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The map label for this gene is tuaB [H]

Identifier: 158336308

GI number: 158336308

Start: 3199573

End: 3200976

Strand: Reverse

Name: tuaB [H]

Synonym: AM1_3170

Alternate gene names: 158336308

Gene position: 3200976-3199573 (Counterclockwise)

Preceding gene: 158336314

Following gene: 158336305

Centisome position: 49.22

GC content: 47.36

Gene sequence:

>1404_bases
ATGGACATGAAAAAGGGCGACCCATGCATTGCCCCCATTCAACCCCAATCTATGGCATCCCTCAAAAAGTTGGTTATTCG
TGGCACCCTGTGGACTTTGATCGGGTATGGCGGCAGTCAAGGTCTGCGATTCGGTGGCAATCTTATTCTGACTCGACTTC
TATACCCAGACCTCTTCGGGTTAATGGCCCTCACCAATATTTTTATTATTGGCCTCCAACTCTTTTCAGATCTGGGAACC
GGCTGGAGTGTGGTCCAAAATAAGCGGGGCGACGATCCGGTCTTTCTCAATACAGCCTGGACCGTTGATGTCATTCGTGG
GTTCATTCTCTGGTTCGGCTGCTTAGTGATTGCCTGGCCCATTGCCACCCTATACAAGCATCCAGAATTGCTATGGCTGA
TTCCCATTGTCGGCATCACCACCATTTTCTCAGGCTTTGAATCAACTGCGGTTGCTCAGCTCGAACGGAATCTGGACGTC
CAGAAACAAGTGGTGTTTGAACTGACAACCCAAGCAGTCGGCATCATCATCATGATTGTGTGGGCAATGATTGCCCCTAG
TATTTGGGCGCTCGTGATGGGGGGACTGGCCTCTACAGGTCTGAAAATGGTTTGGAGTCACTTTCTTTTCCCTGGCTCCA
GCAACCAATTTGCCTGGGACAAAGCAGCCCTTAAAGATCTGCTCAACTTGGGTCGGTGGATATTTCTCAATACAGCCCTC
ACGTTTCTAGCTGAGCAAGCTGACCGACTGATGCTGGGTGATCTATTTTCCCTACGATTATTAGGTATTTACGGAATTGC
ATTCACCCTTAGCGATATGCCCTATAAGGTGGTGATGAGCATCAGCAATAAGGTAATTTTTCCCGCCATCAGTAAAAGTA
TTGATCAACCTCGGGACATTCTATTTCCCAAGATCCTTAAGAATCGACGTCCTTTTCTATTTGCCTCTATTTTTTTAGTG
GTGGTTTTAGCAGGGTTTGGGGATCTGCTGATTACGACCCTCTATGACACTCGCTATCTCGATGCTTCCTGGATGCTTCC
TATCTTGGCTTTGGGGATTTGGCCTCGTCTGCTCTCCCAAACCAATGAATCCTACTTATTCGCCATCGGCAAATTTCAAT
ACACCACCTGCGGCAACATCTTGCGCCTTTCCTGCACCGTCATGGGTATCTGGATTGGTTTTCGGTATTTTGGCAATGCG
GGGGCAATTATGGGAGTAGCCCTAAATGATTTTTTCTACTACCTTTCCGTCAATTACGGTCTGCTAAGAGAAGGCTTAAA
TGGCATGATGCAGGATTTGCTGGCAACATTCCTATTGCTAGGATGTTTGACACTCATTATTGCGGTTCGTCTTCACTTTA
ATCTCGACTTACCGATTCATTCACTGTTCTCACAGCCAGCCTGA

Upstream 100 bases:

>100_bases
CTTTACCCGTCATCTTGACATAGGTCTCTTCTCTCTCCATCCATGATGCTGTGGGTGTTGTTTTACTCACAAAACCATCG
CCTTCTCTATAGCCAGCATC

Downstream 100 bases:

