRNLPNTDNWEVLAQEGQSRSDLTGPFEQIKSSVDSKLLGQVNLFQVGNKYVREGG
CCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
SITLSSGYLAQHPMEGGAAISLVNAALDAFAKAAAFELGSSLRVNTVSPRFVKETMEKMG
CEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHC
MDSSSGISATDTAKAYKYAVEISEFGQAFDVADYL
CCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA