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The map label for this gene is perM [H]

Identifier: 158336300

GI number: 158336300

Start: 3191667

End: 3192827

Strand: Reverse

Name: perM [H]

Synonym: AM1_3162

Alternate gene names: 158336300

Gene position: 3192827-3191667 (Counterclockwise)

Preceding gene: 158336301

Following gene: 158336299

Centisome position: 49.09

GC content: 48.66

Gene sequence:

>1161_bases
TTGAGTCTAGGGAAATGGATTGGCTTAGTTGTCTTCTTGGTTTCTCTCTACATTTTGTGGGAAATTCGCCAAGTCTTGCT
GTTAGGATTTACGGCGGTCGTACTCGCCTCTGCACTCAATGGCCTGGTTCGCCAACTGACGAAGCGGGGCCTGAGTCGCG
GACTAGCCGTTGCCTCAGCCATCTTTTCCATTGTGGGTGTGGCCTGTTTGATCGGACTCTTGGTGATCCCGCCTTTTGTC
ACTCAAGCCCAAGAGTTGCTAGATCGTGTGCCCGATAGTTTGACTCGCATTGAAGAACTCATCAATGAAGCTCAAGAAAC
TGGCTTAGCCTTTGGCATGCCCAGCGCTGGTATCGAAATTCCGGTTGATTCTCTAATCGACAACCTACGGGAAAAGATTC
CCGCGTTTGCCGAAAGCGTTGTCAATAACTTTTTTGCCTTATTTTCCAATTCCCTTTTGGTGGCCCTGAATATCCTCCTC
ATTCTGGTGTTAACCATTATGTTCTTGGTTGACCCCGACCAATATCGCCGCATTTTTATCCGACTGTTTCCGTCCTTTTA
TCGGCGACGGGTCGATTACATCTTGGGATTATGTGACTCTGCTTTAGATAACTGGATTGTGGGCATTTTGTTCAATATGA
CGGTGATTGCCGTCTTTAGCGGCTTGGGACTGTGGGTATTAGGGGTTGATCTGGTACTTGCCAATGCCTTGATTGCTGGT
CTGCTAGAAGCCATTCCCAACATAGGCCCGACCCTTAGCTTGATACCACCCATGGCCATTGCTCTACTTGATGCACCCTG
GAAAGCTGTTGCCGTGCTGATCCTTTACATTCTGATTCAGCAGTTAGAGCAGTATTTGTTAGTGCCTGCCGTGATGGCCA
AACAACTCTCCCTAGCACCTGCCGTCACTTTACTGTCTCAAATTGTATTCGCCATTTTCTTTGGATTTCTGGGACTCCTG
TTGGCTCTGCCACTGATGGTGATCGGCCAAATTTGGGTAAAAGAAGTGCTGGTCAAAGATATTTTGGATCGCTGGGGCGA
AGACGAGCGCTCCGATTCCTATCCCACCTTTGCACCAGATATCGTTGCCTTAGCCGATGGCCCTACTCAATTGTCCGCTG
ATTTACCAACTGTAACGCCGGATGAGGAAGAATCCAGCTAG

Upstream 100 bases:

>100_bases
AGGATTCCCTTTACTGAAAACGCAATCCGTCTCCTAAAATTCGGTAAGCACGAGGGGAATCTTCCCTTCCAATTAGTGAT
ATCGATATTGGAGGCAGATT

Downstream 100 bases:

>100_bases
AATCGATCAGCATTATGGCCGTCTTGGCTAAGTTACGTCTAGGAAATCCAACCATGAGTTTAAATTTAGTTAGCCTAGTG
GGTCGTGCAGGCATGGACCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 385

Protein sequence:

>386_residues
MSLGKWIGLVVFLVSLYILWEIRQVLLLGFTAVVLASALNGLVRQLTKRGLSRGLAVASAIFSIVGVACLIGLLVIPPFV
TQAQELLDRVPDSLTRIEELINEAQETGLAFGMPSAGIEIPVDSLIDNLREKIPAFAESVVNNFFALFSNSLLVALNILL
ILVLTIMFLVDPDQYRRIFIRLFPSFYRRRVDYILGLCDSALDNWIVGILFNMTVIAVFSGLGLWVLGVDLVLANALIAG
LLEAIPNIGPTLSLIPPMAIALLDAPWKAVAVLILYILIQQLEQYLLVPAVMAKQLSLAPAVTLLSQIVFAIFFGFLGLL
LALPLMVIGQIWVKEVLVKDILDRWGEDERSDSYPTFAPDIVALADGPTQLSADLPTVTPDEEESS

Sequences:

>Translated_386_residues
MSLGKWIGLVVFLVSLYILWEIRQVLLLGFTAVVLASALNGLVRQLTKRGLSRGLAVASAIFSIVGVACLIGLLVIPPFV
TQAQELLDRVPDSLTRIEELINEAQETGLAFGMPSAGIEIPVDSLIDNLREKIPAFAESVVNNFFALFSNSLLVALNILL
ILVLTIMFLVDPDQYRRIFIRLFPSFYRRRVDYILGLCDSALDNWIVGILFNMTVIAVFSGLGLWVLGVDLVLANALIAG
LLEAIPNIGPTLSLIPPMAIALLDAPWKAVAVLILYILIQQLEQYLLVPAVMAKQLSLAPAVTLLSQIVFAIFFGFLGLL
LALPLMVIGQIWVKEVLVKDILDRWGEDERSDSYPTFAPDIVALADGPTQLSADLPTVTPDEEESS
>Mature_385_residues
SLGKWIGLVVFLVSLYILWEIRQVLLLGFTAVVLASALNGLVRQLTKRGLSRGLAVASAIFSIVGVACLIGLLVIPPFVT
QAQELLDRVPDSLTRIEELINEAQETGLAFGMPSAGIEIPVDSLIDNLREKIPAFAESVVNNFFALFSNSLLVALNILLI
LVLTIMFLVDPDQYRRIFIRLFPSFYRRRVDYILGLCDSALDNWIVGILFNMTVIAVFSGLGLWVLGVDLVLANALIAGL
LEAIPNIGPTLSLIPPMAIALLDAPWKAVAVLILYILIQQLEQYLLVPAVMAKQLSLAPAVTLLSQIVFAIFFGFLGLLL
ALPLMVIGQIWVKEVLVKDILDRWGEDERSDSYPTFAPDIVALADGPTQLSADLPTVTPDEEESS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=324, Percent_Identity=25.9259259259259, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI87082271, Length=320, Percent_Identity=24.375, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 42178; Mature: 42047

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLGKWIGLVVFLVSLYILWEIRQVLLLGFTAVVLASALNGLVRQLTKRGLSRGLAVASA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFSIVGVACLIGLLVIPPFVTQAQELLDRVPDSLTRIEELINEAQETGLAFGMPSAGIEI
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PVDSLIDNLREKIPAFAESVVNNFFALFSNSLLVALNILLILVLTIMFLVDPDQYRRIFI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
RLFPSFYRRRVDYILGLCDSALDNWIVGILFNMTVIAVFSGLGLWVLGVDLVLANALIAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLEAIPNIGPTLSLIPPMAIALLDAPWKAVAVLILYILIQQLEQYLLVPAVMAKQLSLAP
HHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVTLLSQIVFAIFFGFLGLLLALPLMVIGQIWVKEVLVKDILDRWGEDERSDSYPTFAPD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
IVALADGPTQLSADLPTVTPDEEESS
HHHCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SLGKWIGLVVFLVSLYILWEIRQVLLLGFTAVVLASALNGLVRQLTKRGLSRGLAVASA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFSIVGVACLIGLLVIPPFVTQAQELLDRVPDSLTRIEELINEAQETGLAFGMPSAGIEI
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PVDSLIDNLREKIPAFAESVVNNFFALFSNSLLVALNILLILVLTIMFLVDPDQYRRIFI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
RLFPSFYRRRVDYILGLCDSALDNWIVGILFNMTVIAVFSGLGLWVLGVDLVLANALIAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLEAIPNIGPTLSLIPPMAIALLDAPWKAVAVLILYILIQQLEQYLLVPAVMAKQLSLAP
HHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVTLLSQIVFAIFFGFLGLLLALPLMVIGQIWVKEVLVKDILDRWGEDERSDSYPTFAPD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
IVALADGPTQLSADLPTVTPDEEESS
HHHCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]