>100_bases
TCACAGGTATTCATCCCACCCCAGTAATTCCTTGAGATTAGCTTTCTTGAATACCCTTTGCTCTGCTTCTAGATTTTGGC
AAGGACTGTGGGAGTAGAGA

Product: polysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 467; Mature: 467

Protein sequence:

>467_residues
MDMKKGDPCIAPIQPQSMASLKKLVIRGTLWTLIGYGGSQGLRFGGNLILTRLLYPDLFGLMALTNIFIIGLQLFSDLGT
GWSVVQNKRGDDPVFLNTAWTVDVIRGFILWFGCLVIAWPIATLYKHPELLWLIPIVGITTIFSGFESTAVAQLERNLDV
QKQVVFELTTQAVGIIIMIVWAMIAPSIWALVMGGLASTGLKMVWSHFLFPGSSNQFAWDKAALKDLLNLGRWIFLNTAL
TFLAEQADRLMLGDLFSLRLLGIYGIAFTLSDMPYKVVMSISNKVIFPAISKSIDQPRDILFPKILKNRRPFLFASIFLV
VVLAGFGDLLITTLYDTRYLDASWMLPILALGIWPRLLSQTNESYLFAIGKFQYTTCGNILRLSCTVMGIWIGFRYFGNA
GAIMGVALNDFFYYLSVNYGLLREGLNGMMQDLLATFLLLGCLTLIIAVRLHFNLDLPIHSLFSQPA

Sequences:

>Translated_467_residues
MDMKKGDPCIAPIQPQSMASLKKLVIRGTLWTLIGYGGSQGLRFGGNLILTRLLYPDLFGLMALTNIFIIGLQLFSDLGT
GWSVVQNKRGDDPVFLNTAWTVDVIRGFILWFGCLVIAWPIATLYKHPELLWLIPIVGITTIFSGFESTAVAQLERNLDV
QKQVVFELTTQAVGIIIMIVWAMIAPSIWALVMGGLASTGLKMVWSHFLFPGSSNQFAWDKAALKDLLNLGRWIFLNTAL
TFLAEQADRLMLGDLFSLRLLGIYGIAFTLSDMPYKVVMSISNKVIFPAISKSIDQPRDILFPKILKNRRPFLFASIFLV
VVLAGFGDLLITTLYDTRYLDASWMLPILALGIWPRLLSQTNESYLFAIGKFQYTTCGNILRLSCTVMGIWIGFRYFGNA
GAIMGVALNDFFYYLSVNYGLLREGLNGMMQDLLATFLLLGCLTLIIAVRLHFNLDLPIHSLFSQPA
>Mature_467_residues
MDMKKGDPCIAPIQPQSMASLKKLVIRGTLWTLIGYGGSQGLRFGGNLILTRLLYPDLFGLMALTNIFIIGLQLFSDLGT
GWSVVQNKRGDDPVFLNTAWTVDVIRGFILWFGCLVIAWPIATLYKHPELLWLIPIVGITTIFSGFESTAVAQLERNLDV
QKQVVFELTTQAVGIIIMIVWAMIAPSIWALVMGGLASTGLKMVWSHFLFPGSSNQFAWDKAALKDLLNLGRWIFLNTAL
TFLAEQADRLMLGDLFSLRLLGIYGIAFTLSDMPYKVVMSISNKVIFPAISKSIDQPRDILFPKILKNRRPFLFASIFLV
VVLAGFGDLLITTLYDTRYLDASWMLPILALGIWPRLLSQTNESYLFAIGKFQYTTCGNILRLSCTVMGIWIGFRYFGNA
GAIMGVALNDFFYYLSVNYGLLREGLNGMMQDLLATFLLLGCLTLIIAVRLHFNLDLPIHSLFSQPA

Specific function: Might be involved in the translocation of teichuronic acid repeating units from the inner to the outer surface of the membrane [H]

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002797 [H]

Pfam domain/function: PF01943 Polysacc_synt [H]

EC number: NA

Molecular weight: Translated: 52131; Mature: 52131

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10048024; 9384377 [H]