| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is fur [H]
Identifier: 158336305
GI number: 158336305
Start: 3196390
End: 3196797
Strand: Reverse
Name: fur [H]
Synonym: AM1_3167
Alternate gene names: 158336305
Gene position: 3196797-3196390 (Counterclockwise)
Preceding gene: 158336308
Following gene: 158336304
Centisome position: 49.15
GC content: 43.87
Gene sequence:
>408_bases ATGAAATCGCACCTTACTCGTAGTCAAAATACCGTTCTCAAACTTTTAAAGAAGTTGAATCGAGAGATTTCAGCTCAAGA ACTTTATCTTGAGTTGCGCAAAGCCCAACTAACCTTGGGGCTAGCCACGGTTTATCGAGCATTAGATACTCTCAAGCTCA GCGGTATCGTCCAAGCAAGGCTACTGAGCAATGGTGAAACCCTGTATACCGCTGCTCAACAAGATAGACATCATGTTACT TGTCTACAATGCGGTGTTTCGATTCCCATCCAGGAAGAAGAATGTCCCGTTCATGAATTGGAAGATCAGCTCAAACAATC CTCAAAGTTCGAAATTTTCTACCATACGCTAGAGTTTTTCGGCCTTTGCACGCCATGCCAACTCGAACAGTCGCATTCAA AGCCTTAG
Upstream 100 bases:
>100_bases GGAGCGCTCTCAATCATGTCTATCGATAGGCAATCGAGAATTTGAAGCACCCCATTCTCACCCCTTGACCATTGCATCAT CAGCTATTGATGCCCTTTTC
Downstream 100 bases:
>100_bases ATCTCTGAAGCGACTCATGCACGACATGGAATAGGATTTTTGCCCCATCAGACAATATAAAAGTTAAGATTTTTGTGGGT TTATTAAGGATTTGGTGTCA
Product: ferric uptake regulation protein
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MKSHLTRSQNTVLKLLKKLNREISAQELYLELRKAQLTLGLATVYRALDTLKLSGIVQARLLSNGETLYTAAQQDRHHVT CLQCGVSIPIQEEECPVHELEDQLKQSSKFEIFYHTLEFFGLCTPCQLEQSHSKP
Sequences:
>Translated_135_residues MKSHLTRSQNTVLKLLKKLNREISAQELYLELRKAQLTLGLATVYRALDTLKLSGIVQARLLSNGETLYTAAQQDRHHVT CLQCGVSIPIQEEECPVHELEDQLKQSSKFEIFYHTLEFFGLCTPCQLEQSHSKP >Mature_135_residues MKSHLTRSQNTVLKLLKKLNREISAQELYLELRKAQLTLGLATVYRALDTLKLSGIVQARLLSNGETLYTAAQQDRHHVT CLQCGVSIPIQEEECPVHELEDQLKQSSKFEIFYHTLEFFGLCTPCQLEQSHSKP
Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes. Regulates the expression of the fbp protein [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
None
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 15411; Mature: 15411
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSHLTRSQNTVLKLLKKLNREISAQELYLELRKAQLTLGLATVYRALDTLKLSGIVQAR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLSNGETLYTAAQQDRHHVTCLQCGVSIPIQEEECPVHELEDQLKQSSKFEIFYHTLEFF HHCCCCEEEEECCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHH GLCTPCQLEQSHSKP CCCCCCCCCCCCCCC >Mature Secondary Structure MKSHLTRSQNTVLKLLKKLNREISAQELYLELRKAQLTLGLATVYRALDTLKLSGIVQAR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLSNGETLYTAAQQDRHHVTCLQCGVSIPIQEEECPVHELEDQLKQSSKFEIFYHTLEFF HHCCCCEEEEECCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHH GLCTPCQLEQSHSKP CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8406856 [H]