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The map label for this gene is glyQ

Identifier: 158336301

GI number: 158336301

Start: 3192891

End: 3193772

Strand: Reverse

Name: glyQ

Synonym: AM1_3163

Alternate gene names: 158336301

Gene position: 3193772-3192891 (Counterclockwise)

Preceding gene: 158336302

Following gene: 158336300

Centisome position: 49.11

GC content: 49.09

Gene sequence:

>882_bases
GTGAATTTTCAATCCGTTATTGCCAAACTCCACGAATTTTGGAGCGATCGCGGTTGTCTAATTGTTCAGCCCTACGACAT
TGAAAAAGGGGCAGGCACCAAAAGCCCCCATACCTTTTTAAGATCCCTAGGGCCAGAACCCTGGGCTGTAGCCTACGTCG
AACCCTGCCGTCGCCCCGCCGATGGTCGCTACGGCGAAAACCCTAATCGATATCAGTACTACTACCAATACCAAGTCTTG
GTCAAACCCTCCCCCGATGATATCCAAGATATTTATCTCGACTCCTTACGAGTCCTTGGCATTCAGCCTGAAGATCATGA
TATTCGCTTTGTCGAAGACAATTGGGAAGATGCCGCCGTGGGCGCATGGGGTGTCGGCTGGGAAGTCTGGCTAGATGGTA
TGGAAGTCACTCAGTTTACCTACTTCCAACAGTGCGGTGGTTTAGATTGCCGCCCTGTCTCCATTGAACTCACCTATGGT
CTAGAACGACTGACCATGTACCTGCAGGAAACCGATGCCATCGCCAAAATCGACTGGAACGGTACTCTCACCTATGGAGA
TGTTCATCTGCAAGGGGAAATTGAACAATCCACCTATAATTTCGAAGCCTCTAACCCCGAACTGCTGTTTCAGCTCTTTA
GTTTGTATGAACAAGAAGCCCTGCAACTGATCGAGAAACAATTAGTCTTACCCGGGTTAGACTATGTGCTCAAATGCTCC
CACACCTTCAACCTCTTAGATGCCAGAGGCGTTATTTCCGTGACCGAACGGACTCGCTATATTGGCCGCATTCGCCAAAT
GGCCCGCCAAGTAGCCCAACTCTATCTTCAGCAACGTGAAGAATTAGGATTCCCTTTACTGAAAACGCAATCCGTCTCCT
AA

Upstream 100 bases:

>100_bases
CTTCCTATTCCATGGGAGGAGTTCTAAAAAAAGCGACCAAAATGTAAACGAGCCTCGTAGACTAGGTAACTGACACCCAT
CTACAAACAGGTCAAGCGCT

Downstream 100 bases:

>100_bases
AATTCGGTAAGCACGAGGGGAATCTTCCCTTCCAATTAGTGATATCGATATTGGAGGCAGATTTTGAGTCTAGGGAAATG
GATTGGCTTAGTTGTCTTCT

Product: glycyl-tRNA synthetase subunit alpha

Products: NA

Alternate protein names: Glycine--tRNA ligase alpha subunit; GlyRS

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MNFQSVIAKLHEFWSDRGCLIVQPYDIEKGAGTKSPHTFLRSLGPEPWAVAYVEPCRRPADGRYGENPNRYQYYYQYQVL
VKPSPDDIQDIYLDSLRVLGIQPEDHDIRFVEDNWEDAAVGAWGVGWEVWLDGMEVTQFTYFQQCGGLDCRPVSIELTYG
LERLTMYLQETDAIAKIDWNGTLTYGDVHLQGEIEQSTYNFEASNPELLFQLFSLYEQEALQLIEKQLVLPGLDYVLKCS
HTFNLLDARGVISVTERTRYIGRIRQMARQVAQLYLQQREELGFPLLKTQSVS

Sequences:

>Translated_293_residues
MNFQSVIAKLHEFWSDRGCLIVQPYDIEKGAGTKSPHTFLRSLGPEPWAVAYVEPCRRPADGRYGENPNRYQYYYQYQVL
VKPSPDDIQDIYLDSLRVLGIQPEDHDIRFVEDNWEDAAVGAWGVGWEVWLDGMEVTQFTYFQQCGGLDCRPVSIELTYG
LERLTMYLQETDAIAKIDWNGTLTYGDVHLQGEIEQSTYNFEASNPELLFQLFSLYEQEALQLIEKQLVLPGLDYVLKCS
HTFNLLDARGVISVTERTRYIGRIRQMARQVAQLYLQQREELGFPLLKTQSVS
>Mature_293_residues
MNFQSVIAKLHEFWSDRGCLIVQPYDIEKGAGTKSPHTFLRSLGPEPWAVAYVEPCRRPADGRYGENPNRYQYYYQYQVL
VKPSPDDIQDIYLDSLRVLGIQPEDHDIRFVEDNWEDAAVGAWGVGWEVWLDGMEVTQFTYFQQCGGLDCRPVSIELTYG
LERLTMYLQETDAIAKIDWNGTLTYGDVHLQGEIEQSTYNFEASNPELLFQLFSLYEQEALQLIEKQLVLPGLDYVLKCS
HTFNLLDARGVISVTERTRYIGRIRQMARQVAQLYLQQREELGFPLLKTQSVS

Specific function: Unknown

COG id: COG0752

COG function: function code J; Glycyl-tRNA synthetase, alpha subunit

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family

Homologues:

Organism=Escherichia coli, GI1789983, Length=291, Percent_Identity=60.4810996563574, Blast_Score=371, Evalue=1e-104,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SYGA_ACAM1 (B0CEQ4)

Other databases:

- EMBL:   CP000828
- RefSeq:   YP_001517475.1
- ProteinModelPortal:   B0CEQ4
- SMR:   B0CEQ4
- GeneID:   5681971
- GenomeReviews:   CP000828_GR
- KEGG:   amr:AM1_3163
- HOGENOM:   HBG285316
- OMA:   CRRPTDG
- ProtClustDB:   PRK09348
- BioCyc:   AMAR329726:AM1_3163-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00254
- InterPro:   IPR006194
- InterPro:   IPR002310
- PRINTS:   PR01044
- TIGRFAMs:   TIGR00388

Pfam domain/function: PF02091 tRNA-synt_2e

EC number: =6.1.1.14

Molecular weight: Translated: 33859; Mature: 33859

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: PS50861 AA_TRNA_LIGASE_II_GLYAB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFQSVIAKLHEFWSDRGCLIVQPYDIEKGAGTKSPHTFLRSLGPEPWAVAYVEPCRRPA
CCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHCCCCCEEEEEEHHCCCCC
DGRYGENPNRYQYYYQYQVLVKPSPDDIQDIYLDSLRVLGIQPEDHDIRFVEDNWEDAAV
CCCCCCCCCCEEEEEEEEEEEECCCCHHHHHHHCCEEEEECCCCCCCEEEEECCCCCCCC
GAWGVGWEVWLDGMEVTQFTYFQQCGGLDCRPVSIELTYGLERLTMYLQETDAIAKIDWN
CCCCCCHHHEECCCHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHHCCCEEEEECC
GTLTYGDVHLQGEIEQSTYNFEASNPELLFQLFSLYEQEALQLIEKQLVLPGLDYVLKCS
CEEEEEEEEEEEEEECCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEC
HTFNLLDARGVISVTERTRYIGRIRQMARQVAQLYLQQREELGFPLLKTQSVS
CCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCC
>Mature Secondary Structure
MNFQSVIAKLHEFWSDRGCLIVQPYDIEKGAGTKSPHTFLRSLGPEPWAVAYVEPCRRPA
CCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHCCCCCEEEEEEHHCCCCC
DGRYGENPNRYQYYYQYQVLVKPSPDDIQDIYLDSLRVLGIQPEDHDIRFVEDNWEDAAV
CCCCCCCCCCEEEEEEEEEEEECCCCHHHHHHHCCEEEEECCCCCCCEEEEECCCCCCCC
GAWGVGWEVWLDGMEVTQFTYFQQCGGLDCRPVSIELTYGLERLTMYLQETDAIAKIDWN
CCCCCCHHHEECCCHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHHCCCEEEEECC
GTLTYGDVHLQGEIEQSTYNFEASNPELLFQLFSLYEQEALQLIEKQLVLPGLDYVLKCS
CEEEEEEEEEEEEEECCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEC
HTFNLLDARGVISVTERTRYIGRIRQMARQVAQLYLQQREELGFPLLKTQSVS
CCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA